Cryptococcus deuterogattii: CNBG_1956
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Entry
CNBG_1956 CDS
T09796
Name
(RefSeq) DNA polymerase alpha subunit A
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CNBG_1956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdeu03032
]
CNBG_1956
Enzymes [BR:
cdeu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CNBG_1956
DNA replication proteins [BR:
cdeu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
CNBG_1956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
YL1
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
88178338
NCBI-ProteinID:
XP_062882019
LinkDB
All DBs
Position
5:240974..246400
Genome browser
AA seq
1494 aa
AA seq
DB search
MSKNALQALREARAKGGRLSQWKPEETEIYDSVTDEQYRSIVGSRNDQDDFIEDDDGGDY
VDHGLEDWNDAERDDEESEDEDDFEGEDEELRKARKLKRAKAKAKALANSGKAPKISKHK
SKATYSDYARPSTSSIYRAAAVPSAMQEDDFMANLLSSVTAASNETANRKRKSSPEIPSS
DGYQAPSSDGSFFSSRKRYGADSDDEPVWDAKRGVMGKKPRVSDATITPRRMNHDRNQEN
GHSLNDTMDVDDEAVKPEPVDSEEDEEIQVRKARLLTVTNKLNGSAGAKRRVINSSSVKN
IVKRESTPITVITPKAEPEMEEVQSAKPRVNGKPKAKANAKHWSAIQESLAAFPSNQTSE
LDTVNAPVGSTKPENVLEEDGSLRFFWLDHLEQDGVVHLVGKVLDKETGKYVSTCVSVTG
IERCLYLKPRAKRFVRGFETDLDVSEEDVLDEFESFRSQVGIDQYRCKFVKRKYAFEDKD
VEKGESDWLEVVYGFDQPAIPMDSSGATFSHIFGTNTTPFELFVVNQKIMGPSWLEIKDI
APSEKASSWCKLEFYVTDPSEVNPFSETDPSAPKDTPPFTIMSISLRTIVNHRENKTEIL
SVSMRTWDNYNIEDPTPPDQLRSQLNTIVRPIERFPNGLESKARTERSQFQTVKTERALL
NSMLGMIYRYDPDVMVGHNFLGGGFEALLYRMKELKADHWSRIGRFRRKGMNVSKMGNNV
KLMAGRLVADLSSDAAKGMISSTTWSLTEMTNTHLKVQREDIDPEDTAGYFDHTATSPDR
LIKFIRLCEVDAFFQMAIAARVQILPLTKQLTNLAGNSWNLTLNGGRAVRNEFILLHEFH
RLEYVCPDKAPYKVKTRPTGDDDEGTEDIIAMKGQRGKAKYAGGLVFEPKRGLWDKYIII
MDFNSLYPSIIQEYNIDFTTVDRDEDENAEEEKIPDVPSSDVPQGVLPRIIATLVNRRRQ
VKALMKDKSSSPAKLLQYDIKQQALKLTANSMYGCLGFAGSRFSSRPLAALTTFKGREIL
THTRELAESLQLDVVYGDTDSVFVNSNVTTYPEALKIANEFKKLVNERYKLLEIDLDAVF
ERILLLNKKKYAAVKIDEAGERSTEVKGLDMKRREFSKVSKDASAAVLKEILSGEATEVV
VEKIHELLTKLGEAVRNNDIPIDDYIIFKRLGKNPEDYPDKKSQPHVQVALRMKQKGATV
RAHDVIPYIICLDEHGKGGRTASADRAFHPDDLRRQGSELRIDHEYYLDQQILHPVLRLC
ETIEGTERARLAECLGLDPLRYASTGTAEAQGKEFFTFDSQISDTDRFRDADPLNLICPS
CSEETAFVGLSNDASMVSNIRANGIVCNSCQSIIHPASLELQLENQIRSHISKYYLGWMT
CDGEGCGLRTRAMSVYGKRCLGFIKENCWGTMRLEYTDAQLYNQLLYYRSLFDVEKILNA
VRGSQRFDEIRPLTTANQQVFSELVAVTDMYLDKNGRRYVDLKSLFGFMERIKI
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaacgctttgcaggctttgcgagaagctcgcgcgaagggcggccgactttca
