Colletotrichum destructivum: 87951870
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Entry
87951870 CDS
T10409
Symbol
CDEST_15370
Name
(RefSeq) Putative DNA-directed DNA polymerase, family B, exonuclease domain, ribonuclease H-like superfamily
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
cdet Colletotrichum destructivum
Pathway
cdet03030
DNA replication
cdet03410
Base excision repair
cdet03420
Nucleotide excision repair
cdet03430
Mismatch repair
cdet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
87951870 (CDEST_15370)
03410 Base excision repair
87951870 (CDEST_15370)
03420 Nucleotide excision repair
87951870 (CDEST_15370)
03430 Mismatch repair
87951870 (CDEST_15370)
03440 Homologous recombination
87951870 (CDEST_15370)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdet03032
]
87951870 (CDEST_15370)
03400 DNA repair and recombination proteins [BR:
cdet03400
]
87951870 (CDEST_15370)
Enzymes [BR:
cdet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
87951870 (CDEST_15370)
DNA replication proteins [BR:
cdet03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
87951870 (CDEST_15370)
DNA repair and recombination proteins [BR:
cdet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
87951870 (CDEST_15370)
MMR (mismatch excision repair)
DNA polymerase delta complex
87951870 (CDEST_15370)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
divDNApol
Phage_gp38
Motif
Other DBs
NCBI-GeneID:
87951870
NCBI-ProteinID:
XP_062787577
UniProt:
A0AAX4J4C2
LinkDB
All DBs
Position
11:complement(join(865437..865670,865721..866258,866457..866902,866954..867194,867246..868108,868178..868675,868845..868883))
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AA seq
952 aa
AA seq
DB search
MRAEAIKTSDTGGAVDPDLIIGYNIANFDFPYLLARARHLGVGNFEHWSRLLGVASKAKD
TNFTSKQIGSRDSKSTNTNGRLQLDLLQLVQLDHHLRSYTLNSVCSHFLGEQKEDVHYTM
ITELFNGSPETRRRLALYCLKDAYLPQRLIDKLSCLENYTEMARVTGVPFNYLLARGQQE
ANDEQYEGATVIEPKRGFYDVPIATLDFASLYPSIIQAHNHCYTTLVNNKAIETLNLEKD
DDYIVTPSGATFLTTKQQKGLLAQILDELLTARKQAKRELSVEKDPFKKAVLNGRQLALK
ISANSVYGLTGATTGKLPCLEIASSTTAFGRKMIERTKEEVENLYTIANGHSHDAEVIYG
DTDSVMVKFGTKDLSEAMRLDEEAARLVSSKFITPIKLEFEKVYYPYLLINNKRYAGLYW
TNLKAYDKMDTKGIETVRRDNCLLVQTVIDKVLRMILIDQDVSGAQEYVKDTIANLLQNK
IDMSKLVITKALTKDDYAVKQAHVELAQRMRKRDAGSAPGLGDRVAYVMIKGAAGSKNYE
KSEDPIYLAKPLGRIFEPILGESKANLLLSGAHTRTISVAAPTVGGLMRFAKRTLTCMGC
KKPLADKEENAGAVCSSCAPRVGELYKKTLDVVSSSEVRFGRLWTQCQRCQGSLHCEVIC
SSKDCPIFYMRMKAKKDLEDAGKELKRFDFDQASVWSLPNANEMENSEAKTKTTFLQMLV
LYGLLINPMDEGLRDLDHAALVGILEAKAKAPPPNQKELHLIAILHCVLDLAGGKFSNTS
SIEEVDHAFTFAENLQLCGHFLGIQPSDNHYCRIDFAEEIKSLATAQRDPTNKVQTVEIL
ATISAFGQEDDLHQRPLELLRDLQSLDVLLPFETLAEIPDQLTMHLNPHEAASLNDFVTE
TKNLRILSSPKCGSWTFLLWASTHAKPAFNSEITKWMQNSEVLPLFRFALFR
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgagagcagaagccatcaagacatcggacacaggcggagccgtcgatcccgatctcatc
ataggctacaacattgccaatttcgactttccctatctgctcgcccgagcgaggcacctc
