Cryptococcus deuterogattii: CNBG_1614
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Entry
CNBG_1614 CDS
T09796
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CNBG_1614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdeu03021
]
CNBG_1614
Enzymes [BR:
cdeu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CNBG_1614
Transcription machinery [BR:
cdeu03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CNBG_1614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Pox_A9
Motif
Other DBs
NCBI-GeneID:
88178017
NCBI-ProteinID:
XP_062881698
UniProt:
A0A095D325
LinkDB
All DBs
Position
5:complement(1182526..1187772)
Genome browser
AA seq
1466 aa
AA seq
DB search
MDTWAVVDQNEKHYVSSDVPRRIKHIQFQPFTPKDIVRISEVQVSIAELYQNNEDGSRTT
ALQGPLDARMGPNEKGKKCATCGEDTQKCVGHYGYIKLVLPVFHIGYFRPTINMLSCICK
TCARVLLPETERASFLKRFRRPNLESLQRQSAAKAVLAACKKQNICTYCGAPNGIVKKSG
PLRISHEPYRAAKMASMKDEWMATFKNAVAENQAVATHLGKAVDDLNPLKVLNLFERITA
EDCELLSLHPDVGRPEDYIWQYISVPPPCIRPSVASEAGNNEDDLTAKLAEIVNYNNTLA
LMMDLGRGIEMISSNWEVLGQAVALYINSQAPGMQTIGSKPIRGFVQRLKGKQGRFRGNL
SGKRVDFSGRTVIGPDPNLRIDEVAVPEKVAVKLSYPERVTDYNLQLMRQAIINGSKLHP
GANVLERKHENGSTVRISLNVMKDLEARKRYARELQIGDVVHRHVRDGDIVLFNRQPSLH
KLSIMCHRVRVRPWRTFRLNECVCNPYNADFDGDEMNLHVPQTEEARTEALELMSVKKNL
VTPRNGEPIIAAIQDFITAAYLLSRRDRFYDRQQFTQIASYLGDANLKIEMPPPTLWKPV
RLWTGKQIFNLLMRPNKESKVLVNLEAKCRTLVDPAKEDRFPPDMSPNDGYLVIQNSEIM
CGVFDKNTVGDGKKNSVFGVILRDYGPEEAAQAMNRLAKIAARWLANIGFSLGINDVIPG
PILHASKDARVEKAYGECDVFIDLAKRGKLENAPGCDQEATLESKISKTLSDVREAVGKI
CMQELSRHNAPLIMATCGSKGSVINVAQMVACVGQQIIGGSRVRNGFQDRSLPHFRKKSK
NPPSKGFVRNSFFSGLTPPEFLFHAMSGREGLVDTAVKTAETGYMARRLMKALEDLCTHY
DLSVRNSVGGIVQFQYGDDMLDPACLEGDATPVEYVRSWTHACRTAGNQGRALFPYEVRR
IAARIYPESFIPPSPPPSPPKTKGRRRKEPTPPPPVVAPTLPKEWEGCHHKFRENTYKFV
VDKIVKQMVDQRLARGLPDADDEEMAEEYEALLYSDDPAVQRVLENANKVTEAQVNSFLE
NCRIRYLQAKIEPGSTVGAVGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINA
AKVISTPIIAAELAIPESETAARIVKGRIEKTVLGDIAAVIEESWTNANAYIEIHIDMDA
VRRLQLEISLESIKWALVRANKLKIPEGSIHISQKTSRIRIWIDESDKDKGVGIYERLKF
LKRAIPSVQVKGLPAIERGVVTKDEKNEKIHRLLVTGYGLSEVMGTEGVDGLKTKTNHVM
ETQQVLGIEAARSTIYNEIQTTMKSHGMSIDPRHVMLLGDVMTYKGEVLGITRFGVQKMK
DSVLMLASFEKTTDHLFDASLYSKKDEIQGVSECIIMGTPAPGCGTSLASIVTPAPPLPA
KKPLLFETAYKAGQHRMSKGMMVAAC
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atggatacctgggcggtggtcgaccagaatgagaagcactatgtgtcttcggacgttcct
cgtagaataaaacatatccagttccagccgttcacacctaaggatattgtccggatttca
gaagtgcaagttagcattgctgagttgtatcagaataatgaggacggatcaagaacaacg
gctcttcaaggacctctggatgctcgtatgggtcccaacgagaaaggaaagaagtgtgcg
acttgtggcgaagacactcagaaatgtgtagggcattatggttatatcaagctcgtcttg
cctgtattccatatcggttactttaggcctacaatcaacatgttgtcttgcatatgtaaa
acttgtgctcgtgtcctcctaccagagacagaacgcgcttctttcctcaaacgttttcgt
cgcccaaacctcgaatctctccaacgtcaatctgccgccaaagccgtcctcgcagcctgt
aagaagcaaaacatctgtacgtactgcggtgcccccaacggtatcgtcaagaagtccggt
cccctcaggatctcacatgaaccctaccgagcggccaagatggcgagtatgaaggatgaa
tggatggcaactttcaaaaatgcggtggcggaaaatcaggcggttgcgactcatttaggc
aaggctgtggatgatttgaatccgctgaaggtgttgaacttgtttgaaaggattactgcg
gaggattgcgaattactatcactacatcctgatgttggtagacctgaagattacatttgg
cagtacatttctgtacctcctccttgtattcgaccatcggtcgcttcagaggctggaaac
aacgaagatgatttgacagccaagcttgccgaaattgtcaactacaacaacactctggca
ctcatgatggacttgggtaggggtattgagatgatatcgtccaactgggaagtcttgggt
caagccgttgcgctgtatattaactctcaagcacctggaatgcaaactattggcagcaag
cccatccgaggcttcgtacaacgtctcaagggtaaacaaggtcgattccgaggtaacctt
tcgggtaagcgtgtcgacttctctggacgaacggtcattggccccgacccgaatcttcgt
