Cryptococcus deuterogattii: CNBG_1161
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Entry
CNBG_1161 CDS
T09796
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CNBG_1161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdeu03400
]
CNBG_1161
DNA repair and recombination proteins [BR:
cdeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CNBG_1161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Motif
Other DBs
NCBI-GeneID:
88177480
NCBI-ProteinID:
XP_062881275
LinkDB
All DBs
Position
3:244302..248194
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AA seq
964 aa
AA seq
DB search
MPMYGNESTSAPKPLFDMDKDSEEKFVRFVERMPTKLDGMIRLFDRGDYYSAHGADAIFI
ANEVYRTTNVLKYLGSGKPSSSSGSYARGLPSVTISMALTKAFLREALTTKQMRIEIYAP
TGGVAPGSRKDHSKWEISKTASPGNLSQVEDLLFSDKDLTANAVSMAIRVVVKDGVNTVG
VGFVDVQEKVVGVSEFVDDENFSNTESLLIQLGVKECILQADEKRPELAKLRMLVEWCGV
IVTDRKSSEFQTKNVEQDLNRLLDESHAGAALPEFDLKIAMSALSALINYLSLLSDLSLH
GQLRLHRHDLSQYMKLDASALKALNLMPNPQELGGNRNMSIYGLLNRCKTSQGTRLLGRW
LKQPLVNRHEIIQRQTMVEVFVEDSVNRQSIQTKYLKQMPDFHRISKKFHKRVAGLEDVV
RVYQAVQLLPGLQEILENANTPEPGARDLIEEIWLKPLREHIERLGNYSSMVEDTIDLDE
LANHNYVILPTIDEDLQRHRDELLDVRDQLDDEHRRVGNDLGLDIDKKLHLENHQVYKYS
FRITKAEASLIRNKKEYIDLATQKSGTIFTTKTLKALSEEYFRLQELYEKQQRHLVKEVV
SIAASYTPVLEMLDNLIAAVDVIVSMAHVSSEAPIPYVKPILTEKGTGDVVVLGARHPCL
EVQDDIVFIPNDHEMRKGDSEFIILTGPNMGGKSTYIRQIGVIALMAQVGCFVPATEAQL
PIFDCILARVGAGDNQLKGVSTFMAEMLETATILRSATKDSLIIIDELGRGTSTYDGFGL
AWAISEYIAEKIHCFCLFATHFHELTTLSEQNPHVKNLHVEALVKDKDGEGGGKERDITL
LYQVKEGICDQSFGIHVAELANFPESVVKLAKRKAEELEDFGDNQTPALSSKFSKTEIDA
GTDIVKEFLDTWKSRVSAAGSGEGADAEMAMSEDEMVQLLKNTAEEFKDRLEGNEWVKSL
MSTF
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcctatgtatgggaacgaatccacctcggcgcccaagccgctcttcgatatggacaag
gacagcgaagaaaaatttgtgcgatttgtggagcgtatgccgactaaattggacggcatg
atcaggctgttcgaccgtggggattattactcggctcacggcgcggacgccatcttcatt
gccaacgaagtctataggactacaaacgtcctcaaataccttggctcaggaaagccctct
tcctcttccggatcatatgctcgaggattaccttctgtcaccatctccatggctttgacc
aaggcgttccttcgcgaggcccttacaaccaagcagatgcgtatcgaaatttacgcccca
accgggggagtcgcgcctggcagccggaaggaccattccaaatgggaaatctcaaagaca
gcttcccctggtaatctgagtcaagtcgaagatttgctattcagtgacaaagatctgaca
gcgaatgcggtttcgatggccatcagggtggtggttaaggatggagtgaacactgtcggt
gtgggtttcgtagatgtacaggaaaaagtggtcggagtatctgaattcgttgacgatgaa
aacttttcaaataccgagtcgctattgattcaacttggtgtaaaggagtgcatattgcaa
gcagatgagaaacgccctgagctggccaaattaaggatgttggtggagtggtgtggggtc
atcgtcactgatcgcaaatccagcgagttccaaaccaaaaatgttgaacaggaccttaac
cgtttgttggacgagtcccatgctggtgccgctttgcccgaatttgacctcaaaattgcc
atgtccgccctatcagcccttatcaattatctctcacttctctccgatctctctctccac
ggtcaactcaggttacatcgtcatgatctctctcaatacatgaagcttgacgcatccgct
ctcaaggctttgaacttgatgccaaatcctcaagagcttggtggtaacagaaatatgagc
atatatggattgttaaacaggtgcaaaactagtcaaggaacaaggttattgggaaggtgg
ctgaaacagcccttggtgaatcgccatgagatcattcaaagacagactatggttgaagtc
ttcgtggaggattctgtcaatcgccaatctattcaaacaaagtatctcaaacagatgccc
gacttccacagaatctcaaaaaagttccacaaacgagtggccggattggaagacgtcgtc
agagtgtatcaagctgtgcaactgctgcctggtctacaggaaatccttgaaaatgccaac
accccagaaccaggggccagagatcttattgaggagatttggctcaagcctttacgtgaa
catattgaaaggcttggaaattactcttccatggttgaagataccatcgatctcgacgaa
cttgccaatcacaactatgtgatactccctactatcgatgaagacctccagagacacaga
gacgagttgttggacgtgcgagaccagcttgatgatgaacacaggcgagttggaaatgat
ttaggtctggatatcgacaagaagcttcatttggagaatcatcaagtttacaagtactct
ttcaggattacaaaggcggaggctagcctcattcgtaacaagaaggaatatattgacctc
gctactcaaaaatctggtaccatattcaccactaaaaccctcaaggcgttaagcgaggag
tacttcagattgcaagaattgtacgagaagcagcaaaggcaccttgtcaaggaggttgtc
tcgatcgctgcctcgtacacaccggttttggaaatgctggataacttgattgcggctgtc
gatgtcattgtcagtatggcccatgtctcttctgaggctcccattccttatgtcaagccc
atcttgactgaaaaaggtaccggcgacgttgttgttctaggcgcccgtcacccttgtctt
gaagtccaagacgacattgtttttatccctaatgaccatgagatgcgcaagggtgattcc
gagtttatcattcttaccggaccgaacatgggtggtaaatcaacgtacattcgacaaatt
ggcgttatcgcccttatggctcaggtcgggtgctttgtgccggctacagaagctcagtta
cccatctttgactgtatccttgccagagttggtgctggggacaaccaactgaagggagtc
agtacgttcatggccgaaatgctggaaaccgcgaccatcttgaggtctgcaaccaaagac
tctttgatcatcatcgatgagcttggtagaggtacatctacatacgatggttttggtctt
gcatgggcgatatcagaatacattgccgagaagatccactgcttctgtctcttcgccact
cactttcacgagcttaccaccctttctgaacagaaccctcacgtgaagaacttgcatgtg
gaagctctcgtcaaagacaaagatggagaagggggtgggaaggaaagggacatcacattg
ctgtaccaagttaaagaaggtatctgtgatcaaagtttcggtatccatgtggctgaactg
gcaaactttcctgagagtgtcgtcaagctcgccaagcgtaaagcggaagagctggaagac
tttggagacaaccaaaccccagccttgtcatccaagttctcaaagaccgaaatcgatgct
ggtacggacatcgtcaaagagttcctcgacacctggaaatctcgcgtctctgccgctgga
agtggagaaggggcggacgctgagatggccatgagtgaagatgagatggttcagttgttg
aagaataccgctgaagaattcaaggaccgactggaagggaacgaatgggtgaagagcttg
atgagcacattctag
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