Cryptococcus deuterogattii: CNBG_1218
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Entry
CNBG_1218 CDS
T09796
Name
(RefSeq) pre-mRNA-splicing factor SLT11
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNBG_1218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdeu03041
]
CNBG_1218
Spliceosome [BR:
cdeu03041
]
Complex B
Other components
Prp19-related factors
CNBG_1218
Complex C
CNBG_1218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
Torus
zf_CCCH_4
zf-CCCH_2
zf-CCCH
RRM_YTH1
zf-CCCH_4
zf-CCCH_PARP12
zf-CCCH_3
RRM_1
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
88177584
NCBI-ProteinID:
XP_062881330
UniProt:
A0A095C3A6
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All DBs
Position
3:<413488..>414978
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AA seq
326 aa
AA seq
DB search
MPAKNDINKVGVESSDFPILCETCLGPNPYVRMNKQEFGHECKVCNRPFTVFRWNPGEGR
MKKTEICTTCAKIKGVCQTCLLDLEFGLPTQVRDAALARKAQAPSSDINKQYYIQNLEAQ
MAESPDGLAYDSEVANRAGREMLKNLARTDPYYKRNRPHICSFFVKGECKRGAECPFRHE
MPKENETHKPSQQNLVDRYYGRNDPVAKKILSQNAESKGLKAPEDKSITTLLFLGLPQCN
DSHVRASLVGACPFVKPSDVKSITIVETSHCAFVNFNQRSMAERAADALAAQGGIEVEGK
KAKVVWGRARPQKKTAAAVERSTIST
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcaaaaaacgatatcaataaagtcggagtggagagttcagacttccctatacta
tgtgaaacctgtcttggtcccaacccttacgttcgaatgaacaaacaagaatttggacat
gagtgtaaagtctgtaaccgtccctttaccgtattccgatggaaccctggagaaggtcgg
atgaagaagacagaaatctgtacgacttgtgccaagataaagggcgtatgtcagacgtgt
cttttggacttggagtttggattaccgactcaggttcgagatgctgctttggcaagaaag
gctcaagctccttcgtcagatatcaacaagcaatactatatccaaaaccttgaagctcaa
atggcagagtctccagatggccttgcttatgactctgaggtggcaaaccgcgcaggccga
gaaatgctcaagaatctcgctcgaacagatccttattacaagcggaataggcctcatatt
tgtagtttctttgtcaagggagagtgtaaacgaggagccgagtgccctttccgacacgaa
atgccaaaggagaacgagacccataagcctagccaacagaaccttgttgacaggtattac
ggtaggaacgatcctgtagccaaaaagatcttgagtcagaatgcggagagcaagggcttg
aaggcgccagaggacaaatcaatcacgaccctactgtttttaggattacctcaatgcaac
gattctcacgttagggcgtctctggttggtgcttgtccttttgtcaagccatctgacgtg
aaatccatcactattgttgaaaccagccattgtgcgtttgtcaactttaaccagcggtct
atggcggagcgagcggcagatgcacttgcggcccaaggaggcattgaagtagaaggaaag
aaggctaaggttgtttggggaagggcacgaccgcagaaaaagacggctgctgctgtggaa
agatcaacgatttcaacttga
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