Cryptococcus deuterogattii: CNBG_2258
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Entry
CNBG_2258 CDS
T09796
Name
(RefSeq) uncharacterized protein
KO
K18748
protein SSD1
Organism
cdeu
Cryptococcus deuterogattii
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdeu03019
]
CNBG_2258
Messenger RNA biogenesis [BR:
cdeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
CNBG_2258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Dis3l2_C_term
CSD2
Rrp44_CSD1
OB_HELZ2
Rrp44_S1
Motif
Other DBs
NCBI-GeneID:
88178622
NCBI-ProteinID:
XP_062882303
LinkDB
All DBs
Position
7:complement(598735..604510)
Genome browser
AA seq
1671 aa
AA seq
DB search
MMADPVSPTPDHQSQATLAPPPVNPSRPSSANSQKSNSSRNRGKNGSRGSSNMSRTNSNT
SGQSDSGRSDKKRQSGPTTTISGGVSLGVSGEALQQGKKGKGKGKNQDREKEGERKDISM
GVEKPQKNNSQKGRRSASGRRPQLIGTSESPRTVSRNSEGVSIPADAGSSQSAPGPKSIH
APVSAPRTAIEAAVEAATEKHRLQTGGDALASLQKMISDLKTLPPTSGPGSGSSAGSRST
SVTRDRPTSSSAKAEPVAIPSASNSGSHKTLKADAPTFTPSFQSFSPVASTSGLSVSPTN
TMPTLAQSHPRSQSQSNGAHPRRNSASSMSSVNFAPPFNPSPIQAFGNPLPPFYQTPLSV
HTEADDESLSSLSFAQHANFQYQQQQLLAAQQQQYQYIQLLQAQLAASQLAHQQAQQAAQ
HQNQQMGNFIAPRFQALAAQRAASLQQQQAAQLAQAQQVFELQQAQLLQQQEEARTSIQA
AVEAAHPQNQPVFEEESPELQPRTVGPSGRPQLAPSFTFGARPKHGATESVSERGSGRES
LSPPQSSLSPIVVNRSEGIGGAAATGLAGLAARAHKRTGSEMSSVLQQQLAIQQEIEALQ
AKQKALMQQDLAQQGDSPLAQLNTAYAQKPTPSQNVSRHRRVQSSVPSASVPVDFEREQD
QPRSMKSVGEMPPPSLPSGHGRRHSVNVLNKTAGSGIGFGLADDIPEGVVAPSGHHRSGS
RSGLESGSWRLGASSGNAQSSQSQVADLAAAQAQLQSLAQFRAAAGGGHSKMASFSFPNM
LPNLLAATTLQAPVGQSLWQQQQAFQMQLQQTTQGPQRKSLFAPYLPQASLPPLLQAGKL
VVGVLRVNKKNRSDAYVATDVLDADIYICGSKDRNRALEGDIVAVELLDVDEVWSTKKDK
EEKKRKKEENATYDLKPSTLKKLEKKKDDVEVEGQGLTLFDDEEVNDDTKPTYAGHVVAV
VERMPGQLFSGQLGVLRPSSAATKEKQELERREREGDKARKEEPETRPKIVWFKPTDKRV
PLIAIPTEQAPGDFIDNPDAYSNKLFVATIKRWPITSLHPFGTLVEELGTIGNSEVETSA
LLKDCNFPTEEFSEMTMKCLPPMPWNVPEREYDVRTDLREERVFTIDPHHAKDLDDALSF
KDNKDGTFTVGVHIADVSFFVKANTQLDREARKRATSVFLVQRAVPMFPPVLSEDLCSLV
PDTERLTFSAIFIVDEEGNVLQKKFAKTIIKSCAKLTYDDALTVVNGGALPRSKTSGTHL
ATDIEGDIRSLHSIAKKMRARRIENGAMVVSSLKVSFEFDAQGRPVDCQTYQKGKASTIV
EEFMLLTNQSVAHIIANALPEQALLRRHEPPSERRLASFVTRASKLGFDMDPTSAGTLQK
SFENVVDNDSALCIDLLRKKVIQRARYFCAGMLDIAKYAHWGLNAPLYTHFTSPIRRYAD
VIVHRMLDACLTSPNPNEVKFLMDRDQVAKAAQQCNMKKQSAKLAEEQSVHLFLCILIND
LTEHYGPVVREARVTNVLETAFDVIIPEFGVEKRVHVDKMPVETAVYDEHRDILSLYWTT
KDVISHLADTTEDRHLLKVKSLGEQRALGSPVSKATDDSALFDGNNAGVVSKQYAKSANP
SPLKFEGLRSVDGGHKVQDIKELMTLPVIITSDMTKSPPVLVVYACNPYAT
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgaccctgtgtccccaactcccgatcatcaatctcaggccacccttgcgcca
cctcccgtcaatccttctcgtccaagttctgcaaactctcaaaagagtaattcttctagg