ggcgtggggaacttcgagcactggtcacgcctccttggcgttgcctccaaagcaaaagat
accaacttcaccagcaaacaaataggaagtcgagactcaaaatccaccaacacaaatggt
cgactacagctcgatctgcttcaactagtgcaacttgatcaccatctccgcagctacacc
ctgaactctgtctgctcccatttcttaggcgagcagaaagaagacgttcactacacaatg
attaccgagcttttcaatgggagccccgaaacgcgacgtcggctggctctctattgcttg
aaggacgcttacttgccccaaagactgatagacaagctctcatgccttgagaactacact
gagatggcaagagtcaccggtgtaccgttcaattatttgttggcgagaggtcaacaggaa
gccaatgatgagcagtacgaaggtgccacagttatcgagcccaaacgcggattctatgat
gtgccaatcgccacgctggattttgcatccctttaccccagtatcatacaggcgcataac
cactgctacaccactttggtcaacaacaaggccattgagacgctcaatcttgagaaagat
gacgactacattgtcactccgtcgggtgccacatttttaacgacaaagcagcaaaaagga
ctgctagctcagatcctggatgaactgctcaccgcaaggaaacaggcgaagcgagaactc
tcggtggagaaggatccgttcaaaaaggcagtgttgaacgggaggcagctggcgttaaag
atcagtgccaactccgtatatggcctaactggtgccacaactgggaagcttccgtgcctt
gagatcgctagtagcacgactgcctttggccgaaagatgattgagaggacgaaggaagag
gtcgagaatctttacaccattgctaatggtcattctcacgacgctgaagtcatttacggt
gacaccgactcggtcatggtcaagttcggcaccaaagatctctccgaggcgatgagactg
gacgaagaggcggctaggctcgtatcctccaagtttatcacgccaatcaagcttgaattt
gaaaaggtttactatccatatctgcttatcaacaataagcggtacgccggcctgtactgg
accaatttgaaagcgtacgacaagatggacacgaagggtatcgagacggttcggagagat
aactgtttgttagtgcaaactgttatcgacaaagttctcagaatgattctcatcgaccag
gacgtctcgggtgcccaagaatacgtgaaagatacgatcgcaaacctgttacaaaacaaa
attgacatgtccaagctcgtcattaccaaagcgttgaccaaggatgactacgcagtcaag
caagctcatgttgagcttgctcaacggatgaggaaacgcgatgctggctcagcgcctggc
cttggtgaccgggttgcgtatgttatgatcaagggtgcggccggatccaagaactatgag
aagtcagaggatccgatctaccttgcgaagcctttgggcaggattttcgagccgatccta
ggggagtcaaaagccaacttgctactttcgggagcacacacacggactatttcagttgcc
gcgccgaccgttggtgggctaatgagattcgcgaagagaacactgacttgtatgggctgc
aaaaaacccttggcggacaaggaggagaacgctggcgcagtgtgctcgagttgcgcaccc
agggtcggtgaactgtacaagaaaacactggacgtggtgtcaagctcagaggtgcggttc
ggacgattgtggacacaatgtcaacggtgtcagggcagcttgcactgcgaggtaatttgc
agtagcaaggattgtcctattttttacatgagaatgaaagcgaagaaggatctcgaggac
gcagggaaggagctcaaacggtttgactttgaccaggcatctgtttggtccctgcctaac
gctaatgaaatggagaactctgaggcaaagacgaaaacaacctttcttcagatgctcgtc
ttgtatgggctcctgataaaccccatggacgagggcttgagggacctcgatcatgcagca
ctggttggcatactagaagcgaaagcgaaagcaccaccgcccaatcaaaaagagctccat
cttatcgcgattctgcattgcgttctggatttagctggtggtaagtttagcaacacgtcg
tcaatcgaagaggttgaccatgctttcactttcgccgaaaacctacaactttgtgggcac
tttctgggtatacagccctcggacaatcattattgcagaattgattttgcagaggaaatt
aaatctctggcaacagcacagagagacccaacaaacaaggttcaaaccgtggaaatcctt
gccaccatttcggcattcggccaagaggacgatctgcatcagcgcccccttgagctactg
agagacctccagagtttggatgttcttctgccgtttgagacgttggcggaaatcccagac
cagttgactatgcacttgaacccgcatgaggccgcaagtcttaatgacttcgtcaccgaa
accaaaaatctccggatattatcctctcccaagtgtggttcttggacgtttctactctgg
gcctctacccacgccaagcccgctttcaactcggaaataactaaatggatgcaaaactct
gaggttttgccgttattcagattcgccttattcaggtaa
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