Cryptococcus deuterogattii: CNBG_1192
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Entry
CNBG_1192 CDS
T09796
Name
(RefSeq) uncharacterized protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03082
ATP-dependent chromatin remodeling
cdeu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CNBG_1192
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CNBG_1192
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cdeu01009
]
CNBG_1192
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdeu03021
]
CNBG_1192
03036 Chromosome and associated proteins [BR:
cdeu03036
]
CNBG_1192
Protein phosphatases and associated proteins [BR:
cdeu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CNBG_1192
Transcription machinery [BR:
cdeu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CNBG_1192
SWI/SNF complex
CNBG_1192
Chromosome and associated proteins [BR:
cdeu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CNBG_1192
PBAF complex
CNBG_1192
SWI/SNF complex
CNBG_1192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
88177510
NCBI-ProteinID:
XP_062881305
LinkDB
All DBs
Position
3:331474..336964
Genome browser
AA seq
1746 aa
AA seq
DB search
MNYQQQFLNMDSNNGQGDPGPSSMAQQNQPRFRPPFPGQPGMNPQQLAMLQQMSQAAQAQ
AGQPSQGQGRPSLTSQQIQMAMASMQAQAQAQGFNMANMNPQALIQAMRNQQLNQNQQQG
MQAGSQVGQGQGGQAQLGQQNQQQGQQPQAQNLAGSYQPGQPHPNPAQLAFQQQRIAQLM
QAQGMQARPGGPGSPIRPPQQFPQQQQPQQRAGSMPPPPVPGQQPQQQQLQNSPFPPQQP
NPQPTPQPMQLSLSPAQQQMLTQQRQTLLSNPQFQSMPPQQQHIILQQQQNQYLRMIAMQ
QAANQQQGGQHPLQGQTQPSSQQPQQHSSQGRPGSSQGVSQSPVIHRQPTPQLGGTSQQS
PLSSLPQHMAQPRPGSAASQRPVTPQTGPIGPGSPAIRTPPAGGMFQQPPQHMSHSGNAP
SPTLSTHSHHSQQHHTPQQGPTMVSPVLPRMDGGGTPQSGQGQGSGMNGEPKGFPLQQGQ
PGHQGSVQDPNNIGTPYRSFRIPGQLDARAFPTLPTNYTPEQQQQVASALTLMSRAVQGQ
GQGQGQNQNQGPEGQQQGQGQLPQPSQMQPAVRPGPGSVQAPAVPGPNSNMPRPPPIPLD
IDTSDFPFDPRILQYLPYIGDAQWRTQVQAQNPGLFAAVQHAAGMWQTIRPEVMQRMQSA
FVAMKNAALRGTQQGAPIQSGQPGQQGQQPSLGQQQELVQAQQQQQQQQLQQQQKLQQQQ
QQQQQQQQQQQQQQPAQTPAAQLGPAQLAQQAWTQQQAAQAQAQMGAHAQAQAQAQAQAQ
AQAQAQARMQAQESPVPGSNISPPIRLPATPHVAPAPSSPVGRRPSSSSMKDIKRDRTPS
GSGPVGQTSMPPPNFIPSHNGKPPSALGGSLEQVVTATPPSAGAGATSIPTAASTSTPTA
PTHIPTPMPATAAAPTRQSLSGPSLPIKEWATALHLDIPVTKISPLPVNTIDEAIDPTFD
GQLPPLSEKEKVNIKKWLDNDVAFVAKKKERQPRVLGKMKRWAEEDDRGTEWWMLRKGEK
RVMPQTKLRVLWPSDKERMRAQRTHKGRRQVKFSQSDLKKMAEVEDHIVPVRLELEHEGQ
KLKDTFMWNCSDTVVTPELFAHILCDDFAVPHQHFASRIVAAIEERVREYKDQVLPLLES
RSKGDCQGKLDPDGDDEARAMCEVFRKAREGSGIDDEIKTDPGEEDGADHIRIVTFDDQV
NGVDLDDERPWTVEEAMTLVPKELPQDLRILIKVDIIIGTQNLTDSFEWDLHSSVTPEEF
AASYVTELGLSMEFATAIAHDIREQILIYQRSLFLVGHTDSSSVILDDEVRGAFLPPVTT
TLRKEDIAMASYTPIFSELGPDQLALLESQREKEMKRKKRAGRARRGIVLPEREPVKTQR
TLLNNLGPNGVPILFQTDNVPVRDSAPTSRRRGAALAAEANINLLAQDLPIPASGSPAPH
LPHMSARGKRLGRPPKNRAISPVSIREEPLANGGTPITGDIKGRRGYLDESVDEQSINGS
LTASGRKKAGHYNRIPDSPSEPSTPLSGKVETLPSSIHFESQTDQTSILTKRKSNNDVDE
RPLKSAKPDEVGAPFAISKFPSDNKIQKKKRRSSDSSGSDSDSDSGSDSGSDDSDSTFGG
