Cryptococcus deuterogattii: CNBG_0160
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Entry
CNBG_0160 CDS
T09796
Name
(RefSeq) mRNA 3'-end-processing protein RNA14
KO
K14408
cleavage stimulation factor subunit 3
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CNBG_0160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdeu03019
]
CNBG_0160
Messenger RNA biogenesis [BR:
cdeu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
CNBG_0160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
PT
HAT_Syf1_CNRKL1_N
TPR_14
TPR_2
TPR_8
Motif
Other DBs
NCBI-GeneID:
88176408
NCBI-ProteinID:
XP_062880324
UniProt:
A0A095C0U9
LinkDB
All DBs
Position
4:1031614..1035305
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AA seq
1069 aa
AA seq
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MSEENPTDIVHQLQSIDSIEQDLADTAAAVVDAASQSHPPQHAAQDQKFQSTLLDNAEAI
ESVLESAIPPAPGSSSTAGASDAIGDNSFTTSGPAPFPDPVVAPSAANDEIGDVIVVETE
TPTTTNVVEAVVNSENDGDIPIESTEQSSEQPTEQPTEQPTEQPTEQPTGQPTEQPAVEI
PLAPQSTPAAPATSAVENVSITLEDTQHEQIVQAPVRIAHTEGPTLVVDMKTEEKPLIEH
ATWIPPQEIQSDVFLPEGLTEYSPSVSQNGELIKSWRADPSNPTLLLSLFNWAVQKTEVE
DARAWYRVLAVDNPTATQPLLALINLELALSNFAEVEAIFASTLKGSAGITTAADVSIWT
AYLHYIRRQNPLTEGSANAADVRSTITEAYEFALRECGFDRESGDIWDEYIKFVATGPAT
NQWETQAKNDNLRKIYQRAVCIPLNNIEALWKSYDNFESSLNKLTAKKYLAEKSPAYMTA
RTALRELRALSDPIPKPILPPYPTFTEQDRLIVGAWKAYLRWEEGNPLVIENHTMLQSRI
GYALRKCLGEMRHFAELWHYVASYYSKLGKQDEAAEILEAGVNACPKSFLLTFAYAELQE
ERKAFLTCHSLYTTLISKLNPEVDELRQSVAREVEIARGPPIPGSEKAAAAAAVGDSIDV
DGNDISDIQRLVEEREQRGELVAQRRGKDIEELMIGISVVWIMYMRFARRAEGIKAARGV
FGKARKSPHLTWHVFEASALMEYHTNKDAAVAIRIFELGLKQFSEDVDYVIKYLQFLLSI
NDDNNARALFERSAVRVTGDKARPLWDAWARYEYTYGDLSAVHKLEARFSEVFPEDAPLK
RFAQRWSYNGIDQIAIRDLGFNRARMGVPILPASTIAPTLPPPTASITAPVVVPAPVQPP
QESYKRPAPEDITPRQPSSTEFSRSPKRHRAQSPPRRYAERDDRPPAGRYRDSLPPVKAP
SSIPPAHLGAGSTFATPPSGGYGGDKDRSGLEKPLAWFMAQLPNARSFDGPIFRPDDIMK
LFGGLSLPGAGMPPAPPISRGPAQPPMQSRGYYEPERDRRYGGNRGGRY
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaaaatcccacagacatcgttcaccagctgcaatcaatagactccattgag
caagacctcgcagacacagctgctgccgtcgtcgatgctgcctcccaaagccatccccct
caacatgctgcacaagatcaaaaattccagtcgaccttgctggacaatgcagaggcaata
gagtctgtccttgaaagtgccataccgccagctccaggctcatcatccaccgcgggcgca
tctgatgccattggagataacagttttaccacgtctggtcctgctccttttcccgacccc
gtcgttgcgccatctgctgcaaatgacgaaattggagacgtgattgtcgttgaaaccgaa
actccaacaactacaaatgtcgtagaggcagttgtaaactcagaaaatgatggtgatatc
ccgatagagtccacagagcagtcctcagaacagcccacagaacagcccacagaacagccc
acagaacaacccacagaacagcccacaggacaacccacagaacaacctgctgtcgaaata
ccgcttgcgccccaatccactcctgctgcacctgccacatctgccgttgagaatgtctcg
attaccttggaagatactcagcatgagcaaatagtgcaagcacctgtccgaattgctcat
