KEGG   Cryptococcus deuterogattii: CNBG_0133
Entry
CNBG_0133         CDS       T09796                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
cdeu  Cryptococcus deuterogattii
Pathway
cdeu03020  RNA polymerase
cdeu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cdeu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CNBG_0133
  09124 Replication and repair
   03420 Nucleotide excision repair
    CNBG_0133
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cdeu03021]
    CNBG_0133
   03400 DNA repair and recombination proteins [BR:cdeu03400]
    CNBG_0133
Transcription machinery [BR:cdeu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     CNBG_0133
DNA repair and recombination proteins [BR:cdeu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CNBG_0133
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L
Other DBs
NCBI-GeneID: 88176383
NCBI-ProteinID: XP_062880299
LinkDB
Position
4:1113078..1114113
AA seq 162 aa
MNQPNRVDSWLLQDDEKPLTITEDPKLPNASTIVIRRQDHTLGNMLRAQLMLDPTVLFAG
YKVPHPLENDILLKIQTDERSNPAEALKRACHELIRQTVHIKAQFQQQAKNIEMGMGPEQ
GGAPGAAGANGAYDPYGDGFGREGNVVVGGAAREQGQDVYDF
NT seq 489 nt   +upstreamnt  +downstreamnt
atgaatcagcctaatagggttgactcgtggttattacaagatgatgagaagccattaacg
atcacggaggatcccaaactgcccaacgcttccactatagtcatacggcgacaggatcat
acattgggaaacatgcttagagcacaattaatgctcgatcccactgtcctattcgcaggc
tacaaagttccacatcccctcgaaaacgacattcttctcaaaatccaaactgatgagcgg
tcgaaccctgccgaagctctgaaacgtgcatgtcatgaactgatccggcaaactgtacac
atcaaagctcaattccaacagcaagcaaagaacatcgagatgggtatgggtcccgaacaa
ggaggcgctcctggtgcagcaggcgcgaatggagcgtatgatccgtatggggatggattc
gggagagagggcaatgtggtcgtcggcggtgcagcgagagagcaggggcaggatgtatat
gacttctag

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