Cryptococcus deuterogattii: CNBG_2612
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Entry
CNBG_2612 CDS
T09796
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cdeu
Cryptococcus deuterogattii
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdeu03021
]
CNBG_2612
03036 Chromosome and associated proteins [BR:
cdeu03036
]
CNBG_2612
Transcription machinery [BR:
cdeu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
CNBG_2612
Chromosome and associated proteins [BR:
cdeu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
CNBG_2612
SLIK complex
CNBG_2612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHD1-like_C
Helicase_C
HTH_CHD1_Hrp3
Chromo
ResIII
HDA2-3
DEAD
Myb_DNA-binding
Cdh1_DBD_1
CHDCT2
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
88178955
NCBI-ProteinID:
XP_062882636
LinkDB
All DBs
Position
8:complement(<883027..>888673)
Genome browser
AA seq
1516 aa
AA seq
DB search
MDTYPQQHLPSSMLASDTQLDVGLPASSSVGSSQSPSSKPSSAPKITLRMPQQPESAADF
DSESESLTPGPEEIGNRQGVVEEVSDQEGAGDDESEGEGEAEQDDFNYDDEEEEDYDEDE
VMEEGDDDDDDDDPSFGERKKKIKKARAKVESDRPAKQKKSSGAFPMRKQVDESSDEDYG
TKSHKKKYFSKTGVSRRATPGTPYSDDNAFRRGAAKKVVTYNEADVDYGLESEDEAVDTG
YYYTAGAPAEAEPADEIDQVMFHWRDENHKDDPKDIPQTNLRFHIKWKDYSHIHNTDETY
AFLKNYKGFKKVENYITKVWAIDQSYRHPAPDAAWKPTQEEMEQYEIDKERIKELQESYK
VVERVLDEKEEKRKDGRVTLFFVKWTNLQYNDCTWETYEDVMECQGAKEGIEEFHQRQAR
TTVPARSINYSIDNRPVYQKIPENPPYLACGGALKPFQLTGLNWLAYVWSKGENGILADE
MGLGKTVQSVSFLSYLFHAQHQYGPFLVVVPLSTISAWQSQFKRWAPELNVICYMGSARS
RDVIRQFEFGPLKNLKFNVLLTTYEFILKDRQDLQQIKWQVLAVDEAHRLKNHESQLYDA
LKSFWSASKLLITGTPLQNNVKELLALMHFLMPEKFQLANDFDLNDASEDQGAKIKDLHD
KLTTLMLRRLKKDVVKELPTKSERILRVEMSAMQTHYYKNILTKNFAVLSKGGTQQVSLM
NVAMELKKASNHPYLFEGAEDRNKPANEILRGLVMNSGKMVCLDMLLSRLKSDGHRVLIF
SQMVRLLDIISDYMTARGYVHQRLDGTVPSDVRKKSIEHFNAPGSPDFAFLLSTRAGGLG
INLETADTVIIFDSDYNPQNDLQAMARAHRIGQQRHVSIFRLVSKGTIEEDILERAMRKM
LLEYAIINKMDTTGAHINGSSTPKDKNGDLSKEELSAILKFGARNMFKTDDNTQNKKLDE
MNLDDILNNADAFDTESAAAPGTTSLGGEGFLSQFAAIQDVKADVDNLSWDEIIPEDERS
KAEEEEKAAATAEIVAASSRKRAAAKAPGTYQDMDFDDHEGSSKPGSPNDKKPKAPGQPK
KTPAQRALELKDRDLRVLIRGIQKWGDIRSRYEPIVKEAKLENKNRVVIIQTCEDIITHG
EQAIAAHKAHIRDLQERGEPISSSLRQKAILFTYKGVVSINAETVVARYYELKALVEHFK
RVEDFPSYTIPHDSLKPTMNWTVEWTAREDSQLLVGIWKHGFGSWEAIAHDPELQLSDKI
FLEDPKAAKLDPNAPKPGVPGPVHLQRRGDYLCGIIREYEENRRILVEQQAMIASLPAKE
GFGFEHPPLPSIAGPSKKPSPSVASSSKDRDAGKGKRRKTPEYTDSEDESSYESMDEDAV
KELLRPAKKHLKKLKSGTENLSREEKIVALKECLAGIGARIDEVVAEKAAEGQNATKWRK
