Colletotrichum destructivum: 87951881
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Entry
87951881 CDS
T10409
Symbol
CDEST_15381
Name
(RefSeq) Putative transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
cdet Colletotrichum destructivum
Pathway
cdet03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
87951881 (CDEST_15381)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdet03021
]
87951881 (CDEST_15381)
Transcription machinery [BR:
cdet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
87951881 (CDEST_15381)
Prokaryotic type
Archaeal type
TFE
87951881 (CDEST_15381)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
Rota_VP4_MID
Motif
Other DBs
NCBI-GeneID:
87951881
NCBI-ProteinID:
XP_062787588
UniProt:
A0AAX4J474
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All DBs
Position
11:join(911027..911121,911176..911274,911385..911808)
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AA seq
205 aa
AA seq
DB search
MENARTIVRQAVRAIYSPEQVVIVDTLSRHEILSMTQLRSLSITDDHRSLRKSCAELERD
RIVCTRQLSEDESYVFIDYYQAVHVIHYMIYEIGRQIQEANVRESTAEIVRRYICPICTT
KCDLIDVIDNVDCDGSFLCKRCVTPSILFEEPVKPDLLPRFNDQFAPFLLVLQRLDSSSI
PRVTFEGLYAQKFPDGDGASKRQCL
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgccagaacaatagtcagacaagccgtgcgtgcaatttacagccccgaacaa
gttgtcatagttgacaccttgtcgcgccacgaaatcctttcaatgactcaactgcgctcg
ctgtctattacagacgatcacagatctctgagaaaatcctgcgctgagcttgagcgtgac
aggatcgtgtgtacgcgacagttgagcgaggatgagtcatacgtctttatcgactattat
caagctgtccatgtgattcattacatgatctacgaaatagggcgccagattcaggaagcg
aacgtgcgcgagtcaacagcggagattgtgaggcgctacatttgtcccatttgcaccacc
aagtgtgatttgatcgatgttatcgacaatgtagactgcgacggtagctttctatgtaag
cgatgtgtgactccaagcattctattcgaagaaccggtcaaaccagacctgctgccacgc
ttcaacgaccaattcgcgccttttttacttgtacttcagcgtctcgacagcagcagcatt
ccaagagtgacttttgaaggtctctatgcgcagaaattccccgacggcgatggcgcttct
aaacgacagtgcttgtag
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