KEGG   Cryptococcus deuterogattii: CNBG_0473
Entry
CNBG_0473         CDS       T09796                                 
Name
(RefSeq) pre-mRNA-processing factor 6
  KO
K12855  pre-mRNA-processing factor 6
Organism
cdeu  Cryptococcus deuterogattii
Pathway
cdeu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cdeu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CNBG_0473
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cdeu03041]
    CNBG_0473
Spliceosome [BR:cdeu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    CNBG_0473
 Complex C
   U5 SnRNP specific factors
    CNBG_0473
SSDB
Motif
Pfam: TPR_14 PRP1_N HAT_PRP39_N TPR_19 TPR_16 Suf HAT_PRP39_C HAT_Syf1_CNRKL1_N TPR_6 TPR_21 ANAPC3 TPR_CcmH_CycH FAT ARM_TT21 TPR_12 Cdc6_lid
Other DBs
NCBI-GeneID: 88176710
NCBI-ProteinID: XP_062880626
LinkDB
Position
4:complement(196975..200230)
AA seq 942 aa
MSNVGTVKHIPKEVRYNFLNMAAPASYVAGLGRGASGFTTRSDIGPARAGPSAEVVAEAQ
ARRGEEEIPDPDAFQDPDDERNLFAGTVYEADDEEADRVWDSVDARMDARRKARRDAAEA
KAAAEERARNPKLQTQFADLKRSLSSLNDADWDAIPEAGNLTGKRRKANLRMEENQNGRS
YNVSDTVIADAVKRNAMVGELDPAEAGIGIDGTETDLVSIGNARDRVLSLQLDQATRDAS
NGSSTSIDPKGYMTALNSQIVQTDAQIGDIKQARQLLQNLIQSNPKHAPGWIAAASLEVH
AKKMVAARKIIAEGCEKCPKNEDVWFHAAELNTPENAKVILGRAIQHVPQSVKIWLKAAS
LETDINAKKRVLRKALEFVPNSVGLWKETVNLEDDPEDARVLLTRAVEVIPNSVELWLTL
ARLETPENAKQVLNSARKRIPTSHEIWIAAGRLAEQSPTAVAVKPEVKMEDEAEYEAEQR
KKLAQQVNKLMAGAVNSLRKNQVILSREQWLQEAEKCEQDGSPLTAQAIVKATIAQDVEE
EDRRSVWIEDAERATKGGFYEVARACYAVTLEAFPTTPSVWRKAAEFEKAHGTPDAVQEI
LAQGSQQCPHAEVLWLMAAKEKWVGGDIPGAQAILAEAFKANEDSESIFLAAAKLAAETG
EMEAAIQILEKAKAQADTERVWMKSAVLLRQLGKLDEALSTLEVAIKKFASFDKLHMIRG
QIYESRNEVALARNAYAQGCRSCPKSIPLWILSARLEEKAGVTIKARALLEKARLHNPKN
DELWAESIKIEERTGSTQQAKSVLARAMQECPASPLLWSMAIFMEAPQQRKGRSVDAIKK
AGEHPAVILAVARNFWSERKIEKTRQWMANAITADEDWGDAWGYWLKFERQHGEKERQEA
VIEKCIAASPHHGPVWQSVSKDLANVGKSTREILELVADKIE
NT seq 2829 nt   +upstreamnt  +downstreamnt
atgtccaacgtcggtacagtgaagcatattcccaaggaagtgcgatacaacttcctcaac
atggccgctccggcgagctatgttgctggtctcggtcgaggtgcttctggtttcacaact
cgatccgatattggtcccgcccgagctggccctagtgcagaggttgttgcggaagctcaa
gctcgccgtggtgaagaagaaatccctgatccagatgcttttcaagatccagatgacgaa
aggaacttgtttgcgggtacagtttatgaagcggatgatgaagaggccgacagggtgtgg
gacagcgtcgatgccagaatggatgcgagaaggaaggccagacgggacgctgcagaagcg
aaagctgcggctgaagagcgcgctcgcaatcctaaacttcaaacacaatttgcagactta
aagcgatctctctcgagccttaacgatgctgactgggacgccatccctgaagcaggaaac
ttgactgggaaaaggagaaaagccaacttgcgaatggaagaaaatcaaaatggaagaagc