aatcgtggtaaaaatggaagtcgaggatcatctaacatgtctcgaaccaattcaaacact
tctggtcagtcagacagtgggcgaagcgataaaaagaggcagagcggtcccaccaccaca
atcagcggtggtgtaagtttgggtgtgagtggagaggcacttcagcaaggcaagaaaggg
aaaggcaaaggaaagaaccaggatagggagaaggaaggcgagagaaaagacatctcaatg
ggggttgaaaaacctcagaagaacaacagtcagaaagggagaaggtctgcctcgggaagg
agaccgcagctcatcggtacaagtgaatccccgcgtactgtgtcgcgaaactcggagggt
gtcagcataccggcggatgctggctcgtcgcagtctgcgcctggaccaaagtctattcac
gcccctgtgtctgctccacgcactgcaattgaagccgcggtggaggctgcgaccgagaag
cacagattacaaacaggtggcgatgccctggcgagcttgcagaaaatgatttccgatcta
aagacccttcctcccacctctggacctggaagtgggagttctgccgggtcgaggtcgact
agtgtcactcgggaccgtcccacttcttcgtcggctaaagccgagcctgtcgctattcct
agtgcctccaactcgggatcccacaagactttgaaggctgatgcacctacattcacccct
tccttccagtcgttctctccggttgcctccacatcaggtctttcagtctctcccactaac
accatgccgacactcgctcaatcgcatcctcgctctcagtctcaaagtaatggggcccat
cctcgcagaaattctgcgagctccatgtctagcgtgaactttgcccctcccttcaaccca
tcgcctatccaggcttttgggaaccctctccctccattctatcagaccccattatcagtc
cacactgaagcggacgacgaaagtctttcgtcgttgtctttcgcacagcatgctaacttc
cagtatcagcaacagcagctccttgcagctcaacaacagcagtatcagtacattcaactt
ctccaagcgcagcttgcagctagtcagcttgcccatcaacaagctcaacaagccgcacaa
caccagaaccaacaaatgggaaacttcattgctcctcgtttccaagcgcttgcagctcaa
agagctgcctctctgcaacagcagcaagctgctcagcttgctcaggcccaacaagtattc
gagcttcaacaggcccagctgcttcaacaacaggaagaagctcggacgtccattcaggct
gctgtggaagctgctcaccctcagaatcagcctgtattcgaagaggaatcccccgagctc
caaccccgtaccgttggaccgtccggtagacctcagcttgctccttctttcacctttgga
gctagaccgaagcacggcgccacggaaagtgtgtcggaacgaggttccggaagagaatcg
ttgtcgcctcctcaaagcagtctgtcacctattgtggtgaatcgaagcgaaggtattgga
ggtgccgctgccactggacttgcaggcctggctgctagagcacacaagagaactgggagt
gaaatgtcatcagtcttacagcagcagcttgctatacaacaagagatcgaagccctccaa
gctaagcagaaagctctcatgcaacaggatttggcccagcaaggcgacagtccgcttgcg
caactgaacactgcatacgctcagaagccaacgccctctcaaaacgtctcccgccatcgc
cgcgtgcaatcaagcgtgccttcggcttctgtccctgtcgacttcgaacgcgaacaagac
caacctcgttcaatgaaatctgtcggcgaaatgcctcctccatctttaccatcaggtcac
gggagacgccacagcgtcaacgttctcaataagactgccggttctggtataggcttcggc
ttggcggatgacattcctgagggtgttgtagctccctctggacaccatcgatctggtagc
cgatcgggacttgagagtggcagctggcgtcttggtgcatcatcgggcaatgctcaaagc
agtcagagccaagttgctgaccttgcagcggcccaagcccagcttcagtctctggcacaa
tttcgagcagctgctggtgggggacactccaagatggcttcgtttagcttccccaatatg
ttgccaaacttgcttgctgcaacaactctgcaggcaccggttggccaatctctctggcaa
caacagcaagcatttcagatgcagttgcagcagacaactcaaggtcctcaacgcaagtct
ctctttgcaccctatcttccccaagcttcattaccgcctctccttcaggctggtaaactc
gtcgttggcgtactgagagtcaataagaaaaatcgatccgatgcttatgtagctacagac
