Colletotrichum destructivum: 87950638
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Entry
87950638 CDS
T10409
Symbol
CDEST_14138
Name
(RefSeq) Putative RNA recognition motif domain, tetratricopeptide-like helical domain superfamily
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
cdet Colletotrichum destructivum
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdet03041
]
87950638 (CDEST_14138)
03036 Chromosome and associated proteins [BR:
cdet03036
]
87950638 (CDEST_14138)
Spliceosome [BR:
cdet03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
87950638 (CDEST_14138)
Chromosome and associated proteins [BR:
cdet03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
87950638 (CDEST_14138)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
RRM_Nup35
HAT_Syf1_CNRKL1_N
RRM_PARP14_3
HAT_PRP39_N
RRM_5
COPR5
YqfD
TPR_14
Motif
Other DBs
NCBI-GeneID:
87950638
NCBI-ProteinID:
XP_062786345
UniProt:
A0AAX4J0Q1
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All DBs
Position
9:3481692..3485045
Genome browser
AA seq
1117 aa
AA seq
DB search
MATLPVGEDKWLDYVTENSRHANDLEKRVHVIELFKLAVEAEPNSVRVWRAYCDYFWSLY
IASQSYESGWSDEERHMGCELFSLNAALSLWQQAYEAIQYRISDSHELWDQWISLESGLL
ARSRTAEGIRRITYLYTDRLQVPHVTRDNTAQAFSEFLSTYNKAAWEETMQSITANPKSQ
EAKKLTEDRDMFELKLKEASREGKDEVYRNLLKEYLEWECAQSKRSNKQAEATGDLCRGL
YARALTGVFAFDDTIWNEYVRFLSTSGTYAQSPQGMVDVLRRAVDHCPWSGAIWSRYILT
AEDAKLPFNEIEQIKHKATSNPELYKNGMAALLDMYAGWCGFLKRKAMDLNATDEDVDIA
DMGLRAALEFVDQAKHRYGDSYRGDPNFRLERIYIQYLTEKKRNVDEARSEWHKLAEKQL
YADSYDFWLNYYLWEMMIFASNGKDRSPTPSTAAIGLRVPSVATAVLGRAIKRKSLDWPE
RVIDVYVQHCNDYELPSTVRIAIDTVYETRKEVTKRREREAAQAAEYYAAQAQEQQAAHA
AQTVDADSTSSSKRKREEEADAADVTSSKRPKSEVAEADTALKQQSLKRDRENTSVLVSN
IPAETTKTKIRQYFKEYGHIVDVTDPAIDPQDNTQTVMVEFRTPEEAQSALLRDGKYFGT
SQISVQPGTDLTVYVTNYPPTADKAYIGNLFKDCGEILGIRMPSLKGNVRRRFSYVTFRD
RSASSKATQKHGTVLEGKFKLMAMYSDPTRAKKREGAIEEGRELHITNLDPSAVEDDVQK
AFSKYGTVKRISIPRNKAGKGHGAAYVEMETREQARTAASELDKAKLRSGIMTVQISTPS
NFKRTAAVSKEGASPAPSRDEEGDEMMADSNGDGVARQAGPSRAEIASRTIALLGIPDTV
NDARVKEIVDKVGGFKSLILQPSHGGAKIEFEDEPSAGRAMLQLDGYILDGRKLRTGSVE
ELKHSKGEIRTEKIVYGVGGKKQTDKRAASKNTDSGAPFVPPSTTIKRPVLGNKGGAKRG
LGFMTKAVNAGGSRQGETATSQPEAKVNGATGSGETEARKPMKSNADFKALLLGGTTTAA
AAAAAATPAAATTTTTNTSKEEGVGRNGNGQAGQDHN
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctgccggtaggggaggacaaatggctcgactacgtcactgagaatagtcga
cacgccaacgatttggagaagcgcgttcacgtcatcgagctcttcaagcttgctgtcgag
gctgaaccgaacagtgttcgcgtctggcgcgcatactgcgactacttctggtccctctac
atcgctagccagtcctacgagtcgggatggtcagacgaggaacgccacatgggctgcgag
ctcttctctctcaacgctgccctcagcctctggcagcaggcctacgaagccatccaatac
cgtatcagcgacagccacgagctgtgggatcagtggatctctctcgagagcggccttctc
gcccgctcgcgcaccgccgagggcatccgacgcatcacctacctgtacaccgatcgcctg
caggttccacatgtcacccgcgacaacactgcgcaagccttctccgagtttctgtcgact
tacaacaaggctgcctgggaggagacgatgcagagcataaccgccaaccctaagtcacaa
gaggccaaaaagcttaccgaagatcgcgacatgttcgaattgaaactgaaggaggcctcc
