Cryptococcus deuterogattii: CNBG_0166
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Entry
CNBG_0166 CDS
T09796
Name
(RefSeq) cohesin complex subunit psm1
KO
K06636
structural maintenance of chromosome 1
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu04111
Cell cycle - yeast
cdeu04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
CNBG_0166
04113 Meiosis - yeast
CNBG_0166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cdeu03036
]
CNBG_0166
Chromosome and associated proteins [BR:
cdeu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
CNBG_0166
Meiosis-specific proteins
Cohesin complex and associated proteins
CNBG_0166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_23
AAA_15
IFT57
ABC_tran
SbcC_Walker_B
DUF1664
DUF1515
Motif
Other DBs
NCBI-GeneID:
88176414
NCBI-ProteinID:
XP_062880330
LinkDB
All DBs
Position
4:1007576..1012463
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AA seq
1236 aa
AA seq
DB search
MPLKRLELYDFKSYRGKQVISFGDAPFVSVIGPNGAGKSNLMDAISFVLGVKSAQLRSTQ
LKDLIYRGRRAATREVGSETQTQTESGDDPSDARSAWVMAVYMDDAGKDWTFRRSVSMSG
FSSYFLDGRSVAWKDYNAQLAKFNILVKAKNFLVFQGDVEGVASQDSKALARLIDRISGS
LDLAPSYEAAKAAQEKATEASSMNYARKRSMLTEAKHFREQQEEIKQWERLNDSKDALTQ
RLILWRLYHLTNKISQSTQKVEEASGRLAEFRAASSEADSRLSDVKREQAKAQLNVKKRE
ANLKKAEKAYEDKKPDLVAIDTQIAHSEKRASGAAAQEEKVKRDEKRQADTVKELEKGLE
QITKNMEEAGERQRQRSQASGITLSEADLNEYRQLRASANLHAVQERQQLETLRREQKNL
RDALASVEDQMQQAQRQREKLAGEVDSLGEREETMTAKMNEMNDERERIKGQLDHAQAER
RRINMRETEINERLQDTYHKLLQAGADRRENERETRLKETLASLKRIFPGVHGRVVDLCR
PVATKYDTAVMTVLGKNIDAVVVEHEKVAIDCIEYMRNQRAGQATFIPLDTIQVKPVPER
LRNFARGARLAIDCIEYDPAVERAMQHACSSSLICDTMDIARYVCYERAQEVKAVTLDGT
VIHKSGLITGGQGAGGGRKFDDKEVEGLNKLKETYLAQLQELYRSKPQDKGDEALLESLS
RLDAESNIAKDDLHAIQVRLRGVREELTHAISTIERLTPDVGARSQSAASSEERSAALVE
IIEQADDEVFSAFCQRIGVSNIREYEDVQLRIAKEANEAMESFAAQQARVKHQIDFESSQ
LRNTRERIAHLRDLATKAENSVTELRSQREEIQGELESLRAEIDRQRGKLNDANDVRDEV
VRRVDEMRERSRKAQKTLDRAIKEIATWNDEISKYASDRHAIYRRCRLEEIDLPLIKGRL
DKVPIEEPTKDEDGIMEDEKATQKPVEVDDYGLEPDFDILEEEDRANEDEEVGREFEAQI
SKMRNDLERLVPNMKAVERLDEVERELDDAEREAEETRKESKRAKDDFQAIKKKRCDLFN
KAYNHMSEVIDKIYKDLTKSQNQVGGTAWFTLEEAEEPYLSGVNYSTMPPGKRFAEMEQL
SGGEKTMAALALLFAIHSFHPAPFFVLDEVDAALDATNVQKLSRYIRSQADRNVQFLIIS
LKSTLYEKADGLVGVYREQEQNSSMTLTLDLRKYGN
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcaaacggttggagctatacgacttcaagtcgtatcgaggaaaacaggtcatc
tctttcggcgatgctcctttcgtctcagtcataggtccaaatggcgctggcaagtctaat
ttaatggatgccatctcttttgttttaggagtcaaatcagcgcagctccgatcaacccaa
cttaaggatttgatctatcgtggaagaagagctgcaactcgagaagtggggagtgaaact
cagacacagactgaaagtggagacgatcccagcgacgctaggtctgcctgggtaatggcg
gtctatatggatgatgctggtaaagactggaccttccgccgcagtgtgtctatgtcggga
ttctcctcttattttttggatggaagatccgttgcttggaaagactacaatgctcaactt
gccaagttcaatatccttgttaaagcaaaaaactttttggtattccaaggcgatgttgaa
ggggtggctagtcaggatagtaaagctcttgctcgtttgatcgaccggataagcggttct
cttgacctggctccctcttatgaagcggctaaagctgcccaggagaaggccacagaggcg
tcctcaatgaactatgcgaggaaaaggagcatgctcacagaagccaaacattttagagag
caacaggaggaaatcaaacagtgggaaagacttaacgactccaaggacgccttgacgcaa
cgcctcatactgtggagattatatcacctcaccaacaagatcagccagtctacccagaag