caatggaagcccgaagaaacggaaatttacgactctgtcacagacgaacagtatcgctcc
attgtcggctcgcgtaatgatcaagacgacttcatcgaggatgacgatggtggtgattat
gttgaccacgggttggaagactggaacgatgcggagagagatgacgaggagagtgaagat
gaagatgattttgaaggggaggacgaggagctgaggaaagcgcggaaattgaaaagagca
aaagccaaagccaaagcactcgccaattcgggcaaagctcccaaaatatcaaaacacaaa
tccaaagcgacctactctgactatgcccgaccctccacatcatcaatctaccgtgctgcc
gccgtccccagcgccatgcaggaggacgattttatggctaacctcttatcctcagtgacc
gccgcgtcaaatgagacagctaaccgcaaacgcaaatcttctccagagatcccttcttcc
gatggctaccaagctccaagttccgatggctcattcttttcatcaaggaaaaggtatgga
gcggatagcgatgatgagcctgtgtgggacgcgaagcgcggtgtgatgggcaagaaacct
cgagtttcagatgctactatcactccaagaaggatgaatcacgacagaaatcaagaaaac
ggacattcattgaacgatactatggatgttgacgatgaagctgtcaaacccgagcctgta
gacagtgaggaagatgaggagattcaagtgcgcaaagctagacttctcacagtaactaat
aaactcaatggttcagccggtgctaaacgcagagttatcaactcatcatctgtcaagaat
atagtcaagcgggaatctacaccgattactgtcatcaccccgaaagctgagccagaaatg
gaagaagtccaatctgccaagcctcgtgtcaatggcaaacccaaagccaaagcaaacgcc
aaacactggtctgccatccaagaatctcttgcagcttttccttccaaccaaacgtctgag
cttgacaccgtgaacgcccctgttggttcaacaaagcccgagaatgtactggaggaggat
ggttcattaagattcttctggcttgatcacttggagcaggacggagtggttcatctcgtg
ggtaaagtgcttgacaaggaaacggggaagtatgtcagcacttgtgtctcggtgacggga
attgagcgatgtctctatctcaagcctcgtgcgaaacgatttgtacgcggatttgaaacc
gatctcgacgtgtcggaggaagacgttttagacgagtttgaaagtttccgttctcaagta
ggtattgatcaataccgttgcaaatttgtcaaacgcaaatatgcctttgaggataaggat
gtggaaaagggagaaagcgattggttagaggttgtttatggttttgatcaacctgccatc
cccatggactcgagtggtgcgactttcagtcacatctttggcacaaataccactcctttt
gagctgttcgtcgttaatcagaagattatgggtccttcatggcttgaaatcaaagatatc
gctccttccgagaaggcttcatcatggtgcaagcttgagttctacgtgaccgatccttca
gaagtcaacccgttctccgaaactgacccttccgcccctaaagacacacccccctttacc
atcatgtccatttcccttcgcaccattgttaatcaccgcgagaacaagactgagattctg
tccgtctctatgaggacgtgggataattataacattgaagaccccacccctcctgatcaa
ctccgatcccagctgaacaccatcgtccggcctatcgagcgatttcctaacggccttgaa
tccaaagctcgaacagagaggtcacaattccaaacggtaaaaacggagcgagcactactc
aactctatgttgggtatgatttaccgctacgaccccgatgtcatggttgggcacaacttc
ctgggaggcggatttgaagcgttattatataggatgaaagagctcaaagcagaccattgg
tcgaggataggaaggttcaggagaaagggaatgaatgttagtaagatgggaaataatgtg
aagctcatggccggtcgattggttgcggatttatcaagcgatgctgccaagggtatgatt
tcatcgacgacttggtctcttaccgaaatgaccaacacccatctcaaagtgcagcgcgaa