gttttggatgccgatatatacatctgtggctcaaaggacaggaacagggcgcttgaaggt
gacatagttgctgttgagttgctggatgttgatgaggtgtggagcacaaagaaggataaa
gaggagaagaagaggaagaaggaggagaacgcgacgtatgacctgaagccctcgactttg
aaaaaactcgaaaagaaaaaggatgatgtggaggtcgagggtcagggcttgaccttattt
gacgatgaagaagtgaatgacgacacaaaacctacttatgctggtcacgtcgtggccgtg
gttgagcgaatgcccgggcagttgttctccgggcagcttggtgttctccgtccatcctca
gcagccacgaaagaaaagcaagaacttgaacgtcgcgagagggagggcgacaaagccagg
aaggaagagcctgagacccgcccaaagattgtctggttcaagccaacggataagcgagtg
ccattaattgccattcctactgaacaagctcccggcgatttcatcgacaaccctgacgcg
tatagtaacaagcttttcgtggctacaatcaagcgatggcccatcacctcacttcatcct
ttcggtactctcgtggaagaacttggaaccatcggcaactctgaagttgagaccagtgcc
ttgttgaaggattgtaacttccccactgaagagttctctgaaatgaccatgaaatgtttg
ccacctatgccgtggaacgtcccggagcgagagtacgatgttcgaacggatctgagggag
gagagagtcttcacaattgacccacaccacgcaaaggatttggacgacgctctttctttc
aaggataacaaagacggaacttttactgttggcgttcacatcgcagatgtatccttcttt
gtcaaagccaacactcaacttgaccgggaagctcgtaaacgtgccactagcgttttccta
gttcagcgcgctgtcccgatgttcccacctgtgttatccgaggatctgtgcagtcttgtc
ccagatactgagcgactaacgttttcggctattttcattgtggacgaggaaggcaatgtt
ctgcaaaagaagtttgcgaagaccatcataaaatcttgcgccaaattgacctatgacgac
gctcttactgttgtaaacggtggcgccttgccccgatctaagacttccggtacacactta
gctactgatattgagggagatataaggtcattgcattccattgccaaaaaaatgcgagcc
agacgaatcgaaaatggggcgatggttgttagctcattaaaagtgtcgttcgagtttgat
gctcaaggtcgtccagtcgattgccagacgtatcaaaagggcaaagcatctacaatcgtg
gaagaatttatgcttctcacaaaccagtcagtggctcacattattgcgaacgcccttcca
gagcaagccctccttcgccgccatgagcctccctcggagcgcaggctggcatcatttgtc
actcgagcaagcaaacttggctttgatatggatcctacgagtgcgggaactttgcaaaag
tcatttgaaaatgtagtagacaacgactctgccctctgcattgatcttttgaggaagaag
gttatacaaagggcccgatacttctgcgctggcatgctggatattgcaaaatacgcacac
tggggtttaaacgctccattatatacccatttcacttctcccatccgtcgctatgccgat
gttatcgtccaccgcatgcttgatgcctgcttgacaagtcccaacccaaacgaagtcaag
ttccttatggacagggaccaagtagccaaggcagctcaacagtgtaatatgaagaagcag
agcgccaagctggctgaagagcaatcagttcatctcttcctttgtattctcatcaatgat
ttgacggaacactacggccctgttgtccgtgaagctagagtaacaaacgttcttgagact
gcatttgatgtaatcattcccgaattcggcgtcgaaaaaagagtgcacgtagacaagatg
cctgtggagacggctgtctacgatgaacatcgcgatatcctatcgctatactggacgacg
aaggatgttatctcacaccttgccgataccaccgaggatagacacttactgaaggttaaa
tctcttggagaacaacgtgcccttggatcccctgtttccaaggctactgacgactctgct
ttgttcgatggcaacaatgcaggcgtggtttccaaacagtatgcaaagtcagccaacccg
tcacctcttaaatttgaagggctccgctctgtggatggaggtcacaaagttcaagatatt
aaggagttaatgactttgccagtcatcattactagtgacatgactaagagtccacctgtt
ttagtcgtgtatgcttgtaatccatacgcgacgtag
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