KEGG   Cryptococcus deuterogattii: CNBG_2771
Entry
CNBG_2771         CDS       T09796                                 
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cdeu  Cryptococcus deuterogattii
Pathway
cdeu03030  DNA replication
cdeu03410  Base excision repair
cdeu03420  Nucleotide excision repair
cdeu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cdeu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CNBG_2771
   03410 Base excision repair
    CNBG_2771
   03420 Nucleotide excision repair
    CNBG_2771
   03430 Mismatch repair
    CNBG_2771
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cdeu03032]
    CNBG_2771
   03400 DNA repair and recombination proteins [BR:cdeu03400]
    CNBG_2771
Enzymes [BR:cdeu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CNBG_2771
    6.5.1.6  DNA ligase (ATP or NAD+)
     CNBG_2771
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     CNBG_2771
DNA replication proteins [BR:cdeu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    CNBG_2771
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     CNBG_2771
DNA repair and recombination proteins [BR:cdeu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CNBG_2771
   NER (nucleotide excision repair)
    Other NER factors
     CNBG_2771
   MMR (mismatch excision repair)
    Other MMR factors
     CNBG_2771
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase FAS_N
Other DBs
NCBI-GeneID: 88179102
NCBI-ProteinID: XP_062882783
UniProt: A0A095EHY5
LinkDB
Position
8:complement(453407..456579)
AA seq 803 aa
MSDTDSPVKANIRKKRTVILSDDEDEGLSPPVTKKQLSSPRHSHASDEEAEPPRKIAKTS
SKVAPIFAPKEKKEKPPPKASSTSPKAPTKKTEVKNKDEKPHASIFTKSIRKPEPKDDDE
VSDEVKEKRKDEEEEDEVYDELEDKQEGEAAVKLASIFTKNQKSVPVADKGWKDGEAVPY
SALVSTFEKIEATTKRLEILELLTQFLLVVAKRDTATDTKGSMLLKVVYLCINRLCPDYM
GIELGIGESLLVKAIAESTGRAMPKIKEDLKKEGDLGKVAMNSRNTQSTMFKPKPLTVPY
VFQCLTEIAKATGNASQAKKVGIIKKLLAACQGTEAKFIIRSLEGKLRIGLADKTVVVAL
AHAIVLKTIGDKKPSPEKLAIMLEQGAEIVKAVYSELPSYDLVIPALLKDGVEGLRKHCK
LTPGVPLKPMLAKPTKAITEVLDRFEGKEFTCEYKYDGERAQVHLLEDGTISVFSRNSEN
MSAKYPDLVDQIPRALKPTAKTFVIDAEAVAYDLETKKILPFQDLSRRKRKDVKAEDITV
RVHIFAFDLLYLNGESLLAKELKERRQLLQEHFQPVESEFAFAKSSDGSTSEEIQAFLEE
SVKDGCEGLMVKMLTSEASTYEPSRRSMNWLKLKKDYLSGVGDSLDLVVVGAYHGKGKRT
AVYGAFLLACYDPDSEHYQTICKIGTGFSEEILTQFYELLKPLELEVVRGDIEVGGAKPD
VWFEPRVVWEVLTADLSLSPVYAAAHGVIDSRGISLRFPRFIRIRDDKSADEATTAEQVS
EFYQRQVSAGGKKGPGADVDDFW
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgagtgacacagactctccagtgaaagctaacattaggaagaagcgaacggttatcctg
tcggatgacgaggacgaaggacttagcccacctgtgaccaaaaagcagctttcgtctccc
agacattctcatgcatctgatgaagaggcggagcccccccggaaaattgcaaaaacatca
tccaaagtggcgcctatcttcgctccaaaagagaagaaggaaaaaccaccccccaaggcc
tcatcaacttcgcctaaagcacccaccaagaagacagaagtaaagaacaaggatgaaaaa
ccgcatgcatcaatattcacaaaatcgatacgaaagcctgagcctaaggatgacgacgag
gtatccgatgaggtgaaagaaaagaggaaagatgaagaagaggaggatgaggtatatgat
gagcttgaggataagcaggaaggagaggccgctgtcaaactggcttcgatctttaccaag
aaccaaaaatctgtccccgtggctgacaagggctggaaggacggtgaagcggtcccgtat
tccgctctcgtgtcaacctttgaaaagattgaggctactactaagcggttagaaattctc
gaactcttaacccagtttttgctcgttgttgccaaaagagatacggccacggacactaaa
gggtctatgcttctcaaagtggtctatctttgtatcaacaggctatgccccgactatatg
ggtatcgagcttggtattggggaatcattattggtcaaggccattgcagagagcacaggg
cgggccatgcccaagatcaaagaagatttaaagaaggaaggagacctcggaaaggttgcc
atgaactctagaaacactcaatcaactatgttcaagcccaaaccactgacagtaccatat
gtcttccaatgtcttactgagattgcaaaggctaccgggaacgcgtctcaagcgaagaaa
gtaggcatcatcaaaaaactccttgctgcctgccagggtaccgaggcgaaattcatcata
cgatctctcgaaggaaagttacgaatcggtcttgccgacaaaacagtcgtggttgccttg
gcgcacgctatcgttctgaagacgattggtgataaaaagccctcgcctgagaaacttgct
attatgctggaacagggcgctgagattgttaaagctgtctatagtgaacttccttcatat
gacttagtaatccctgctcttcttaaagatggcgtagaaggtttgagaaagcattgtaaa
cttactccaggcgtccctctcaaacctatgcttgccaagccgacgaaagccatcacagag
gttcttgaccgttttgaaggcaaggaattcacttgcgagtacaaatatgacggagagcgt
gctcaggtccacttgttggaagatggtaccatttctgtgtttagcagaaattcagaaaac
atgagtgctaaatatcccgatctggtagaccaaataccgagggctttgaaacccactgcc
aagacgtttgtcatcgatgccgaagccgttgcttatgacttggaaaccaagaagattctg
cccttccaggatctcagtaggcgaaagcgaaaggatgtcaaagccgaagacatcacagtg
cgagtacatatctttgcgttcgatttgctctatctgaatggagagagtctccttgctaaa
gagctcaaagaaagacgacaactcttacaagagcacttccaacctgtggaatcggagttt
gcttttgctaagtcatcagatggcagcacgtcagaggagattcaggcgttcctcgaggaa
agtgtgaaggatggttgtgagggtctgatggtgaagatgctcactagtgaggcatcaacg
tatgagcccagtagaagaagtatgaattggctcaagctcaagaaagactacctttcaggt
gttggggactctctcgatcttgttgtggtaggggcatatcatggcaaaggcaaacgtaca
gcagtctatggtgctttcctccttgcatgctatgaccccgattcggagcattatcagact
atctgcaagatcggtaccggtttctccgaagaaatcctcacacaattctacgaattactt
aaacctttagaattggaagtcgtgagaggagatattgaggtcggaggagccaagccggat
gtatggtttgagcccagagtggtctgggaggtcttgacggccgatttgagtttaagtcca
gtttatgcggcggcgcatggtgtaatcgattcccgaggaatctcgctccgtttccctcga
tttatcaggatcagagacgacaaatctgccgacgaagccacaacagctgaacaggtcagc
gaattctatcaacgtcaggtttcggcaggtggcaagaaaggaccgggggcggatgtggat
gacttctggtaa

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