RKDRKKAAVGRTETPAARSSVVPTGTPGLAMTASPGSGRKAIEVPMWIQRALGNMRAKYA
RDSFLVIQKPRPADQPDAPPEWRAKCNDCPGRIYALGPGETLNNFEVHLKNKGHIGNRLA
REGKTQ
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atgaactatcaacagcaattcctcaacatggactccaataatggacagggcgacccagga
ccgtcttccatggcgcagcagaaccaaccgcgctttcgtccaccgtttccgggccagccc
ggtatgaatcctcaacagttagccatgctccagcaaatgtctcaagctgctcaagctcaa
gctgggcaaccgagtcaaggccagggtcggccgtcgctcacgtcccagcaaatacaaatg
gcgatggctagtatgcaggcgcaagctcaggcgcaaggattcaacatggcgaatatgaac
cctcaggcgctgatacaggcgatgagaaatcagcaactgaatcagaaccaacagcaaggg
atgcaagcgggatcgcaggtggggcaggggcagggtggccaagcgcagctggggcagcaa
aatcagcagcaagggcaacaacctcaagctcaaaatttggcagggtcatatcaacccggt
caaccacatccaaaccccgcacaactagcatttcagcaacagcggatagcccagttgatg
caggcgcaggggatgcaggctagacccggtggtccaggatcgcctatacggccgcctcaa
cagtttccccagcagcagcagcctcaacaacgtgcgggttcaatgcctcctccgcctgtt
cccgggcagcagccacaacagcaacaactgcagaactcgccatttcctcctcaacaaccc
aatccgcaacccactcctcaacccatgcaattatccctctcacctgcgcagcaacaaatg
ctcacccaacaacgccaaaccctgctgagtaacccccaatttcagtcaatgccgcctcaa
caacagcacataatcctgcaacaacaacaaaatcaatatctgaggatgatcgcgatgcag
caggctgccaatcagcagcaaggtggacaacatccgctccaaggtcagactcagccgtcc
tcacaacaacctcagcagcactcctcccaaggccgacccggttcatctcaaggtgtatcc
cagagccctgtcatccaccgccaacctacccctcaattagggggtacatcgcaacagtcc
cctttatcaagtctgcctcaacatatggcacaaccgagaccaggatcagcagcgtcccaa
agacctgtcacacctcaaactgggccgattggaccaggctcaccagctataagaacacct
ccagcaggtggaatgtttcagcaaccaccgcaacatatgtcgcacagtggcaatgcacct
tcacccactttatcaacacattcacatcatagccaacaacatcacacaccgcaacaaggt
ccgacgatggtgtcacccgtgctcccgaggatggacggtgggggtacgcctcaatctggt
caaggacaagggtcagggatgaacggtgagcccaaaggctttccactccagcagggtcaa
cctggtcatcaaggttcagtacaggaccccaataatattgggacgccatacagatcgttc
agaataccaggccagctggatgcccgtgctttcccgacattgccgacgaattatacgcct
gaacagcaacaacaggtggcttcagctctcactctgatgagtcgggcggttcaaggccaa
gggcaggggcaaggtcaaaatcaaaatcaagggcctgaaggtcagcaacaaggacaaggt
caacttcctcaaccgtctcagatgcaaccagcagttcgccctggtcctggctcagtccaa
gctccggcggttcctggtccaaattccaatatgccccgccctccaccaattcccctcgac
atcgacacctctgattttccctttgacccgcgtatcctccaatatcttccttacattggg
gacgctcagtggcgtacacaggttcaggcccagaatccaggactgtttgcggcggtacag
catgcagcaggaatgtggcagactataaggccggaagtgatgcagagaatgcaatcggcg
tttgttgctatgaagaatgccgcgcttagagggacacaacaaggagccccaatacagtct
ggccagccaggtcaacagggtcagcaaccgtcactaggacagcagcaagaattagtacaa
gcgcagcagcagcagcaacaacaacaactgcaacaacaacaaaaattgcaacaacaacaa
caacagcaacaacagcagcagcagcagcaacaacagcagcagcccgcacaaacaccagct
gctcagttggggccggcgcagttggcccagcaggcatggactcaacaacaggctgctcaa
gctcaggctcaaatgggagcccatgctcaagcacaagcccaagcacaagcacaagcacaa
gcacaagcacaagcacaagcccgaatgcaagcacaagagtctccagtgccaggaagtaat
atatcccctcccattcgcctccctgccacacctcatgtcgcgcctgctcccagctctcct
gttggccgccgaccatcaagttcaagtatgaaggatatcaagcgagatcgcacgccttcg
