Cryptococcus deuterogattii: CNBG_1968
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Entry
CNBG_1968 CDS
T09796
Name
(RefSeq) rhamnogalacturonan lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cdeu
Cryptococcus deuterogattii
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CNBG_1968
Enzymes [BR:
cdeu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CNBG_1968
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Gene cluster
GFIT
Motif
Pfam:
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
88178350
NCBI-ProteinID:
XP_062882031
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Position
5:204111..207297
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AA seq
676 aa
AA seq
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MMKRLGLITTSLVVTGVTAKITYSETNDTITLASDRLTLGVNKTLGAMTGLEFDHVDVLG
PVSGRIGMGYFDCYCIPAVNTSVWTPDNPNPQSSRHYYVGQSQKASFEVHQGNDSNNNPW
IGLTMSETYEGTGQFFQQWWFLRDGEPGYHTFTRLQFDNGTEGIDLGNLQEFRQVISPNS
NIWTHLVTNDVQYGHLPSDEAIGNQTTVQDATWYYNITEGNPYKAESSDYFTKYEWADLY
GDHFAHGFYADGTTSNGSTLGFWTVFNNLEGYTGGPLRSDLVVDTNIYNYYASNHRGAST
MNITSGFDRIFGPTFIYLNKDGDLHSLYDDAKSYANTSFAVEFYDDVADLIPGYVNSSGR
GDFKARISLPKGASKPKIILAQSGVDPQDNVDYSAKQYWANVSSDGSVTIPRVQAGTYRV
TLYAEGVFGQFEQDGVVVRAGDGDGDKFQINWEAERHGIELWRLGVPDKTAGEFLHGFTK
DPQHTLHQEEYRQYWGAWDFPTDFPEGVNFTIGVSDPSKDWNYVHYSRYGGSFTRPEYVL
DNVNVWTVNWVPEGGLDVTGKMAALTVQLAGARTASGNLDLPEPTSNYSNVDYTVNVNGN
PLTWTILYNQSSSCSDRSGIACYNLRNVFTFPGEWLKNDTNVFEFVLPYNASGGDVNFRN
YSISVLYDAIRLELSD
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagagacttggccttataactacatctttggtcgtgacaggtgtcacggctaag
attacctactctgaaacgaatgacaccattactctagcttctgatagattgactctaggg
gtaaataagacgttgggcgctatgacaggccttgagtttgaccatgtggatgtcttgggt
cctgtatctggccgtattggtatgggatattttgactgctactgcatcccagccgtgaat
acttcggtgtggacgccagacaacccaaacccgcaatcatctcgccattactatgttggc
cagtctcaaaaggccagttttgaagtccaccaagggaatgacagcaataacaacccttgg
attggcttgactatgagcgaaacgtacgaaggtaccggtcaattcttccagcaatggtgg
ttcttacgtgatggagagcctggctaccacactttcaccagactccagttcgacaatggg
actgagggtatagacttaggtaatttgcaagaattccgccaagttatctctcccaatagc
aacatttggacccatctggtgacgaacgacgtccaatacggacatctcccctctgatgag
gccataggtaatcagactactgttcaagacgctacgtggtactataacattaccgaaggg
aacccgtacaaagcagaatcttctgactacttcaccaagtatgagtgggcagatctctat
ggcgatcactttgcccatggtttctatgcagatggaacaacctcgaatggttcaaccctt
ggcttctggacggtatttaacaacctcgaaggatacaccggcggacctttgcgttctgat
ctagtagtcgataccaacatctacaactattatgcgtcaaatcatcgtggcgcctcaact
atgaatatcacgtctggctttgatcggatctttggtccgacattcatctatttgaataag
gacggtgaccttcacagcctctatgacgatgcgaagagttatgccaatacttcttttgct
gtcgagttttacgacgatgtcgccgatcttatcccaggttatgtcaactcgtctggtcga
ggcgacttcaaagctcggatcagcctaccaaagggtgcaagcaagccaaaaattatcctg
gcgcagagcggagttgatccccaggataatgttgattactctgccaagcagtactgggcc
aatgtatcctctgacggcagtgtcaccattcctcgagtccaagctggcacttaccgagtt
actctttacgctgaaggcgtcttcggtcagtttgaacaagacggagtggtagtccgtgcc
ggtgacggagatggtgataagttccaaatcaattgggaagccgaacgtcatggtatcgaa
ctttggaggcttggggtcccagataagaccgctggcgagtttcttcacggtttcaccaaa
gatccccagcatacccttcaccaagaagaataccgacagtactggggcgcatgggacttc
ccgaccgatttccctgagggtgtgaacttcacgatcggcgtcagtgacccctcgaaggac
tggaactatgtgcactatagtcgatacggaggctcatttactcgaccggagtatgtactg
gataatgtcaatgtctggactgtcaactgggtgcctgaaggtgggctagatgtcactgga
aagatggccgctcttacggtgcaactagccggcgcacgcactgcttccggtaaccttgac
ttacccgagccgacgtccaactattccaatgtggattatactgtcaacgtgaacggcaat
cctctcacttggaccatcctttacaatcagtcttcgtcttgttcagataggagtggcatt
gcttgttacaatttgagaaatgtgttcacgttccctggagaatggctgaagaacgatacc
aacgtgtttgagtttgttctcccttacaatgctagtggtggggatgtgaacttcaggaat
tactcgatttctgttttgtatgacgctatccggcttgagctctctgattag
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