Cryptococcus deuterogattii: CNBG_1287
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Entry
CNBG_1287 CDS
T09796
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CNBG_1287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdeu03021
]
CNBG_1287
03019 Messenger RNA biogenesis [BR:
cdeu03019
]
CNBG_1287
Transcription machinery [BR:
cdeu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CNBG_1287
RNA polymerase I system
CNBG_1287
Messenger RNA biogenesis [BR:
cdeu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
CNBG_1287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW2_Spt5
KOW4_SPT5
Spt5_N
KOW1_SPT5
KOWx_SPT5
KOW5_SPT5
CTD
KOW
Ribosomal_uL24m-like
Motif
Other DBs
NCBI-GeneID:
88177650
NCBI-ProteinID:
XP_062881396
UniProt:
A0A095C6Y4
LinkDB
All DBs
Position
3:608557..612605
Genome browser
AA seq
1152 aa
AA seq
DB search
MSDIEVKSSPPESPVEEQEETRLAGRKRARVVDPDEEDDDTQIVNNQDEEKDTKEEDDEE
EGNGQVEGTGEGEDDEDEDEDDDDDDEDEDDEDDDGERRTKRRRKQKRFRFLDVEAEVDD
EDEEEDEDNDYGDVAEFIDEAPEDAGARDDHQHRRLNRVFGRNEEEDVHDIVQRLKERHA
GAARYNGDSDAVPQRLLMPGVNDPSLWKVVVKSGREHAICASIFRKVFAQQYSANPIDVI
SVFCRDSIPGMIFIEARQSASVSAAVNGIVGIFMSKGVNLVPIEEMAPLLKMKKKDVNLT
PGMWVRMKRGKHAGDLAQVVDVDQITSGVVGIKFIPRIDLTPREKRKERIAIGKPGGVRP
PARLFAYDDVRKIYGRQSVRQGTQGSYLFDNDEYVDGFCIKDVKIPAVATEDVNPTLEEI
SRFTGDDDSTAKFDLSAIADANKNLSTSLLFPGDKIEVYEGEQTGLYGIVETVSPDVIAI
KAEGGEVHGQTVEVPARSVRKRFDVGEHVKVLGGKHTDASGMVVEVKGDIVTLMSDLGEQ
EIKVFSKDLRKAADTTNLTATKGLYDVHDMVMLDSTTAGVVTKVEGGLLRILDQNGAAKG
VSPEQVSLRRDNKRFAVATDSQGNDMKVGDSMKETDGEMRQGEVINIFRSIFVFLYNREY
TDNFGVFVARANSLVSVTPKSAVNDLTKINPALNQQLPYGGASLIAAPTANLNRNRLINT
LVVVTKGTSKGLIGVIKDVQGENARVELKHNNKTLSVNLASLKRKDQKTGATFPLEIAGV
ASAAGGYGSRLNAGQYDINPYGGATAMHPSMGGQTPALMGGRTPAVRFGQTPNPYSAGVQ
NGKTPNPYATGVGGKTPSAAYASGGKTPAWGASGGKTPAYGMASGGKTPAYGMQGGKTPN
PYAMGPPGPSGGRTPAYGVYGRPESSGSRPSAMPPPAAPYSAPYSAPTPAGNGAPTPAVP
GNPYTAPTPYGAPTPYAAPTPGMPALSAPTPGPGTNIAPTPFGAPTPYGAQSYGASAQQQ
RGLPWDWALDFRNVIVEIGPSYRPGSRNPLHFKRGFFDGKRFGYNDIIGESVRAILLDDP
SIVEEIPAEYLRPAKADSQGQVVVVIGGGPEQKGQQRTTQYENGGSWMMELEGGDMAPLV
VDGADLCRIWKV
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacatcgaagtaaaaagttcgccacctgagtcacctgtagaagagcaggaggaa
acaagattagccgggagaaagagagcaagagtagtggatcctgacgaggaggatgatgat
acccaaattgtgaataatcaggatgaagagaaggatacgaaggaagaggatgacgaagag
gaaggtaacggacaagtggaagggactggcgaaggtgaagatgacgaggatgaagatgag
gacgatgatgatgacgacgaggacgaagatgacgaagacgatgatggagagcgacgtacg
aagcgacgcagaaagcaaaagaggttcaggttcttggatgtcgaagccgaggttgacgac
gaagatgaagaagaggatgaagacaacgattatggagacgtcgctgagttcattgatgag
gcgcctgaggatgctggagctcgggatgatcatcaacatcgccgacttaatcgcgtcttt
ggacgtaacgaagaggaggatgtgcatgatatagtgcagagattgaaggagaggcatgcc
ggtgcagcgaggtataacggcgacagtgatgcagttccgcaaagactgcttatgcctggt
gtcaacgatccaagcttgtggaaggtggttgtcaagtccggccgagagcacgctatctgt
gcctcaattttccgaaaggtttttgcacaacaatattctgcgaacccgatcgatgtcatc
