KEGG   Cryptococcus deuterogattii: CNBG_1090
Entry
CNBG_1090         CDS       T09796                                 
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
cdeu  Cryptococcus deuterogattii
Pathway
cdeu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cdeu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CNBG_1090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdeu03019]
    CNBG_1090
Messenger RNA biogenesis [BR:cdeu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     CNBG_1090
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 88177407
NCBI-ProteinID: XP_062881208
LinkDB
Position
3:complement(34398..36029)
AA seq 374 aa
MGKLEILVCPPTLDIYVDIYIRQLLPFLDLWYHPLSSCCYTSAPDYLEVDSEKMSTTTAA
VPKATATAGTTGVGGANAAAVFKRLHPASYLSRFLSSGYRPDGRPILSSSSSQPTTSASA
SAADDIWRQVSINMGSISTAHGSALVRMGDTTMVCGVKAEIGEPDTETPGEGFVVPNIDL
PALSSPKFKPGPPGDEAQTYSNWLNELLVSSKTIPLSSLLIAPGKAAWVLYIDVVCINYD
GNAFDAAVLAVMAALKNTRLPKAVYDDDTQRTICSRTERYPLKLGRMPLSCSFGIFGSTH
LLPDPTSFETPLLPTTLTIALDQDGQAALVRQEGLGGLRKEGGGKNGKEVVDEAWELSAT
RVEVLRKALDEAEA
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgggaaagctagaaatacttgtctgtccgcccaccttggacatttacgttgacatttac
attcgccaacttttgccttttctcgatctctggtaccacccactttcttcttgctgctac
accagtgcaccggactacttggaggttgacagcgagaaaatgtctacaacaacagcagca
gtaccaaaagcaacagcaacagcgggaacaactggtgtaggaggtgcaaacgcagcggca
gtcttcaaacgtcttcatcctgcttcttatctctctaggtttttgagttcgggatacagg
cctgatgggagacctatcctttcttcctcctcttcccagcccaccacctctgcctctgcc
tctgccgcggacgacatatggagacaagttagtatcaacatgggctctatatccaccgct
cacggttcggcgcttgtgaggatgggggatacgacgatggtttgcggtgtaaaagctgag
attggggagcccgatacggaaacgcctggggaggggtttgtagtacccaatattgacctc
ccagcactgagttcaccaaaattcaaacccggtcctcctggcgatgaggcgcaaacgtac
tcaaattggttaaacgagttgctcgtttcatcaaagacaatccctctgtcatcattactt
atcgcgccaggtaaagccgcttgggtactctatatcgatgtggtgtgcataaactatgat
gggaatgcgtttgatgcggctgttttggctgtgatggccgctcttaagaatacgaggtta
ccgaaagcggtatacgacgatgacactcaacggacgatttgttcgaggacggagaggtac
ccgctgaagttggggaggatgcctctgtcgtgttcgtttggaatttttggaagcactcac
ctcctcccagacccaacgtcgttcgaaaccccactgttacccaccaccctcaccatcgct
ttggaccaagatggacaagcggcgctcgttcgacaagaaggtcttggtggtttgagaaaa
gaaggaggagggaaaaatgggaaagaggtggtggatgaagcgtgggagttgagtgcgact
cgggtagaagttttgagaaaggcgttggatgaagctgaggcgtaa

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