Colletotrichum destructivum: 87950517
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Entry
87950517 CDS
T10409
Symbol
CDEST_14017
Name
(RefSeq) Putative exosome complex RNA-binding protein 1/RRP40/RRP4
KO
K03679
exosome complex component RRP4
Organism
cdet Colletotrichum destructivum
Pathway
cdet03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
cdet03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
87950517 (CDEST_14017)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
87950517 (CDEST_14017)
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NCBI-GeneID:
87950517
NCBI-ProteinID:
XP_062786224
UniProt:
A0AAX4J0Q5
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Position
9:complement(join(3026341..3027166,3027238..3027446))
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AA seq
344 aa
AA seq
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MPITILAPRGTSSHHKPARYTAAADSDSDSDGGADIEGDIPMRPAKRARGDNYDIVTPGE
IITDDPQWMRGHGTYITPTTTEIVSSVAGTVTRTNKLLSVRPLRARYTPEIGDLVVGRIV
EVQAKRWRVDVGSSQLAILQISAINLPGGILRKRTDTDELQIRSFFAEGDLVVAEVQQLH
QDGAASLHTRSLKYGKLRNGVFVAVTGTGGGGGVVRAKRQQWVMDAARGASKVHVTLGVN
GFIWISKHVESDVSESVGLNRMEESVSANVYSSQNDRIDHETMREVARIRSVILALVENG
LRVDEDMVVRGYKEAVDMGLESVEDDIYLGGERGKRLAEALLRE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcctatcacaatcctcgccccaaggggcacgtcttcacaccacaagcccgcacgctac
accgctgccgccgattcagactcggactccgatggtggcgccgacatcgagggcgacatc
cccatgcggccggcgaagcgcgcccgcggcgacaactacgacatcgtcaccccgggtgag
attatcaccgacgatccccagtggatgagaggacacggaacctatataaccccgacgacg
acggaaatcgtctcctcggtcgccggcaccgtcacccgcactaacaaactcctctccgtt
cgccctctccgcgcccgctatacccccgagattggtgacctcgtcgtcggccgcatcgtg
gaagtccaagcgaagcgctggcgcgtcgacgtcggctcgtcgcagctcgccatcctccag
atttccgccatcaacctgcccggcggtatcctccgcaagcgcaccgacacggacgagctg
caaatcaggtcctttttcgccgagggcgacctggtggtggccgaggtccagcagctgcac
caagacggcgcggccagcttgcatacgcggtccctcaaatacggcaagctgcgcaatggc
gtcttcgtcgccgttacgggcaccggcggcggtggcggcgttgtgcgggccaagaggcag
cagtgggtcatggacgcggcacgcggcgcgagcaaggtgcacgtcacgctcggtgtcaac
ggcttcatctggatcagcaagcacgtcgagagtgatgtgtctgagagcgtggggcttaac
cgcatggaggagagcgtaagcgccaacgtgtactcgagccagaatgaccggatcgatcac
gagaccatgcgcgaggtcgcgcggatacgcagcgtcatcctggcgctggtcgagaatggg
ctgagggtcgacgaggacatggtcgtcagggggtataaagaggcggtcgacatggggctg
gagagcgtcgaggacgacatctaccttggcggcgagagggggaagaggctcgccgaggct
ttgctgagggagtga
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