cgcgaagggaaagacgaggtttaccgcaacctgcttaaggaatatctcgaatgggaatgt
gcccagagcaagcggagcaacaagcaggctgaggctactggcgatctctgccggggtctc
tatgccagggccttgaccggcgtctttgccttcgacgacaccatatggaacgaatacgtc
cgcttcttgtctacatctggcacttatgcccagtcaccgcaaggaatggtggatgtgtta
cggcgggccgttgatcactgcccttggtcgggcgcaatctggtcgcgctatattctgacg
gccgaagacgccaagctccccttcaatgaaattgaacaaataaagcacaaggccaccagc
aaccccgagctttataagaacggcatggccgcacttctcgacatgtacgcgggctggtgc
gggttcctcaagcgcaaggccatggatcttaacgccaccgatgaggatgttgacattgcc
gacatgggactgcgcgctgcccttgagtttgtcgaccaagcaaagcaccgctacggtgac
agctacaggggggaccccaacttccgcctggagcgcatctatattcagtacctgacggag
aagaaacgcaacgtcgatgaggcgaggagcgagtggcacaaattggcagagaagcagctg
tacgccgacagctatgacttctggctcaattactacttgtgggaaatgatgatcttcgca
tccaacggcaaggaccgtagccctacgccgtccactgccgcgatcggcttgagggtgccg
tcggtggctacggccgtgcttggacgagcaatcaagagaaagtcactggactggcccgaa
agagtcattgacgtctacgttcagcactgcaatgactatgagctcccgagcacggtccgc
atcgccatcgacacagtctacgaaacccgcaaagaagtgacaaagcggcgagagagggag
gcagcacaggccgcagaatactatgcagcccaggcccaagaacaacaagcagcccacgca
gcccaaacggtggatgctgactcgacttccagctccaaacgaaagcgggaagaggaagct
gatgcggccgatgtgacgtccagtaagagaccaaaaagcgaagtcgcggaggcggacacg
gcactcaagcagcagagtctgaaaagagaccgagaaaatacttcggtgctcgtcagcaac
atccctgctgagaccaccaaaaccaagatacggcagtatttcaaggagtacggccacatt
gtcgacgttacagacccagccattgaccctcaagacaacacccagacagtcatggtagaa
ttcagaactccagaggaagcgcagtcagcactgctcagagacgggaagtactttgggacg
tcccagatcagcgtgcagcccggcactgatttaaccgtctatgtcaccaactacccgccg
actgcggacaaggcatacatcggcaacctcttcaaagactgcggcgagattctgggcatc
agaatgcctagtctgaaggggaacgtacggcggagatttagctacgtcacgttccgtgac
cgttctgcctcgtccaaagccacacagaaacacggtactgttctagaaggaaagttcaag
ctgatggctatgtactccgacccgacccgtgcgaaaaagcgtgaaggagcgatcgaggaa
ggtcgcgagctgcacattaccaacctggacccttcggccgtcgaagacgacgtccaaaag
gccttctcgaagtacggtaccgtgaagcgcatcagcatcccgcggaataaggccggcaaa
ggccatggcgcggcatacgttgagatggaaaccagggagcaggccaggactgctgcttcc
gagctcgacaaggctaagctgcgcagcggcatcatgaccgtacagatctccacgcccagc
aacttcaagaggacggcggccgtctcgaaagagggcgcctcccctgccccaagtcgcgat
gaggagggcgatgaaatgatggcagacagcaatggcgacggcgtcgcccgtcaggctgga
cccagccgggctgagattgcctcgcggaccatcgccctcctgggcatccccgacacggtc
aacgatgcacgagtgaaggaaattgtggacaaagttggcggcttcaagagcctcattctg
caacccagtcatggcggcgccaaaatcgagtttgaagatgaacccagtgctggccgcgca
atgcttcagcttgatggctacatcttagacggccgcaaactacgcactgggtccgtcgag
gagctcaagcattccaagggggagattcgcacagaaaagatcgtctacggtgtcggcggg
aagaagcagaccgacaaacgtgcagcatccaagaacactgacagtggtgctcccttcgtt
ccgccatccaccaccatcaagcggccagtgttgggcaacaagggcggtgctaaacgagga
ctgggcttcatgaccaaggccgtgaacgcgggagggagcaggcagggagagacagcaacc
tcacaaccggaagctaaggttaacggtgctaccggtagcggggagaccgaggctcggaaa
ccaatgaagagcaacgccgacttcaaggcgctcctcctgggtggtaccactactgctgct
gctgctgctgctgctgctactccagcggctgctacaacaactacaactaatacgtccaaa
gaagagggcgtgggaaggaatggcaacggccaggctgggcaagaccataattaa
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