Cryptococcus deuterogattii: CNBG_0714
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Entry
CNBG_0714 CDS
T09796
Name
(RefSeq) U3 small nucleolar RNA-associated protein 22
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CNBG_0714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cdeu03009
]
CNBG_0714
Ribosome biogenesis [BR:
cdeu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CNBG_0714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D5
Nrap_D3
Nrap_D6
Nrap
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
88176938
NCBI-ProteinID:
XP_062880854
LinkDB
All DBs
Position
2:1137889..1142045
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AA seq
1003 aa
AA seq
DB search
MPPGIFTPKDRLDYRYFHKRAFYLAVIFSELQRLASKEGELKGVRIEWDTNMADERRPII
VVHAGKDQGLKYKVDIRIHASIPSSLFPLSSLSPAKCLVRSSLLTTTDQLGAIPSPLYNT
SILHDTLQKPHLLHLHRLSQLLPSNTRTVDSFFALWRIWAKRRGIRRERGGSAWIAGMIL
GWVINGGWVGGVGGNREKVKKVVGVGRGLGAWAALRAAWEFLAHTDFEQTPIFLHPSSSP
SSFEHSVFLTFSHVFTDPTGLVNIFADWDAGEIDFLRYHARETLAMLEDESGERFADVFL
KGFDLGPAVFDEFFHVDISSARLPDDLFGRSEYPSVSSLAITHFSSTLRRGLSNRINFVH
ICPISEQSVSVGLLLDPSHANRVLDIGPSSDKPLEGEAFRGLWGEKAELRRFKDGSIAES
VVWDLSRPEDAALIPSKIVKYILEKHYSIPGDAVTSFSSSQNWLGLIQIPSTARDAISIK
GSEKLGFRPMLNDYDSLYKALKDIDQKLPLAVLNVQPSSPLLRYSSTFVPHPVDIHRFSA
APNCIKYIPSADVIVQFESSPKWPDDLAAVQKVKLALFDKLARTLPSKLPETKANIVFDA
GASEIEDQASLLVMLPKGISFRLRIYYEREKTMLERVLHEDKPLFATSLPYPPRRLVAPA
LAIHLERFHYLPAHHSSLAPMHHRYPTYSSACRLLKRWFAAHMLLGRGGVREEIVELIMA
GVYLEPGRGKTPSSAVGGFMRAMDLLECWDWRTEPLLIPIVSASSPSSTSASGRVRFPAE
LKEEALKLFEHLRANEKGTDGKEASVHAWVVCTEQDVEGMRWTKGIGKAVAARVRALARA
TVNAVKDSVERGSLDVQALFITPLEHYDIIIHLSSKFLSTSAQSILPNPSLWEPHLKYRN
LTSSSEDDDGMRIDFDPAALFVNDLKKLYGDSLMLFVDCHGGNVVGGVWNHTKNGARGLK
SFLGWNGMPVKSEAELVEVNKEAIIGEIARLGQDLVVKIERRR
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctggtatctttacgcctaaagataggcttgactacagatatttccataagcga
gcgttctacctagctgtcattttctcagaactgcaacgactggctagtaaagagggtgaa
ctgaaaggcgttagaattgagtgggatacaaacatggccgatgagagacgacctatcatt
gtcgtacatgctggcaaggatcaaggcctcaaatacaaagtggacattcgtatccacgcc
tcgatcccttcatcccttttccctttgtcatctttatcaccagcgaagtgccttgttcgc
agtagcttacttaccactaccgaccagcttggtgctatcccatcccctctatacaataca
tctatattgcatgacaccctccagaaacctcatcttcttcacttgcaccgactttctcaa
ctccttccatcgaatactcgcaccgttgactcctttttcgcgctatggagaatctgggca
aaacgaaggggaatacgaagagaaaggggtggtagtgcatggatagctggaatgatattg
ggctgggttatcaacggaggctgggtgggcggtgtaggcggaaatagagagaaagtgaaa
aaagttgtaggcgtcggtaggggtttgggagcttgggccgcccttcgggctgcctgggag