atcgacgaagtcgccgttccagaaaaggttgccgtcaagctttcctacccagaacgagtg
acagattacaatctccagctcatgcgacaagcgatcatcaatggttccaagcttcatcct
ggtgccaatgtgctggaaagaaagcatgagaatgggtccactgtgcggatctcgctaaat
gtgatgaaggacttggaagcgaggaaaagatatgcgagagagttgcagattggggacgtt
gtgcaccgacatgtgagagatggagatatcgtgttgtttaaccgacaaccgtctttgcac
aagctttctatcatgtgtcatcgagtacgagtcaggccttggcgaacgttccggttaaac
gaatgtgtctgtaacccttacaatgctgattttgacggcgacgaaatgaatttacacgtt
ccgcaaaccgaggaagctcgtacagaagctctcgaactcatgtcggtcaagaagaacctg
gttacaccgcgaaacggagaacctatcattgctgctattcaggatttcatcacagcagcc
tatctcctttctcgaagagaccgattttacgatcgacaacagttcacgcagattgcttct
tacctcggtgatgccaacttgaagattgagatgcctcctcctactctctggaaacctgtc
agactctggactggtaaacaaattttcaaccttctcatgcgacccaataaagagtccaaa
gtactcgtcaatctggaagccaagtgccgaacgctcgtcgatcctgcaaaggaagaccgt
tttcctcccgacatgtctcccaatgacggataccttgtcatccagaatagtgagatcatg
tgtggtgtatttgacaaaaacacggttggtgacggaaaaaagaactcggtgtttggtgtc
attttgagagattacggacctgaggaagcggcgcaagcgatgaacagactagccaagatt
gcagccaggtggttagcaaacattggtttctctctcggtatcaacgacgtcatccccggt
cctatcctccatgcgtctaaggatgcccgtgtcgagaaagcttacggtgaatgtgacgtt
tttatcgaccttgctaagagaggcaagttggagaatgcgcccggttgtgaccaggaggcc
actttggaatcaaagatctcaaagacactttccgatgtccgagaagctgtcggtaagatt
tgtatgcaggaactgagtaggcacaatgcccctcttatcatggccacctgtggttctaaa
ggttccgtcattaacgtcgcccaaatggttgcttgtgtcggtcaacaaattattggtggt
tctcgtgttcgaaacggtttccaggataggtcgcttcctcatttccgtaaaaagtccaag
aaccctccatccaagggttttgtccgcaattctttcttctccggcctcactcctcccgaa
ttccttttccacgcgatgtctggtcgagaaggtttggtcgacactgcagtcaagactgcc
gaaaccggttatatggctcgtcgattgatgaaggcgcttgaagacttgtgtacgcactac
gatctgagtgttagaaattcggttggaggtatcgtgcagttccaatacggtgacgatatg
cttgatccggcttgtttggaaggtgacgctacgcctgtggagtacgttcgaagttggaca
catgcatgtcgaacggctggtaaccaaggacgagctctgtttccttatgaagttcgccga
attgccgctcgaatttatcctgaatctttcattcctcctagtccccctccatccccacct
aagacgaagggtcgccgtcgcaaggaacccactccaccgccgcctgtcgtcgcccctact
ctccccaaggagtgggaaggttgtcaccacaagttcagagaaaatacctacaagtttgtt
gtggataagatcgttaagcagatggttgatcagagactggcgaggggtttaccggatgcg
gatgatgaggaaatggcggaggagtacgaggcattgttgtactctgatgatcctgctgtt
cagcgtgtgctggagaatgccaacaaggttaccgaagcccaagtcaactctttccttgaa
aactgtcgtattcgataccttcaagccaagattgaacccggatctactgtcggtgccgtc
ggtgctcaatctattggtgaacctggtacacagatgacgttgaagactttccattttgct
ggtgtcgcttcgatgaacgtcactttgggtgtaccccgtatcaaggaaattatcaacgct
gcaaaggtcattagtacgccgattattgcggctgagttggccattccagagagtgaaacg
gctgcgaggattgtaaagggacgaatagagaaaacagttttgggtgatatcgcggcagtg
attgaggagagttggacgaatgcgaatgcttacattgagatacacattgatatggatgct
gtgcgacgactacaactcgaaatttcattagaatctatcaaatgggcattggttagggcc
aacaagctcaagatccctgagggctctatccatatttcacaaaagacttcacgtatccgt
atctggatcgacgaatcagacaaggacaagggtgttggcatctacgaacgtctcaagttc
ctcaagcgcgccatcccctctgtccaagtcaagggtctccctgctattgaacgtggtgtc
gttaccaaggacgagaagaacgagaagatccatcgattacttgtcactggttacggttta
tcagaggtcatgggtaccgaaggtgtcgacggtctcaagacgaagacgaaccacgtcatg
gaaactcaacaggttcttggtattgaagccgccaggtcaaccatttacaatgaaattcag
acgaccatgaagtcgcacggtatgtctatcgacccgcgacatgtcatgttgttgggcgat
gtcatgacctacaagggtgaggtgttgggtatcacacggtttggtgtgcaaaaaatgaag
gattcggttttgatgttggcgagtttcgagaagacgacagatcacttgttcgacgcttct
ttgtattcaaagaaggatgaaattcaaggcgtatcagagtgtatcatcatgggaactcct
gctcctggttgtggtacttctctggcgtctatcgtcactcctgctccaccattacctgcc
aagaagccattgctgtttgaaacggcatacaaggctggccagcatagaatgtcaaagggg
atgatggttgcggcgtgctag
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