Cryptococcus deuterogattii: CNBG_0465
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Entry
CNBG_0465 CDS
T09796
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNBG_0465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdeu03019
]
CNBG_0465
Messenger RNA biogenesis [BR:
cdeu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CNBG_0465
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
CNBG_0465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
88176702
NCBI-ProteinID:
XP_062880618
UniProt:
A0A095C1X2
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Position
4:complement(216868..218157)
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AA seq
331 aa
AA seq
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MFSIKAVAPSISQAFTENVPSTHRKHQAELDAMDLDEDEFGGPGPSKRSIVSPGEVITSS
KEYMRGHGTYVEESNVVSSVAGTIERVNKLISVRPLHSRYTPEVGDLVIGRIVEVGAQRW
RVDANGRQDAVLMLSSVNLPGGVQRRKIESDALKMREFLAEGDLLVAEVQAFFGDGAMSL
HTRSLKYGKLRNGFLLTVPPQLIRRLKSHFYHVPPPCGPTGVDVILGLNGYVWVSNGTSQ
GRREGGEGFDSEGVYSNQNDEISPEGREAVSLIANIIKVLAGEGIPLTETLIGESYAWAE
KNVTSGSGPFDSETEKKMLNEIVGLEFPEIA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcataaaagctgtagcaccgtccatcagtcaagcgttcaccgaaaacgtgccg
tcaacacatcgcaagcaccaagcggaacttgatgcaatggatctcgatgaagatgagttt
ggtggccctggacctagcaagaggtctattgttagtcctggagaggttattaccagctcc
aaagagtatatgagaggtcatggaacctatgtcgaggagagcaatgttgtgtcctctgtg
gctggtacgattgagagagtaaacaaactcatttccgtcaggccacttcattcaagatat
acgcccgaagttggagatctggttatcggtcgaatagtagaagtgggagcgcaacgatgg
cgtgtagatgcgaacggacgccaagatgctgttttgatgctttcaagtgtcaacttgccg
ggcggtgtacaaaggaggaagattgagtcggacgctttgaagatgagagagtttttggcg
gaaggagatttgcttgttgctgaagttcaggcattctttggtgatggtgctatgtcgtta
catacgcgatcattgaagtacggtaaacttcgtaacggctttctcttaaccgtccctcca
caattaatccgccgacttaaatcacatttttaccacgttccccctccctgtggtcctacg
ggtgtcgacgttatcctcggtttgaacggttacgtgtgggttagtaacggaacatcacag
gggcgacgggagggcggtgaagggttcgactcagaaggtgtatatagcaaccagaatgac
gaaatctctccggaaggcagagaggccgtttcactcattgctaacatcatcaaggttctt
gccggtgaaggtattcctcttaccgagactcttatcggcgaatcatacgcatgggcagag
aaaaatgtgacatctggatcaggaccatttgattcggagactgagaagaagatgctcaac
gagattgtcggtttggaatttcccgaaattgcttga
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