gttgaggaagcaagtggtcgtctagctgagttcagagccgccagtagtgaagccgacagc
agactatctgatgtcaagagagagcaagccaaagcgcagctaaatgtcaagaaacgcgaa
gcgaatctcaagaaagcggaaaaggcctatgaagacaaaaaacccgatctagtggccatc
gatacccagatcgctcattccgagaaaagggcgagcggtgccgctgcccaggaagaaaaa
gtaaagagggatgagaagaggcaggcagacacggttaaagagctcgagaagggtttggag
cagattacgaaaaatatggaggaggccggagagaggcagcggcaaagaagtcaagcttcg
gggataactctgtcggaagctgacttgaacgagtatcgccagttacgcgcatccgctaat
cttcatgctgtccaagaacgtcagcagcttgaaacgcttcggcgtgaacagaagaacctt
agagatgctcttgcttcggtggaggaccagatgcagcaagctcagcgacagcgcgaaaag
cttgctggagaagttgacagcctcggcgaacgggaggaaactatgactgccaagatgaat
gagatgaatgatgagcgagagcgtatcaaaggccaactggaccatgcacaggccgaaagg
cgtcgaatcaatatgagggagactgaaatcaatgagcgtcttcaggatacctatcacaag
cttctccaagctggggctgataggcgtgaaaatgaaagggagactaggctaaaggagact
ctcgctagccttaaacgaatttttcccggcgtacatggtcgagttgttgacctgtgtagg
cccgtggcaacgaaatacgatactgctgtcatgaccgttctgggtaaaaatatcgacgca
gtagttgtcgaacatgagaaggttgctatcgactgcatcgagtacatgcggaatcaacga
gcaggacaagctactttcatccctcttgacaccatacaagttaaacctgtccctgagagg
cttcgcaacttcgctcgtggtgcccggcttgccattgattgcattgagtatgatcccgcc
gttgagcgggctatgcagcatgcttgtagtagctcattaatttgcgatactatggatatc
gcgagatatgtctgctatgaaagggctcaggaagtcaaagctgtaacattggatggcact
gtgatccacaaaagcggtttaatcacgggtggccagggagcaggaggaggtaggaaattt
gacgataaagaagtcgaaggtcttaataaattaaaggaaacctaccttgcccagcttcaa
gaactttatcgatcaaaacctcaagacaaaggcgacgaagctctcttggagagcctttct
cgacttgatgctgaatccaatatcgccaaggatgacctccatgctatacaagtccgtctt
cgtggcgttcgtgaggaactcacacatgccatctccacaattgaacgtctcacccccgac
gtcggggctcgctcccagtctgccgcgtcttcagaggagcgttcagctgctctagtggaa
attattgagcaggctgatgatgaggtattcagcgctttctgtcagaggattggtgtttct
aatatcagggagtacgaagacgtacaactcagaattgccaaggaggcgaatgaggccatg
gagagcttcgcagctcagcaggcgagggtaaaacatcagattgactttgagtcctctcag
ctcagaaacactcgcgagcgcattgcccaccttcgagacctcgctaccaaagcagagaac
agcgtcaccgaactacgttctcagcgcgaggaaatccagggggaactcgagtcccttcga
gccgaaattgatcgtcagcgaggtaaactcaacgatgctaatgacgtacgcgacgaagtg
gttcgccgggttgatgagatgcgtgaacgctctcgaaaagcgcaaaagactttggacagg
gcgatcaaagagattgcgacatggaacgacgagatctcgaagtatgcctctgatagacat
gcgatctatagaaggtgtagactagaagagattgatctgccgttgatcaaaggaagactt
gacaaagttccgatcgaagaacccaccaaagatgaggacgggataatggaggatgagaaa
gctactcagaaaccagtggaagtagatgattacggcttagaaccggactttgatatctta
gaagaggaggatagagcgaacgaagatgaagaagtcggtcgcgaattcgaagctcagatc
tccaaaatgagaaatgatctcgaacgtttggttccgaatatgaaagcggtggaacgactg
gacgaggttgagagggagctggacgatgcagaacgagaagcggaggagacgaggaaggag
agcaaacgagcaaaggacgatttccaggcgataaagaaaaagagatgcgatctgttcaac
aaggcatataatcacatgtctgaagtcattgataagatctacaaggatctgactaaaagc
cagaatcaagtaggaggtacagcctggtttacccttgaagaggccgaggaaccgtatctt
agtggtgtcaattatagcaccatgcctccgggtaaaagattcgcggaaatggaacaactt
tctggaggtgaaaagacgatggctgctcttgcccttttgttcgccatccacagctttcat
cctgcgcctttctttgtccttgacgaagttgatgcagctttagatgccacaaatgtacag
aaactgtcaagatacatacgaagccaggccgacaggaatgtacagtttttgattatttcc
ttgaagagcactttatacgaaaaagcggacggattggttggtgtatatcgagagcaagag
cagaatagctcaatgaccctaactctcgatctgaggaagtatggaaactag
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