tacaatgtcagcgacactgttattgcagatgccgtgaagagaaatgctatggtaggagag
ttggatccggcggaagccggtattggtatcgatggcaccgaaacagatcttgtttctatc
ggtaatgccagagacagagtactgtcactgcagcttgaccaagccacacgagatgcctca
aacggctcttctaccagcatcgaccctaagggctatatgaccgctcttaacagccaaatt
gttcaaacagatgctcaaatcggtgacatcaagcaggctcgccaactcttgcaaaacctc
attcagtccaatccgaaacacgccccaggatggatcgccgctgcctctttggaagtacac
gccaaaaagatggtcgctgccagaaagattatcgctgaaggatgtgagaagtgtccgaag
aacgaggatgtttggttccatgccgctgaactcaacacaccggagaatgcgaaagtcatc
ttgggtcgagctatacagcacgttcctcaatctgtcaaaatctggctcaaggctgcctct
ctagaaacagacatcaacgccaagaagcgtgttctccgaaaagctcttgaattcgttccc
aactctgttggattgtggaaagagactgtcaatctcgaagatgatcccgaagacgcccgt
gtcctccttactcgtgctgtcgaagtcattcccaactctgtggagctgtggctcacttta
gcgcgtcttgaaactcctgaaaacgccaagcaggttctcaattctgcacgcaagcgtatt
cctacctcccacgaaatctggattgctgccggtaggcttgctgaacagtcacctaccgcc
gtggctgtcaagccagaggtcaagatggaggatgaggcggagtacgaggctgagcagaga
aagaagcttgctcagcaggtcaacaagctcatggctggtgctgtcaactcattacgcaaa
aaccaggtcatcctttcgcgagaacagtggttgcaagaggctgagaaatgtgaacaagac
ggctcacctcttacagcacaggctattgtgaaggctaccatcgcccaggacgtcgaagaa
gaggacaggcggtctgtctggattgaagatgcggagagggcaacgaaaggcggattctac
gaggtcgcgagggcttgttacgctgtcactcttgaggctttccctactaccccgtcagtc
tggagaaaagccgctgagttcgaaaaggcccacggcacacccgatgctgtccaagaaatt
ctggcccagggctcccaacaatgtccccatgcggaggtcctctggcttatggccgcgaaa
gagaaatgggtcggcggtgatatccccggggctcaggccatccttgccgaagctttcaag
gcaaacgaggattccgaatctatcttccttgctgccgccaaactcgcagctgagaccggt
gagatggaagctgctatccaaattctcgagaaggccaaggcacaggcggacacagagagg
gtctggatgaagtcggcagtactattgaggcaattgggcaagttggacgaagccctttcg
acgttggaggttgctatcaagaaattcgcttcttttgacaagttgcacatgatccgaggg
cagatctacgagtcccgtaatgaagttgcgctcgcccgaaatgcctatgctcaaggatgc
cgatcatgtccgaaaagtatcccattatggatcttgtcagctcgcctggaagagaaggcc
ggtgtgacaattaaagcgagggcgttgctcgaaaaggcgaggttgcataatcccaagaat
gatgaattatgggcggaaagtatcaagattgaagaacgaacgggcagcacacagcaggcg
aaatctgtccttgctcgagcgatgcaagagtgtcccgcctctcctcttctttggtccatg
gcaatcttcatggaggctcctcaacaacgaaaaggtcgttctgttgacgccatcaaaaag
gccggcgagcatccagccgttatcttagcggtcgcgaggaacttttggagtgaaaggaag
attgaaaagacaagacaatggatggctaacgctatcacggccgatgaagattggggagat
gcctggggatattggctgaagtttgagaggcagcatggagagaaagaacgccaagaagcg
gtcattgaaaagtgcatcgcggcctcaccgcaccatggcccggtgtggcagtcggtatca
aaggatttggccaacgttggcaagtctacaagagagatactggagttagtcgcagacaaa
atagaataa

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