Cryptococcus deuterogattii: CNBG_0978
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Entry
CNBG_0978 CDS
T09796
Name
(RefSeq) histone deacetylase complex subunit
KO
K14324
histone deacetylase complex subunit SAP18
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03013
Nucleocytoplasmic transport
cdeu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNBG_0978
03015 mRNA surveillance pathway
CNBG_0978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdeu03019
]
CNBG_0978
03036 Chromosome and associated proteins [BR:
cdeu03036
]
CNBG_0978
Messenger RNA biogenesis [BR:
cdeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CNBG_0978
Chromosome and associated proteins [BR:
cdeu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
CNBG_0978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
88177186
NCBI-ProteinID:
XP_062881102
UniProt:
A0A095C2L5
LinkDB
All DBs
Position
2:<1866558..>1867601
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AA seq
309 aa
AA seq
DB search
MPRSPSPSRGRSRSLSTRSRSRSPYSNRSPSPSPKGPRTPHLIRVFVTKGRHTPLADFDA
GVFPTRDEFQVYAWQTSTPSELIKLLYPSFPAPYRSPQTRFHFRHVYVDANPRGLYRFKD
LTSFIGRDLQSSNNDDSMDLDEDRELGKKGRKIEEKPLDDYGFVTGDFLSVSITIPEPRH
PVGSLAAGALAGIAGNSSAGPAGLREREGPRGGFGWGDRGGDRERPQRSIAPTSAPGEGP
DATRWGRGAPLPPQGRIGSRGGRGGYERAPLPEGRWNRNDDRNGPTGPARDRSRSPRRNR
RESWGKRRD
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgatctccatcaccgtccaggggtaggagcagatccctatccactcgatctcgt
tctcgctccccttactcaaacaggagtccctccccctcaccgaagggaccgcggacaccg
catttgatcagggtttttgttaccaaaggaagacacactcctctggctgactttgatgcc
ggtgtcttcccaacaagagatgagttccaggtttacgcttggcaaacatcaaccccaagc
gaacttataaagctcctttacccatcattccccgctccttaccgatctcctcaaactcga
ttccatttccgacacgtttatgtcgatgccaatccgcgcggcctctatcgtttcaaagac
ctcacatctttcattggtcgcgatctgcaaagcagcaataacgacgactctatggacctg
gatgaggatagggagctcggcaagaaaggaagaaagattgaagagaaaccattggacgac
tatggtttcgttactggagactttctgagcgtcagcattactattccagaaccccgacat
cctgtcggctcactcgctgctggtgcccttgctggtattgctggtaattcttccgccggc
ccggccggattgcgcgagcgtgagggtccaagaggagggtttggctggggtgaccgggga
ggtgatcgagaacgaccgcagcgctcaatcgcgccaacttctgccccgggagaggggcca
gatgctacccgatggggtcggggtgcccctttgccgccacaaggtaggatcggctccaga
gggggaagaggagggtacgagagggcgccgttgcctgaaggaaggtggaaccgtaatgat
gataggaatgggcccactgggccggcaagggatagaagtaggagcccacggaggaatcga
agggagagctggggcaaaagaagggattag
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