Colletotrichum destructivum: 87951177
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Entry
87951177 CDS
T10409
Symbol
CDEST_14677
Name
(RefSeq) Putative transcription initiation factor IIE subunit alpha, TFIIEalpha/SarR/Rpc3 HTH
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
cdet Colletotrichum destructivum
Pathway
cdet03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
87951177 (CDEST_14677)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdet03021
]
87951177 (CDEST_14677)
Transcription machinery [BR:
cdet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
87951177 (CDEST_14677)
Prokaryotic type
Archaeal type
TFE
87951177 (CDEST_14677)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
zf-CCHC_2
PHD_P300
Zn_ribbon_Dof
DUF4407
Motif
Other DBs
NCBI-GeneID:
87951177
NCBI-ProteinID:
XP_062786884
UniProt:
A0AAX4J2M1
LinkDB
All DBs
Position
10:complement(join(1333355..1334381,1334441..1334536,1334589..1334695))
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AA seq
409 aa
AA seq
DB search
MAQPLDLAKTLVKSVMRAFYETRHILIIDALIIHSALRDDDLAYLMATNTKDLHKACGKL
REDRFLAVYTRLEYREDPKNPEAKPRPVNRTYYYIDYRQTIDAIKWRVYTVDKQIQGTTV
PASERKEYFCGRCKSEWTQMEVLDNVGPEGFVCHRCGAPLTHDLERNSTGHEQSTRLNNQ
FKFITELLPRIDEMVVPDNTFDIAISKALPVVRDASYQSVTTIPVSSLQPTSVKGLDNVG
PKSMSVSISTSDGPSEAEKAAEKARKEKVAQQNALPSWMSNSTVTGESFSAQAGPTAAAK
IEETDDKDTVIKSADNPEHAELDDYFARLKAEQEAEAARAMEEEEDDDDEDEEEDAFEDV
TPSIATPAPLIKTEPSPDSEERVVKKVKVEAPADGDDGESDEDMEFEDV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagccgttggatctcgcaaaaactctagtcaagtctgtcatgcgcgccttctac
gaaacgcgccacattctaatcatcgacgctttgatcattcactctgcgcttcgtgacgat
gacttggcttacctgatggcgacgaatacaaaggatctccataaagcatgcggaaagctc
agggaagatcgctttctcgcagtatacacaagattggaatatcgcgaagaccccaagaat
cccgaagcgaaacctcgtcccgtcaaccgaacatactactacatcgactaccgtcagacc
atcgatgccatcaagtggcgtgtgtacaccgtcgacaagcagatacagggcaccacagtg
ccagcgagcgagcgcaaagaatacttctgtgggcgctgcaaatcggaatggacgcagatg
gaggtgctcgataatgttggccccgagggcttcgtttgtcaccggtgcggcgctccgctc
acccacgatcttgagcgcaactcgaccggccacgagcaatcaacacgacttaacaaccaa
ttcaagttcatcaccgaacttctgccacggatcgacgagatggttgtacctgacaatacg
ttcgacattgcaatcagcaaagccctgcccgtcgtccgcgatgcgagctaccaatccgtt
acaaccatacccgtttcatccttgcaacccacatcagtcaagggcctcgataacgtcgga
cccaagtcaatgtctgtcagcatctccacatcagacggaccatcagaggcagaaaaggca
gcggagaaggcgcgcaaagagaaggtcgcacagcagaatgcgcttccatcgtggatgtcg
aacagtaccgtcactggcgagtctttctcggcccaggcaggtccgacggctgccgccaag
atagaagaaacggatgacaaggacaccgtgatcaaatcagcagacaacccagaacacgca
gagctggacgattacttcgctcgcctcaaggctgagcaggaggccgaagcggcaagggcg
atggaggaagaagaggacgacgacgatgaagatgaagaggaggatgcttttgaggatgtg
acgccaagtatcgcgaccccagctccgcttatcaagacggagccatcacctgactcggaa
gaaagagtagtcaagaaggtcaaggtagaagcacccgcggatggagatgatggcgagagc
gacgaagacatggaattcgaggacgtctag
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