ggtagtggaccggttggtcagacttcgatgccgccgcctaactttataccttcgcataat
ggaaagccgccgtccgcattgggaggatcattggagcaagtcgttactgctactccccca
agcgctggtgcgggtgctacctcaatcccaacggcagcttctacctctacccctactgct
cctacacacattcctacacccatgcccgcaacggcagccgcacccacccgacaatcctta
tctggtcccagtttacccatcaaagaatgggccaccgcccttcacctcgatatcccagtc
accaaaatcagccccctccctgtcaatactattgatgaagctatcgacccaacgtttgac
ggccaactgcctccactgtcagagaaggagaaggtcaacattaaaaaatggctcgacaac
gatgtggcatttgtggccaagaaaaaagaaaggcaaccgagggtgttgggaaaaatgaaa
agatgggcggaagaggatgataggggtacagaatggtggatgttgagaaagggtgagaag
agggtgatgccgcagacaaaattgagagtcctttggcccagcgataaggagaggatgaga
gcacaaaggacgcacaagggaaggaggcaggtcaaattctcccaatcggacctcaaaaag
atggcagaagtcgaggatcacattgtgcctgtcaggctggagttggagcacgaagggcaa
aagttgaaggacactttcatgtggaattgctctgatactgttgttaccccggagctcttt
gcccatatcctttgcgacgactttgccgttccccaccagcattttgcgtcccgtatcgtc
gccgccatcgaagaacgtgtccgcgaatacaaggaccaagttcttccgttgcttgagagt
cgttccaaaggagattgtcaaggcaagcttgatcccgatggtgacgatgaagctcgtgcg
atgtgcgaagtcttccgcaaagcgcgggaaggaagcggcattgacgacgaaatcaagaca
gatcctggagaggaggatggtgcggaccacatcaggattgttacctttgatgatcaagtg
aatggcgttgatttggacgatgagcgaccatggactgtggaagaggccatgaccttagtg
ccaaaggagcttccccaggatttgagaatactgatcaaggtggatataattatcgggacc
cagaacttgacggatagctttgagtgggatcttcattcttcagtcactccagaagagttt
gcggcatcttatgtcaccgagctgggtttgagtatggaatttgcgaccgcaatcgcacac
gacattcgtgaacagatcctcatatatcagcgttccctttttcttgtcggccacaccgat
agctcttctgtcattcttgacgacgaagtgcgcggcgccttcttgcctcctgtcaccacc
actcttcgtaaagaagacatcgccatggcatcgtacacacccatcttcagcgagcttggc
cctgatcagttagcattgctcgaatcgcagcgagaaaaggagatgaagcgcaagaagagg
gctggccgcgctagacgcggtatcgtacttcctgagagggagcccgttaagactcaacgc
actttgctcaacaacctcggtcccaatggagttcctattttgttccaaactgacaatgtc
cctgttcgtgactccgctcctaccagtcgaagacgtggtgctgcccttgccgcggaggca
aacattaatctcctggctcaagatcttcctattcccgcatctgggtctcctgcacctcat
ttacctcatatgtctgctcgaggcaagcggcttggtagacctcccaagaacagagcgatc
agccccgtttctataagagaagagccccttgccaatggcggcactcccatcacaggtgat
atcaaaggtcggagaggatatttggatgagtcagtagatgagcaatccatcaatgggtca
ttgaccgcatccgggaggaaaaaggccggtcattataacagaattccggattcaccttct
gaaccctctactcctctctccggcaaggtagaaacgctcccatcatcaatacatttcgag
tcgcagaccgatcagacttcgattctcacgaagcgcaaaagtaataatgatgttgatgaa
cgaccactaaaatctgccaaacctgatgaagtcggagcgccattcgcgatttccaaattc
ccttctgacaataagatccaaaagaagaaaaggaggagttccgattcttctggaagcgat
agcgacagtgatagtgggagcgatagcgggagtgatgactcagactcaacatttggcggg
agaaaggataggaaaaaagctgcggtgggcaggactgagacgcctgcagcaaggtcctct
gtggtgccaactggaactccgggtctggcgatgactgcgtcgcctggctcgggaaggaaa
gctatcgaagttccgatgtggattcagagagctctgggtaatatgagagcaaaatatgcc
cgagactcgttcttggtcatccaaaagccccgaccggcagatcagccagatgcccctcca
gagtggagagccaaatgtaatgactgcccaggtcgaatctacgctctcggtcccggtgag
actctcaacaattttgaagtccatctcaaaaacaagggccatatcggcaatagattggca
agggaagggaagactcagtaa
DBGET
integrated database retrieval system