HCWVFASFFWPRQGVNYSKLMEIHGKMVNESAPTTSKSKAKPKRKTEDDPSKPNKKPRPS
DSQKEVKVEGSSGQQP
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atggacacataccctcaacaacaccttccttcctctatgctggcgtctgacacccagctg
gatgtcggactgcccgcttcctcatcggtcggatcatctcagagcccttcttccaaacca
tcctcagctcccaaaattaccctgcgaatgcctcagcaaccagagtctgctgctgacttt
gactctgaatccgaatcactaacgcctggtcccgaagaaattggcaacaggcagggcgtt
gtggaagaagtcagcgatcaagagggtgcaggagatgatgaaagtgaaggagaaggagaa
gccgagcaagatgactttaactatgacgacgaggaagaagaggattacgatgaagatgaa
gttatggaagaaggggatgatgatgacgacgatgacgaccctagtttcggtgagagaaag
aaaaagatcaaaaaggcgagggccaaggtcgagagcgaccgaccggcgaaacaaaaaaag
tctagcggtgctttccctatgcgcaagcaagtagacgaatcgtccgatgaagattacggg
acaaagtcgcacaagaaaaaatacttttcaaagactggtgtttcacgcagagccactcct
ggtactccatactctgacgacaacgcattcaggcgcggagctgccaagaaggtggtgact
tataatgaggccgatgtagactatggacttgagagcgaggatgaagcggtagatactggt
tattactatactgccggtgctcctgcggaagccgagccagctgacgagattgatcaagtc
atgtttcattggcgagatgaaaaccacaaggatgatcccaaggatatccctcaaaccaat
cttcgattccatatcaaatggaaagactattctcacattcacaataccgacgaaacatat
gcttttctcaaaaactacaagggtttcaaaaaggtcgaaaattacattacgaaagtatgg
gcaattgatcagagttaccgtcatcctgcacccgatgctgcttggaagcccactcaggaa
gagatggagcagtacgaaatcgacaaggaaaggatcaaggagctgcaggagagttacaag
gttgtggaacgtgttttggacgaaaaagaagagaagcgaaaagatggtcgagtgacattg
ttctttgtcaaatggacaaacctccaatataacgactgcacctgggaaacctacgaggat
gtaatggaatgccaaggtgccaaagaaggcattgaggagtttcatcagcgtcaagctcga
acgaccgtccctgcccgatcgatcaactatagcatcgacaacaggcctgtctatcaaaag
atccctgaaaaccctccttaccttgcgtgtggcggtgctttgaaacccttccagcttact
gggttgaattggttggcgtatgtatggagtaagggggagaatggtatcctcgccgatgaa
atgggtcttggtaaaaccgtccaatccgtttcttttctctcatacctcttccacgcccag
caccagtatggcccattccttgtcgtcgtccctctatcgaccatctctgcttggcaatcc
cagttcaaaaggtgggcgcctgaattgaacgttatttgttacatgggctcggctaggtct
cgtgacgttattcgacagtttgaatttggaccactgaagaacttgaagttcaatgtcctt
cttacgacatacgaatttattctcaaagacagacaggatttgcagcagatcaaatggcaa
gtcttggctgttgatgaggcgcatcgacttaagaatcacgagtctcaactttacgatgcg
ctcaagagtttctggagtgcctccaagttgttgatcaccggaaccccccttcagaacaac
gtcaaggaactcctcgcgctgatgcatttcttaatgcccgagaaattccaacttgccaac
gactttgacctcaacgatgctagtgaagaccagggagccaagatcaaggatctccacgac
aagcttaccacgctcatgttacgaaggttgaaaaaggatgtcgtcaaggagttgcctacc
aagtctgagaggatcctccgagtggaaatgtctgccatgcagacccattactacaagaat
atcctgacgaagaactttgcggtcttaagtaagggcggcactcagcaggtcagcttgatg
aatgttgcaatggagttgaaaaaggcctcgaaccacccttatctctttgaaggagcagag
