KEGG   Cryptococcus deuterogattii: CNBG_1733
Entry
CNBG_1733         CDS       T09796                                 
Name
(RefSeq) uncharacterized protein
  KO
K12589  exosome complex component RRP42
Organism
cdeu  Cryptococcus deuterogattii
Pathway
cdeu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cdeu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CNBG_1733
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdeu03019]
    CNBG_1733
Messenger RNA biogenesis [BR:cdeu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     CNBG_1733
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     CNBG_1733
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 88178129
NCBI-ProteinID: XP_062881810
UniProt: A0A095C510
LinkDB
Position
5:862130..863233
AA seq 332 aa
MSVPLPTLSPAESSYIVTSLAHPSNPTRNDARPLFASRPIQISYDVFPQANGSAQVKVGG
TEIVSGVKLEVIDVVGQQIKGQETWRTKVEVDVTPQAFPNISAPSLSALSTHLTSIVASH
FIPSIPALPILPNKKYFQPHLHLTVLSSCGNIPSALILAARAAFADLKVPKTKVISWVGE
SGENANDGVDVGRGDMSGIKAAIATTKGKGKGKMIARGSEDWDLDLEDGEGVEFLEGRDA
LPVLVTLNMVPNSPNIFLDATPQEESACPTRIHLFFKPSSAGDLSKPKLCGLRLEGPDGL
DAGRVRGLLEQGASVASELIKEANRTIPSLDV
NT seq 999 nt   +upstreamnt  +downstreamnt
atgtctgtcccactcccaactctctccccggctgagtcatcttacatcgtcacctctctg
gctcatccctcaaatcccacaagaaacgatgcccgacctctcttcgcttctaggcctatt
caaatctcctacgacgtgttcccacaagcaaatggtagtgctcaggtcaaggtaggagga
acagagattgtctctggtgtaaagctggaagttatcgacgtcgttggacagcaaatcaag
ggccaagaaacgtggagaacaaaagtcgaagtcgatgtaacccctcaagcattccccaac
atctctgccccatctctttctgccctttctacacatttaacttcaattgtcgcttcccat
ttcatcccctccatccctgcccttccaattcttcccaacaagaaatactttcagccccat
ctccatcttaccgtcctctcctcctgtggtaacatcccttccgccttaattctcgctgct
cgtgcagcttttgctgacctcaaggttcccaaaactaaagtcatctcttgggtcggcgag
tcgggagaaaatgccaatgatggggttgatgttggaagaggcgatatgagcggtatcaag
gccgctattgccactaccaaaggaaaaggaaaggggaagatgattgcgaggggatctgaa
gactgggacctggatttggaagatggagaaggtgttgagtttttggagggaagggatgcg
ttgcctgtgcttgtgaccttaaacatggtgcctaattctcccaacatcttcctggatgct
acccctcaagaagaatccgcctgtccaactcgtatccaccttttcttcaagccttcgagt
gccggtgacctttcaaaacccaaactttgtggtttgcgattagaaggtcctgacggtctg
gatgctggtcgtgttagaggattgttagagcaaggtgcaagtgtcgcgagcgagttaatc
aaagaagccaacagaactataccaagtctagacgtctaa

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