tttttggctcacaccgacttcgaacaaactcctatttttctccacccatcgtcctcgcct
tcgtcttttgagcattccgtgtttctcaccttctctcacgtttttacggaccctactggc
ctcgtcaatatatttgctgactgggacgctggtgaaattgatttcttacgataccacgca
agggagacattggcgatgttggaagatgaaagcggagaacggtttgccgatgtcttcctg
aagggattcgatcttggtcctgccgtgtttgatgagttcttccacgttgatatctcatca
gctaggctcccggatgatctatttggacgctccgaatacccttctgtctcctctctcgca
ataacccacttctcttctactctccgccgaggtctctccaaccgcataaattttgttcat
atctgcccaatttcagaacaaagcgtgtctgtgggattacttttggacccttcccatgct
aatcgcgttctcgacattgggccatcttctgacaagccattggaaggcgaagctttccgt
ggactctggggggagaaagctgagctgcgaagattcaaagatgggagcattgcagaaagt
gtggtttgggatctgtcgagacccgaagatgcggctttgatcccaagcaaaattgtcaaa
tatattctggaaaaacattactccatccccggagacgcggtcacctccttctccagctcg
caaaactggttaggtctcattcaaatcccgtcaaccgctagggatgcgatcagtatcaag
ggttctgagaagcttggcttccgaccgatgttgaatgactacgatagcctttacaaagcc
ttgaaagatattgaccaaaaacttcccctggcggttctcaatgtccagccttcttctcct
cttcttcgctattcttccacatttgtacctcatcccgtcgacattcatcgcttttccgca
gcaccgaattgcatcaagtatattccttctgccgacgtgatcgtacaatttgagagttca
ccaaaatggcccgacgatcttgcggccgttcaaaaggtcaagcttgctttgttcgacaag
ctggcaagaactctaccgtcaaagcttccggagacaaaagccaatattgtctttgacgct
ggggcgagcgagattgaggaccaagcatctttgctggtaatgcttccaaagggtatttcc
ttcaggcttcggatctactatgaacgggagaaaaccatgctggaacgggtgctccatgaa
gataaaccacttttcgctacctcgcttccctatccccctcgtcgacttgtggcacctgcc
cttgctattcatctcgaaagatttcactacctacctgctcatcattcttcccttgcaccg
atgcaccacagatatcccacgtattcctccgcttgtcgtcttttgaagaggtggtttgct
gcccatatgcttctgggtagaggtggggtgagggaggagatagtcgaactgatcatggcg
ggcgtgtacctcgaaccaggaaggggaaagacaccttccagtgctgtaggaggattcatg
agagcaatggatttgctggaatgttgggactggaggactgagcctttgctcattcccatt
gtcagcgcttcatctccatcttccacatccgcgtctggacgcgtgaggtttcccgccgaa
ctcaaagaggaggcacttaaattatttgagcatctccgtgccaacgaaaaaggcaccgac
gggaaagaagcgagtgtccatgcgtgggtcgtgtgcacagagcaggatgtggaagggatg
aggtggacgaagggaattggcaaggctgtggcggcacgtgtgagagcattggcaagagct
actgtgaacgccgtcaaagacagtgtcgaaaggggtagtctagatgtccaggcgctgttc
atcactcccttggagcattacgacatcatcattcacctatcttccaaatttctgtcgaca
tctgctcaatctatcctgcctaacccctcgttatgggaacctcacctcaagtatcgcaac
ctcacttcatcttcagaagacgacgatggtatgaggatcgactttgatccagccgccttg
tttgtcaacgatctgaaaaagctttacggtgacagcctcatgctttttgttgattgtcac
gggggcaatgtggtgggcggtgtttggaatcatacaaaaaatggtgcaagggggttgaaa
tcatttttaggttggaatggtatgcctgtaaagtccgaagccgagctggtggaggttaat
aaagaagcgattatcggggagattgcaagacttgggcaagacctggtggtgaagattgag
agaaggcgataa
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