Cryptococcus deuterogattii: CNBG_0614
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Entry
CNBG_0614 CDS
T09796
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNBG_0614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdeu03019
]
CNBG_0614
Messenger RNA biogenesis [BR:
cdeu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CNBG_0614
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
CNBG_0614
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
88176847
NCBI-ProteinID:
XP_062880763
UniProt:
A0A095CZT5
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Position
2:complement(865190..866013)
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AA seq
191 aa
AA seq
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MSLPSLLLPGQPLPAQLIAPPLPKCGKGCYEHNGQILASVVGRPRRDGAVVSVIGREETV
GTVDVDSIVIGVISRLTPQQAHMTLTTLSDRPLPESSEDFTGLIRIADIRLTERDKVKMG
ECFRLGDIVKAKVLSLGDARSYYLSTAANELGVVYAKSEAGNPLLPVSYQEMEDEVTGKK
EKRKVAKPEGI
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaccatcattacttctgcccggtcaacctttgccggctcaacttatcgccccg
cccttaccgaaatgtggaaaaggttgttatgagcacaatggccaaatcttggctagtgtt
gtgggaagaccgcggagagacggtgctgtggtcagcgttattgggagggaagagaccgtc
ggtacagttgatgttgactccatcgtgatcggtgttatttccagattgacacctcaacaa
gcacacatgactcttacaactcttagtgatcgccctcttcccgaatcttcagaagatttc
acgggcctaattcggatcgcggacatcaggttaacagaaagagacaaggtgaagatgggt
gaatgttttagattaggtgatattgttaaggccaaggtgctaagtttgggtgatgcaagg
agctactatttgtcaaccgcagccaacgagctgggcgtcgtatatgcgaaatcagaagct
ggtaatccgttattgccggtcagctatcaggaaatggaagatgaagtgacggggaaaaag
gagaagagaaaagttgcaaagcctgaaggaatataa
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