Cryptococcus deuterogattii: CNBG_2710
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Entry
CNBG_2710 CDS
T09796
Name
(RefSeq) ATP-dependent RNA helicase DBP5
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03013
Nucleocytoplasmic transport
cdeu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNBG_2710
03015 mRNA surveillance pathway
CNBG_2710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdeu03019
]
CNBG_2710
Enzymes [BR:
cdeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CNBG_2710
Messenger RNA biogenesis [BR:
cdeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CNBG_2710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Bles03
Motif
Other DBs
NCBI-GeneID:
88179043
NCBI-ProteinID:
XP_062882724
UniProt:
A0A095C8P7
LinkDB
All DBs
Position
8:complement(<609046..>611305)
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AA seq
549 aa
AA seq
DB search
MSDAQASPAPTSWADMVDEDEKQKQGQTMNNQNDGLGEAATETSAPASAPAPTSAPVSNN
NDNNGLGETTPSVPADNGWGEAGASNGGNGANNNDGWFDAPVPSSSRPPKKEASDIQLQD
DTEGLITSTFQVEVKLADLQGDPDSPLYSVQSFKQLNLHEDLMKGIIAAGFQKPSKIQEK
ALPLLLSNPPRNLIGQSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEV
VDQIGQFTQVGTFLAVPGSWSRNARIDKQILIGTPGTLVDMLMRGSRILDPRMIRVLVLD
EADELIAQQGLGEQTFRIKQLLPPNVQNVLFSATFNDDVQEFADRFAPEANKIFLRKEDI
TVDAIRQLYLECDSEDQKYEALSALYDCLVIGQSIVFCKRKVTADHIAKRLISEGHAVAS
LHGDKLSQERDAILDGFRNGETKVLITTNVIARGIDIPAVNMVVNYDVPDLGPGGSGPDI
ETYIHRIGRTGRFGRKGCSVVFTHDYRSKADVERIMNTLGKPMKRIDARSTTDIEQLEKA
LKLAMKGPA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgctcaggcctctcctgccccgacctcgtgggctgatatggttgatgaggat
gaaaaacaaaaacagggacaaactatgaacaatcagaacgacggattgggagaagctgcg
accgagaccagtgcccctgcctctgctcctgctcctacttccgctccggtcagtaacaac
aacgacaacaacggtttaggcgaaacgactcctagtgtccctgcagacaatgggtggggt
gaagctggagcttccaatggcggtaatggtgcgaacaataatgacggatggttcgatgct
cctgtaccttcgtcttctcgacctccaaagaaggaggcttccgacatccaactccaagac
gacactgaaggtctgattaccagcaccttccaggtcgaggtcaaacttgccgatcttcaa
ggtgaccccgactctcccctttactctgtccaatctttcaagcagcttaaccttcatgaa
gatctcatgaagggtattattgccgctggattccaaaagccttccaagattcaagaaaag
gctcttcctttgctcctctccaatcctccccgaaacctcatcgggcaaagtcagtctggt
actggtaagactgctgctttcaccctcaacatgttgagccgagtggaccctaccatccct
acccctcaagccatctgtatcgctccttcccgagaacttgcccgtcagattcaagaagtt
gtagaccaaatcggtcaattcacccaagtcggcactttcctcgccgtccctggctcttgg
tctcgtaatgcccgaatcgacaagcagatcctcatcggtacccccggtaccctggtggac
atgttaatgagaggctcaaggatattggaccctcggatgatcagggtgttggttcttgac
gaggctgatgaattgatcgcacaacaaggtttgggtgaacagactttcaggatcaagcag
cttcttcctcccaacgtccaaaacgtccttttctcagctacttttaacgacgacgttcaa
gagtttgcagaccgattcgcccctgaagccaacaagattttcttgaggaaggaggacatt
actgttgatgcgatcagacagctttaccttgaatgtgacagcgaggaccaaaagtacgag
gccttgtctgctctgtacgactgcttggtcattggacaaagtatcgtcttctgcaagcga
aaagttaccgccgaccatattgccaagcgtcttatttccgaaggccatgccgttgcttct
ctccacggcgacaagctctctcaagaacgtgatgctatccttgacggcttcaggaatggt
gagaccaaggttctcattactaccaacgtcattgctcgaggtatcgatattcctgctgtg
aacatggttgttaactatgacgtgcccgacttgggacctggcggaagtggtcccgatatc
gagacttacatccaccgtatcggtcgaaccggtcgattcggccgaaagggttgctctgtc
gtcttcactcacgactaccgatccaaggccgacgttgagcgaatcatgaacactctcggg
aagcctatgaagagaattgatgctaggagcacgacggatatcgagcagttggaaaaggct
ttgaagttggctatgaagggaccggcgtaa
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