tccgtcttctgccgtgattccattcctgggatgatcttcattgaagcccgccaatccgcc
tctgtgagcgccgctgtcaatggcatcgtcggcatattcatgtctaagggcgtcaatctt
gttcccattgaggagatggcgcccttgctgaagatgaagaagaaagacgtcaatctcacg
ccagggatgtgggtgagaatgaagaggggcaagcacgcgggtgacttggcgcaggtggtg
gatgtcgaccagatcacgagcggtgttgtcggtataaagttcattcctcgcatcgatctc
acgcctcgggaaaagaggaaggagcgcattgccattggaaagcccggtggtgtccgccca
ccagctcgtctttttgcgtatgatgacgtacgaaagatctatggacgacaaagcgtgcgt
caaggcactcaaggcagctatctgtttgacaatgacgagtatgtcgacgggttttgcatc
aaggatgtaaagatccccgcagttgcgactgaggacgtcaatcctacccttgaagagatt
tcacgtttcaccggagacgatgactccaccgccaaattcgatctttctgctattgcagac
gcaaacaagaacctttctacatctctccttttccccggtgacaagattgaagtttatgaa
ggagaacagacagggctgtatggtattgttgaaaccgtgtctcccgacgtcattgctatc
aaggctgagggtggagaggtccatggccagactgttgaggtgcctgcgagaagtgttcga
aaacgcttcgatgttggtgaacatgtcaaggtgctgggaggaaagcatacagatgcgtcg
ggtatggtggtggaggtcaaaggagacattgtgactttgatgtctgatctgggcgagcaa
gaaatcaaagttttttctaaggatcttcgaaaagccgctgacaccaccaatctcaccgct
acgaaaggtttatatgacgttcacgacatggtgatgttggattcaacgacggcgggggta
gtgactaaggtggaaggagggttgttgagaatcttggatcaaaacggtgctgctaagggt
gtttcccctgagcaggtctcattaagaagggacaacaaacgttttgctgtcgccacagac
tcgcaaggaaacgacatgaaagttggtgacagcatgaaggaaactgacggagagatgcga
caaggtgaagtcatcaacatctttcgctccatctttgtgtttctctataaccgcgaatac
accgacaatttcggtgtcttcgttgctcgtgccaactctcttgtgtctgttactcccaaa
tcagctgttaatgacctcaccaagataaacccagcacttaatcagcagcttccttatggc
ggtgcaagtcttatagcagctcccacggcgaatctcaacagaaacagactcattaacaca
cttgtggttgtgacaaaggggacgagtaaggggttgattggtgtcatcaaagacgtacaa
ggtgaaaacgcaagagtcgagctgaaacacaacaataagaccctttcagtcaacctcgct
tcgcttaagagaaaagaccaaaaaactggtgcgacattccctttggaaatcgctggcgta
gcttctgcggctggtggttatggctctcgtctaaatgctgggcaatacgatatcaacccg
tacggcggcgcgacagctatgcacccctcgatgggcgggcagactccggccttgatgggc
ggaaggacaccagctgttcggtttggacagacacctaacccatattcggctggcgtacaa
aatggcaaaacgcccaacccgtatgcgacaggcgtcgggggcaagacaccatcagcggcc
tacgcctccggcggtaagactccggcgtggggcgcttctggaggcaagacaccggcatat
ggtatggcatcaggaggcaaaaccccagcgtacggcatgcaagggggcaagacccccaat
ccctatgccatgggtcctcccggtccttctggtggtcgaacaccggcatatggagtttac
ggtcgacccgaatcaagtggttctaggcccagtgctatgcctcctcctgccgcgccttac
agcgccccatacagtgcaccaacgccagctggtaatggagcaccgacacctgccgtccca
ggcaacccttatacagctccaacgccttatggtgcacccactccctatgctgcaccaact
cccggtatgcctgctctttcagcccctactcctggaccgggcactaatattgcgcctaca
ccgtttggggctccgacaccctatggtgcgcaaagctatggtgcttctgcacagcagcag
cgaggtctgccttgggattgggccctggacttcagaaacgttattgtggaaatcggccct
tcctatcgtcccggctctcgtaaccctctacatttcaagcgaggattctttgatggtaaa
cgatttggctacaacgacatcattggcgagagtgtacgggcaatactcttggatgaccct
tcaatcgtagaagagatacctgcggaatatctccgtccagctaaggcggatagtcaagga
caagttgtggttgtcattggtggcgggccagaacaaaagggtcaacaacggacaacccaa
tatgagaatggagggtcttggatgatggagctggaaggaggcgatatggcgcctttggtc
gtcgatggtgctgatttgtgtaggatttggaaagtgtag
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