Cryptococcus deuterogattii: CNBG_1146
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Entry
CNBG_1146 CDS
T09796
Name
(RefSeq) ATP-dependent RNA helicase eIF4A
KO
K03257
translation initiation factor 4A
Organism
cdeu
Cryptococcus deuterogattii
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdeu03019
]
CNBG_1146
03012 Translation factors [BR:
cdeu03012
]
CNBG_1146
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cdeu04147
]
CNBG_1146
Messenger RNA biogenesis [BR:
cdeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CNBG_1146
mRNA cycle factors
Stress granule specific factors
CNBG_1146
Translation factors [BR:
cdeu03012
]
Eukaryotic type
Initiation factors
eIF-4
CNBG_1146
Exosome [BR:
cdeu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CNBG_1146
Exosomal proteins of bladder cancer cells
CNBG_1146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
UvrD-helicase
Flavi_DEAD
tRNA-synt_1b
AAA_22
fragilysinNterm
Motif
Other DBs
NCBI-GeneID:
88177467
NCBI-ProteinID:
XP_062881262
UniProt:
A0A095ECV2
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Position
3:complement(204261..205979)
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AA seq
401 aa
AA seq
DB search
MSDTKGAAEQGLQMDGDLINSNWNEVVDNFDDMKLKGELLRGIYAYGFERPSAIQQRAIM
PIVTGRDCIAQAQSGTGKTATFSVSILQRIDTTVKKTQALVLAPTRELAQQIQKVVIALG
DYLNVDCHACVGGTAVREDIARLNEGPHIVVGTPGRVFDMINRGALKTEAVMMFCLDEAD
EMLSTGFKESIYEIFQLLPGETQVVLLSATMAPEVLDVTKKFMRDPIRILVKKDELTLEG
IRQFYINVEKEEWKLETLCDLYETVTITQAVIFCSTRRKVDWLTQQLHDRQFTVSAMHGD
MKQEEREVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSSKENYIHRIGRGGR
FGRKGVAINFVSNEDKNMLEEIETYYNTQVEEMPLNVADLI
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacactaagggtgcggccgagcaaggccttcaaatggatggtgacctcatcaac
tccaactggaatgaggttgttgacaacttcgatgacatgaagttgaagggcgagcttctc
cgtggtatctacgcttacggtttcgagcgaccttctgctattcagcagcgtgctatcatg
cccatcgttactggacgtgactgcattgcccaggctcagtccggtaccggtaagaccgct
accttctccgtctctattctccagagaatcgacaccactgttaagaagactcaggctctt
gttcttgctcccacccgagagcttgctcagcagattcagaaggtcgttatcgctctcggt
gactacctcaacgtcgactgccacgcttgtgtcggtggtaccgccgtccgagaggacatc
gccaggcttaacgagggtcctcacatcgttgtcggtacccccggtcgtgtctttgacatg
atcaaccgaggtgctcttaagaccgaggccgtcatgatgttctgccttgacgaggccgat
gagatgctttccaccggtttcaaggagtctatctacgagatcttccaactcctccccgga
gagacccaggtcgtcctcctttccgccaccatggcccctgaggtccttgacgtcactaag
aagttcatgagggaccccatcaggattctcgttaagaaggatgagcttacccttgaaggt
atccgacagttctacattaacgtcgagaaggaggagtggaagctcgagactctttgcgac
ttatacgagaccgtcaccatcacccaggccgtcatcttctgctctacccgacgaaaggtt
gactggcttactcagcagctccacgaccgtcagttcaccgtgtctgccatgcacggtgac
atgaagcaggaggagcgagaggtcatcatgaaagagttccgatccggttcttcccgagtt
cttatcaccaccgaccttttggcccgtggtatcgatgtccagcaggtttctttggtcatc
aactacgacctcccctcttctaaggagaactacatccaccgaattggtcgaggtggtcga
ttcggccgaaagggtgttgctattaacttcgtttctaacgaggacaagaacatgcttgag
gagattgagacttactacaacacccaagttgaggaaatgcctcttaacgttgccgacctc
atctaa
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