Entry |
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Name |
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KO |
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Organism |
cdeu Cryptococcus deuterogattii
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:cdeu00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CNBG_2645
09124 Replication and repair
03420 Nucleotide excision repair
CNBG_2645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cdeu03021]
CNBG_2645
03400 DNA repair and recombination proteins [BR:cdeu03400]
CNBG_2645
Transcription machinery [BR:cdeu03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CNBG_2645
DNA repair and recombination proteins [BR:cdeu03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CNBG_2645
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
8:complement(787872..789451)
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AA seq |
447 aa
MVLSGQATPSEAGPSKPSLTPGPSAYHESSQFRHWRFSPSTLDRIRSELNTKSVEVARRN
TELEKEAQKSLGHDIADPPPAATYLTVNDELLLLHFYCSQVSRICREGFGLPEVVESTAI
SYVKRFYLKNSVMEWHPKIIMPTCLYLAAKTTNFPISADQFVSKIPKLTSEDVLEKEFLV
AQSLSFEFWVHGADKALRGWTLDMQDQPNPPLDAIQKAIAPAFTHLSTSYLSDAEFIFTP
SQISLACLRMADKKLVESFLEGRYAAHAAAIASKSVDGAEESGTGTPIQGPAPLYGMEKA
RLLEILGQIEAIIQTAAVGLDVKKVKEVDKRLRQCTNPEKIPGTALYIKRKQETEAAEAA
AKAAKTLKAQSSAADSNVFFGGSLPLANAQSKSRVPLSPRVNLNGNQKAGGAEVEMSDTG
MGIQGESGGLAMGGKGLKDVGLPLSKD |
NT seq |
1344 nt +upstreamnt +downstreamnt
atggtcctatcaggacaagctacaccatcagaggcggggccatcgaagccctctttgact
ccaggcccttccgcgtaccacgaatcttcacagttccgtcactggcgcttttccccgtcg
acgttggatagaatacggtcggagttgaataccaaatcggtcgaagtggctaggaggaat
acggagctagagaaggaagctcaaaaatcactagggcacgacattgccgacccaccacca
gccgcaacttatcttacagtcaacgatgaacttttgcttctccacttttattgttcgcaa
gtatctaggatctgtcgggaaggctttggccttccagaggtggtagaatctacagcaatc
agctatgttaaaaggttctaccttaagaacagtgtcatggaatggcatcctaaaatcatc
atgccaacatgcctttatctagctgcgaaaaccaccaattttcccatttccgcggaccaa
ttcgtgtccaagatcccaaagctcacttcagaagatgtcttggagaaagagtttctggtc
gctcaaagcctgtccttcgagttctgggtgcatggagcggataaggctttgagaggttgg
acactggatatgcaagatcaaccgaatccgccactagatgcaattcaaaaggccatcgca
ccagcttttacacatctctccacatcctacctttcagatgccgaatttatttttacaccg
tcgcaaatatccttagcttgcttgagaatggcggacaaaaagctggttgaaagcttcttg
gaagggcggtatgctgctcatgcggctgcgatcgcttcaaagtcagtggatggggctgaa
gaaagcggaactggaacaccaatccaagggcctgcacctctatatggtatggaaaaagcc
aggctcttggagatccttggacaaattgaagccataatccagacagctgccgtcggattg
gatgtcaagaaggtgaaggaggttgataagcgattgagacaatgtacgaaccccgaaaag
atcccgggaactgccttatatatcaagcgaaaacaggagacagaggcggctgaggcagca
gctaaagcagctaaaacgctcaaggctcagtcttccgccgcggatagcaacgtgttcttc
ggtggttctcttccactggccaacgctcaaagcaaatcaagggtccctttgtccccgcga
gtcaatctcaatggcaatcagaaagctggaggggctgaagtggaaatgagcgatactggg
atgggtatccagggggaaagtggaggacttgcaatgggagggaaaggattaaaggatgtg
ggcctacctttatcaaaggattaa |