KEGG   Cryptococcus deuterogattii: CNBG_2045
Entry
CNBG_2045         CDS       T09796                                 
Name
(RefSeq) Prp8 binding protein
  KO
K12857  Prp8 binding protein
Organism
cdeu  Cryptococcus deuterogattii
Pathway
cdeu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cdeu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CNBG_2045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cdeu03041]
    CNBG_2045
Spliceosome [BR:cdeu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    CNBG_2045
 Complex C
   U5 SnRNP specific factors
    CNBG_2045
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_IFT140_1st WD40_like Beta-prop_WDR35_TULP_N Beta-prop_RIG_1st TibC_1st PEP5_VPS11_N eIF2A
Other DBs
NCBI-GeneID: 88178422
NCBI-ProteinID: XP_062882103
LinkDB
Position
7:1195048..1196441
AA seq 374 aa
MSVRKSPPTAGPGMALSKRARVEDEADENTMVMTVASSGEGQRKNALIRSVKRTSSLEAP
IVSLSAAHGGEITACVFDPSGQTLAASSVDRSISLWKTYPPHDNYGILPNVHKTAILDIA
YSLDSETIYSGAADGTLISTDLRTGERISRYSAHYGPLNSISVTISGGRELVLTGGDDGI
ARVWDFALDGKDPVAEFDDERDCPVTAVEWSSDGNQCFVGGVDNTIKVWDLRTTKVLYTL
HGHTDTIASLSLSPNGHYLASYALDSALIIYDVRPFSSDPMRVYRSLTGAPAGFEQTLIR
CAWTKHDGGQRIAVGGGDRTVTVWEVETGKVLYKLPGHKGTVTGVDCHPREPIILTGSKD
TNMLLGELDAQDFS
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgtccgtcaggaagtcgccacccacagcaggcccgggaatggccctctcaaaacgcgct
cgagtggaggatgaggccgacgaaaacaccatggtcatgaccgttgcttcttcaggggag
ggacagcggaaaaatgctttgataaggagtgtcaagaggacgagcagtctcgaagcgcct
attgtgtcattgtcggctgctcatggtggcgagattacggcttgcgtgtttgacccctca
ggacaaactcttgcggctagttcggtggatcgcagcatttccttgtggaagacctatccc
cctcatgacaactatggcatccttccaaacgttcataaaaccgctatcctcgatattgcg
tactccctcgactctgaaaccatctattccggtgctgccgatggcacactcatatctact
gacttacgtaccggtgaacgcatttcccgctattctgcacattatggccctttaaactct
atatccgttaccatctctggcggtcgagagctcgtgttgacaggtggcgatgatgggatt
gcccgtgtatgggatttcgcgctggatgggaaagaccctgtagcagagtttgatgatgag
agagattgtccggtgacagctgtggaatggagttcagatgggaaccagtgtttcgttggc
ggagttgacaacaccattaaggtctgggacttgcgaacgaccaaagttctatacacgctt
cacggccacaccgacaccatcgcttccctttccctctcccctaacggccactacctcgcc
tcctacgctcttgattccgctctcatcatctacgacgtccgacccttctcatccgatcct
atgcgtgtgtacagatccctcacgggcgcacccgcaggttttgaacaaacccttatacga
tgtgcgtggacaaaacatgatggcggacaaagaatagcggtaggaggtggagataggact
gttactgtttgggaagtagagacaggcaaggtgctgtacaagcttccggggcataaagga
actgtgactggtgtggattgtcaccctagagaaccgatcatcttgacaggatcaaaagac
acaaacatgttgctcggcgagctggatgctcaagatttctcatag

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