gaccgcaacaaacctgccaatgagattcttcgtggtctcgtcatgaactctggcaaaatg
gtctgccttgacatgcttctttcgcgactgaaatccgatgggcaccgtgtccttatcttc
tctcaaatggttcgtttgctcgatatcatctcggattacatgacagccagaggttatgtg
catcaacgattagacggaacggtgccttctgatgtgaggaagaagtcgatcgagcatttt
aacgcccctggctctcccgattttgcatttttgttgtccaccagggccggtggtctcggt
atcaacttggaaacagctgatactgtgatcatctttgattcggactacaatccgcaaaac
gacttgcaagccatggcccgagcacatcgtattggtcagcaacgccatgtcagcattttc
agactagtatcaaagggtactattgaagaagatattctcgaacgggccatgagaaaaatg
ctcttggagtatgctattatcaacaagatggacaccactggtgcccatatcaacggtagt
tccactcccaaagacaagaacggcgatctttcgaaagaagaactctcggccatcctcaaa
tttggtgcgcgcaacatgttcaagaccgatgataacacgcagaacaagaagctcgacgag
atgaaccttgacgatatcctcaacaatgctgatgcatttgacaccgagtctgccgccgct
ccgggtacaacgtctctgggtggtgagggcttcctgtcacagtttgctgctatccaagac
gtgaaggcggatgtagacaacttgtcttgggacgagatcattcccgaggatgaacgaagc
aaggcagaggaggaagaaaaggcggctgcaacagcagagatagtcgctgcaagctctagg
aagcgagcagccgccaaggcaccaggaacgtatcaagatatggactttgacgaccacgag
ggaagcagcaaacccggttcgcccaacgacaaaaaacctaaagctccggggcaacccaag
aagacccctgcacaacgtgcactggagctgaaggaccgtgatttgcgagtgctaatccgg
ggtatccaaaagtggggtgatatccgttcgcgatacgagcctatcgtcaaggaagccaag
ttggagaacaagaatcgggttgtcatcattcagacctgcgaagatatcatcacgcacggc
gagcaagctatcgcggctcataaagcccatattcgagatcttcaggagcgtggtgaacct
ataagttcttctcttcgccaaaaggctatcttgttcacgtacaaaggcgttgtatctatc
aatgccgagactgtggtggcgagatattatgagttgaaagccctcgtagagcacttcaag
agggtggaagatttcccctcttacacaatccctcatgacagcttgaagcccacaatgaac
tggacagtggagtggacggcaagagaagactctcagttgctggttggcatctggaaacat
ggttttgggagctgggaagctatcgctcatgatcccgagcttcaactcagtgacaagatt
ttcctcgaagaccccaaggctgccaagcttgaccctaacgctcctaaaccaggtgttcca
ggtcctgtccaccttcaacggcgtggtgactacctttgcggtatcatccgagagtacgaa
gagaaccgccgtattctggtggagcagcaagctatgatcgccagcttacctgccaaagaa
ggctttggctttgagcatccacctttaccgtcaatcgctggaccttcgaagaagcctagt
ccttcagtcgcgagttctagtaaagatagggatgcaggaaagggtaagaggcggaaaact
ccagagtacacggactcagaggatgagtctagttatgagtcgatggatgaggatgcagtc
aaggagttgttgagaccagcaaagaaacatcttaaaaagcttaaatctggtaccgaaaat
ctcagtcgcgaggagaagattgttgctctcaaagaatgtctagcgggtattggtgcacgt
atcgatgaagtagtcgcagaaaaggcggcggaagggcagaatgctacgaagtggagaaag
cattgctgggtgtttgcatcattcttttggccgagacaaggtgtcaactactcgaagctt
atggaaattcacgggaagatggtgaatgagtctgccccaacgacaagtaaatccaaggca
aagccgaagcgaaaaaccgaggatgacccaagtaaaccaaacaagaagcctagaccgtcg
gatagtcaaaaggaagtcaaggttgagggctcgtctggccagcagccgtag
DBGET
integrated database retrieval system
