Cryptococcus deuterogattii: CNBG_1930
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Entry
CNBG_1930 CDS
T09796
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNBG_1930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdeu03019
]
CNBG_1930
Messenger RNA biogenesis [BR:
cdeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CNBG_1930
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CNBG_1930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
88178313
NCBI-ProteinID:
XP_062881994
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All DBs
Position
5:315366..317849
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AA seq
688 aa
AA seq
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MALRKLQAEIDRTLKSVATGVEVFEATFDKLNYATNTTQKDKLENDLKTQIKKLQRMRDQ
IKAWLGNGDIKDKTALLENRRLIETQMERFKALEKETKMKAFSKEGLIAQSKLDPAEKAK
RDMIDWIGSTTDELSRQIEQTEAEVESLQVGKKKKQAGERLDELEELNERREWHIGRLEV
VQRMLENGQLTVGDVEDIQEDVKYFLEANMEEDFDFDNGIYDELNLQDEEDFHDYLHEHP
SATDELEAESEPVVTTPAPKTIAKEKEDKKATPHRLSKSEPRDKEEEIPPSPVVLKKTPS
RKTTLDKDKKDKKDKEKEDKERKEHEREEKEREERSSSSQPTPSKPAPLPPIKYAAAAAA
AVGGSVSASAPSQATPSVPSESSRDENVASPDEIAAAPISAYLPPPPPGLSRSPSQAATP
QASSPGTPSLQSRAPSTGPGTTDMTTPSQAPGSTLPPPGYPAPPSSSSAESSRAAAQAQV
AAEQAQVQAQAQAQAQAQAQAQNQLSAAQIQAQLQAAQEVQGQAGVMGNLMQSFEVAKEI
SKRRSDDANELHAALESSFANAPQQMDAEPPRYYHPQNPIKTPSYYPQSRLPILEDKSIY
SRLELDQLFYIFYYMTGTYEQWLAARELKKQSWRFHKQYLTWFQRAHNPQAITSDYEQGG
YYYFDWENSWCQRRKSDFRFEYRWLSDH
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaagaaaactgcaagcggagatcgaccgcaccctcaaatcggtcgctacgggt
gtggaggtgttcgaagctaccttcgacaaacttaactacgctaccaacacaacccagaag
gacaaacttgaaaatgatctcaagacccaaatcaagaagcttcagcgtatgcgagatcag
atcaaggcttggctgggtaacggcgacatcaaagacaagacggcgttgctcgaaaacagg
cggttgattgaaactcagatggaaagattcaaggcgcttgaaaaggaaactaagatgaag
gctttctccaaggaagggttgatcgcacagtctaaactggatcctgccgagaaggccaag
cgagatatgattgactggatcgggtcaactaccgacgaactatcaagacaaatcgagcag
acagaggcagaagttgaatctctccaagtgggcaagaagaagaagcaggctggagaaagg
ctggatgagcttgaagagctgaatgagaggagagaatggcatattgggaggctggaagtt
gtccagaggatgttggagaacggacaactaacggttggagatgttgaggatatccaagaa
gatgtgaaatacttcctcgaagcaaacatggaagaagactttgactttgacaacggtatc
tacgacgaactcaatcttcaagatgaggaagatttccatgactatcttcacgaacatccg
tccgcaacggatgagctcgaagctgaatcggagcccgttgtcaccacaccagcaccaaag
accattgccaaggaaaaagaagacaagaaagccacccctcacaggttgtctaaatctgag
cctcgagacaaggaggaggaaatccctcccagtcctgtggtattgaagaagacaccgtca
agaaagacgaccttagacaaggataagaaggacaagaaggacaaggagaaggaagacaag
gagcgcaaggagcacgaacgggaagaaaaggagagggaagaaaggtcttccagcagtcaa
cctaccccctccaaacctgctccccttcctcccatcaaatatgctgccgctgctgccgcg
gccgttgggggttctgtttctgcttctgcgccatctcaggcaactccttctgttccctca
gaaagttccagggacgagaatgttgcttctccggatgaaattgctgcagctcctatctct
gcgtacttgcctccaccacctccagggctttcgcgttcgccttctcaggctgctactccc
caagcctcctcccctggaactccgagccttcaatctcgtgcgcctagcactggcccggga
acgactgacatgactactcccagtcaagcgcccggaagcactcttcctcctccaggctat
cctgcgccaccatcttcatcttctgccgagtcttctcgtgctgctgcccaagctcaagtt
gccgctgaacaagcgcaggtacaggctcaggctcaagcccaagctcaagctcaagcacag
gctcagaaccagctttctgctgctcaaatccaagcccaattgcaggctgctcaggaagta
cagggtcaagcgggagtcatgggtaacttgatgcaaagctttgaggtcgctaaagagatt
tccaagcgacgttcagatgacgcgaatgagttgcatgccgctttggaaagtagttttgct
aacgctcctcaacaaatggatgctgagcctcctcgctactatcatcctcaaaaccccatc
aaaacgccatcgtactatcctcagtctcgacttcctatactcgaagacaagtctatctat
tctcgtctcgaactcgaccagttattctacattttctactacatgactggcacatacgaa
caatggctcgccgccagggaactgaaaaagcaaagttggaggttccacaagcaatactta
acttggttccagcgagcgcacaacccgcaagccattacaagtgattacgaacaaggaggg
tattactacttcgattgggagaacagttggtgtcagaggagaaagagtgatttcagattt
gaataccgatggttatcagatcactag
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