gacattgacccagaagacaccgccggttattttgaccatactgccacttcacctgacagg
ttgatcaagtttatcaggctgtgtgaggttgatgccttcttccagatggctatcgctgcg
agagtacaaattttgccattgaccaagcaactgaccaacttggctggtaattcttggaat
ctgaccctcaacggtggccgtgcggtccgtaatgagtttatccttctccatgagttccat
cgacttgagtacgtctgtccagacaaggccccttacaaagtaaagactagaccgaccggg
gatgatgatgagggtacggaagacatcatagctatgaagggccaaagaggaaaggccaag
tatgctggcggtttggtctttgaacctaaaagaggattgtgggacaagtacatcatcatc
atggacttcaactcgctttatccaagtattattcaagaatacaacatcgattttacaacg
gtcgacagggatgaggatgagaatgcggaagaagagaagattccagatgttccttccagc
gatgtacctcaaggtgtcctaccccgtattattgcaactctcgtcaatcggcgtcgtcaa
gtcaaggcccttatgaaggataagtcctcaagcccagctaagcttttacaatatgacatc
aagcagcaagcccttaaactcactgccaactcgatgtacggttgtcttggttttgccggc
tctcgattctcctcgagaccattggcagcactgacgacgttcaagggtcgagagattttg
acgcacaccagggagttggctgagtctcttcaactggacgtcgtctatggggatactgat
tcggtctttgtcaactccaatgtcacaacttatcccgaagctctcaaaattgccaatgaa
tttaagaagctcgtcaatgaacgatacaagctccttgaaattgacttagacgccgttttc
gaacggatcttgcttctcaacaagaagaagtatgctgcggtcaagatcgacgaggctggg
gaaagaagcactgaggttaagggtttagacatgaagagaagagagttcagtaaggtctca
aaggatgcgagcgctgcggtactgaaggagatcttgagtggtgaagctacagaggtagtg
gttgagaagattcatgagctgctcaccaagctcggggaggctgtacgcaacaatgacatt
cccatcgatgattacattatcttcaagcgtcttggtaaaaacccggaagattacccagac
aagaaatctcaacctcatgttcaagtcgcccttcgtatgaaacaaaaaggtgccactgtt
cgagctcacgacgttattccatatatcatctgcttggatgaacatggaaagggcggaagg
acggcatctgcggatagggctttccatcctgatgatttgagaagacaagggtcggaatta
agaattgatcacgagtactaccttgatcagcagattctacatccagtcctgagattatgt
gagactatagaaggtactgagcgagcgcgattagcagaatgtcttggtcttgatcctttg
agatatgcctcaacgggcacagccgaagctcaaggaaaagaattcttcacctttgactcc
cagatttccgataccgaccgtttccgcgatgctgatcctctcaatctcatctgtccctct
tgtagtgaggaaacagcgttcgtaggcctgtcaaatgatgcttccatggtgtccaatatc
cgagcaaacggcattgtttgcaactcttgtcagtcgatcatacaccccgcctctttagaa
ctccagcttgaaaaccaaattcgatcccatatctcaaagtactatctcggatggatgact
tgtgatggtgaaggttgtggattgagaacaagggccatgagtgtatatggaaagagatgt
ttagggtttatcaaggagaattgctggggtacaatgaggcttgagtatacggatgcacaa
ctgtataatcagctcttgtattaccgcagtctgtttgacgttgaaaaaatcctcaacgct
gtgcgtggctcgcaacgtttcgatgaaatccgacccttgacaaccgccaatcaacaagtc
ttctcagaactggtagctgtcacagacatgtatcttgacaagaacgggagaagatacgtt
gatttgaagagcctgtttggattcatggaaaggatcaagatttga
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integrated database retrieval system