acggagggtccgacgcttgtggtcgacatgaaaacagaagaaaaacctctgatagaacac
gccacatggataccacctcaagaaatccagtctgatgtcttcctcccggaaggtctgacg
gaatattctccaagtgtgagccaaaacggcgaactgataaaatcttggcgtgctgatcct
agcaacccgactttgttactttctcttttcaactgggccgttcaaaaaacagaggtggag
gatgctagggcttggtatcgggttctggcggtggataatccgactgcgacccaaccgctg
ctcgctttaatcaatttagagttagccctttccaactttgccgaagtagaggccatcttt
gctagtacactcaagggaagcgctgggatcacaaccgcggctgacgttagtatttggacg
gcgtatctccattacatccgacgacaaaatcctcttactgagggttcagccaatgctgct
gatgtcagatcaacgatcaccgaggcctacgagtttgcgctccgagaatgtggatttgac
cgagagagcggagatatctgggatgaatacatcaagtttgttgcaactggtcctgctacc
aatcaatgggaaacgcaagccaaaaatgataaccttcgaaagatctatcagcgagctgtt
tgcatacccctcaacaatattgaagccctatggaagtcttacgacaattttgaatcatct
ctcaataagcttacagccaagaaatatctcgccgagaagtctcctgcttatatgacagct
cgtacggcccttcgtgagcttcgtgcgctttcggaccccatccctaaaccgatattaccc
ccgtatcccactttcacagaacaggacagactgattgttggtgcttggaaagcatatctg
agatgggaagaagggaatccactggttattgagaatcacacgatgttgcaatccaggatt
gggtatgcattaagaaagtgtttgggtgagatgagacattttgcagagctttggcactac
gtggctagctattactccaagttgggtaaacaagacgaggctgcagagattctcgaagcc
ggtgtgaacgcttgtcctaaaagctttcttctcacgtttgcctatgctgaacttcaagaa
gagcgcaaagctttcctgacttgtcattcactctatactaccctcatctctaagttgaat
cctgaagtcgacgagctccgccaaagcgtcgctcgtgaagttgagattgctcgcggcccc
cctatccccggatctgaaaaggctgcagcagccgccgccgttggtgacagcattgacgtt
gacggtaatgatatcagtgatatccagaggctcgtagaagaacgagaacagagaggggag
cttgtcgctcaaaggagagggaaagatatcgaagaactgatgattggcataagtgtggtg
tggataatgtacatgaggtttgctcgcagggcagagggtatcaaagccgctagaggggta
tttggaaaggctcgaaagtcacctcatctcacgtggcacgtatttgaagcatcagcttta
atggaatatcacaccaataaggacgctgctgttgctattaggattttcgagttgggtttg
aagcagttctccgaggatgttgattatgtgatcaaataccttcagttccttttgtcgatc
aacgacgataacaacgctcgagctctctttgaacgttcggctgtcagggttactggcgac
aaggctcgacctctgtgggacgcttgggctcgctatgaatacacgtacggtgatctgtct
gcggtacacaaacttgaagctcgtttctctgaagtctttcccgaggatgcccctctcaag
cgttttgcgcaaagatggtcgtataacggaatcgatcaaattgctattcgggatcttggc
ttcaaccgtgctcgaatgggcgttcctatacttcctgcatccaccatcgcccctacgctt
ccgccgcctactgcttctattaccgcccctgttgttgtccctgccccagtacagcctcct
caagaatcctataaacgtcctgctcccgaagatatcaccccacgacagccttcctctaca
gaattctcccgttccccgaaacgtcatcgggcacagtctccccctcgccgttatgctgag
cgtgatgaccgtcctcctgcaggccgatatcgtgattcactcccgcctgtcaaggctcca
tcaagtattccaccagctcatcttggtgcaggatcaacatttgcaacgcctcccagtgga
ggatatgggggcgacaaagataggagtggtctagaaaagcctttggcatggttcatggca
caactgcccaatgctcgttcatttgatggtcctattttccgtcctgacgatataatgaag
cttttcggcggactttctctgccaggtgcaggtatgccgcctgcacctcctatcagcaga
ggtcccgcccaaccgcctatgcaaagtagaggatattatgaacctgaaagggacagaaga
tatggaggaaacagaggcggaagatactga
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