Colletotrichum destructivum: 87952002
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Entry
87952002 CDS
T10409
Symbol
CDEST_15502
Name
(RefSeq) Putative TATA-box binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
cdet Colletotrichum destructivum
Pathway
cdet03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
87952002 (CDEST_15502)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cdet03000
]
87952002 (CDEST_15502)
03021 Transcription machinery [BR:
cdet03021
]
87952002 (CDEST_15502)
Transcription factors [BR:
cdet03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
87952002 (CDEST_15502)
Transcription machinery [BR:
cdet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
87952002 (CDEST_15502)
RNA polymerase III system
TFIIIB
87952002 (CDEST_15502)
RNA polymerase I system
SL1/TIF-1B
87952002 (CDEST_15502)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-GeneID:
87952002
NCBI-ProteinID:
XP_062787709
UniProt:
A0AAX4J523
LinkDB
All DBs
Position
12:complement(226411..226929)
Genome browser
AA seq
172 aa
AA seq
DB search
MGNRLRGHHKPRFAALIMRIREPKTTALIFASDKMVVTGAKTQRDAWAACRKFSQTLQKP
GFPTEIADFKIQNIVSSFDCKFPIRLEGIAVAKFGSVSYEPELIPGLVYRLQAPKVVVLI
FASGKVVLTGAKSKDDISGAFDAIRPLLQSLLLIICMPSHRLIDRTRFQSFP
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatcgtttgagaggtcaccataagccgagatttgcggcactcatcatgagaatt
cgggagccaaaaacgacggcattgatctttgcttctgacaagatggtcgtcaccggagcc
aagacgcagcgtgatgcatgggcagcgtgtagaaagttcagtcaaactcttcagaaacca
ggatttccgacagagatcgcagacttcaaaattcagaacattgtttcttcgttcgactgc
aagttcccgattcgattggaaggcattgccgtggccaagttcggatcggtttcgtacgag
cctgaactcattcccggcctcgtataccgactgcaggcacccaaagtcgtcgtgctgata
tttgcaagtggcaaggtcgtgttgaccggcgctaaatcaaaagacgatatctccggagcg
ttcgatgcgatacggccgttgttgcaaagtttgttgctcattatctgtatgccaagccac
aggctaatcgaccgcaccaggtttcagagttttccatga
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