KEGG   Cryptococcus deuterogattii: CNBG_0465
Entry
CNBG_0465         CDS       T09796                                 
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
cdeu  Cryptococcus deuterogattii
Pathway
cdeu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cdeu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CNBG_0465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdeu03019]
    CNBG_0465
Messenger RNA biogenesis [BR:cdeu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     CNBG_0465
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     CNBG_0465
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 ECR1_N_2 RRP40_S1
Other DBs
NCBI-GeneID: 88176702
NCBI-ProteinID: XP_062880618
UniProt: A0A095C1X2
LinkDB
Position
4:complement(216868..218157)
AA seq 331 aa
MFSIKAVAPSISQAFTENVPSTHRKHQAELDAMDLDEDEFGGPGPSKRSIVSPGEVITSS
KEYMRGHGTYVEESNVVSSVAGTIERVNKLISVRPLHSRYTPEVGDLVIGRIVEVGAQRW
RVDANGRQDAVLMLSSVNLPGGVQRRKIESDALKMREFLAEGDLLVAEVQAFFGDGAMSL
HTRSLKYGKLRNGFLLTVPPQLIRRLKSHFYHVPPPCGPTGVDVILGLNGYVWVSNGTSQ
GRREGGEGFDSEGVYSNQNDEISPEGREAVSLIANIIKVLAGEGIPLTETLIGESYAWAE
KNVTSGSGPFDSETEKKMLNEIVGLEFPEIA
NT seq 996 nt   +upstreamnt  +downstreamnt
atgttcagcataaaagctgtagcaccgtccatcagtcaagcgttcaccgaaaacgtgccg
tcaacacatcgcaagcaccaagcggaacttgatgcaatggatctcgatgaagatgagttt
ggtggccctggacctagcaagaggtctattgttagtcctggagaggttattaccagctcc
aaagagtatatgagaggtcatggaacctatgtcgaggagagcaatgttgtgtcctctgtg
gctggtacgattgagagagtaaacaaactcatttccgtcaggccacttcattcaagatat
acgcccgaagttggagatctggttatcggtcgaatagtagaagtgggagcgcaacgatgg
cgtgtagatgcgaacggacgccaagatgctgttttgatgctttcaagtgtcaacttgccg
ggcggtgtacaaaggaggaagattgagtcggacgctttgaagatgagagagtttttggcg
gaaggagatttgcttgttgctgaagttcaggcattctttggtgatggtgctatgtcgtta
catacgcgatcattgaagtacggtaaacttcgtaacggctttctcttaaccgtccctcca
caattaatccgccgacttaaatcacatttttaccacgttccccctccctgtggtcctacg
ggtgtcgacgttatcctcggtttgaacggttacgtgtgggttagtaacggaacatcacag
gggcgacgggagggcggtgaagggttcgactcagaaggtgtatatagcaaccagaatgac
gaaatctctccggaaggcagagaggccgtttcactcattgctaacatcatcaaggttctt
gccggtgaaggtattcctcttaccgagactcttatcggcgaatcatacgcatgggcagag
aaaaatgtgacatctggatcaggaccatttgattcggagactgagaagaagatgctcaac
gagattgtcggtttggaatttcccgaaattgcttga

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