KEGG   Cryptococcus deuterogattii: CNBG_2850
Entry
CNBG_2850         CDS       T09796                                 
Name
(RefSeq) protein transporter SEC13
  KO
K14004  protein transport protein SEC13
Organism
cdeu  Cryptococcus deuterogattii
Pathway
cdeu03013  Nucleocytoplasmic transport
cdeu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cdeu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CNBG_2850
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    CNBG_2850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cdeu03019]
    CNBG_2850
   04131 Membrane trafficking [BR:cdeu04131]
    CNBG_2850
Messenger RNA biogenesis [BR:cdeu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CNBG_2850
Membrane trafficking [BR:cdeu04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    CNBG_2850
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    CNBG_2850
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    CNBG_2850
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_Vps41 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 88179174
NCBI-ProteinID: XP_062882855
LinkDB
Position
8:239712..241018
AA seq 332 aa
MSAQASKPVPVETQHEDMIHDAQLDYYGKRLATCSSDRTIRIFNVIKGEAKGEPVILKGH
TAAVWQVSWAHPSFGSILASCSYDGRVFIWKEVGQGQGKGSGGELQDGWERIKEHTLHTA
SVNSIAWAPYDLGPILACASSDGKVSVLSFQNDGSIEASIFPAHGTGANAISWAPSVLST
ASGVSRSQQPSNSLTPQKRFVTAGSDNLIRIWGFDEEQKKWTEEETIKGHEDWVRDVAWA
PNIGLPGMYIASASQDRTVLIHSRPSPSSPWTSTPLLPSLPQSQDPHFPDAVWRVSWSLA
GNVLAVSCGDGKVSLWKEGVGKGWECVSDFSS
NT seq 999 nt   +upstreamnt  +downstreamnt
atgtcggcccaagcatcaaaacctgttcctgtggaaactcagcatgaggacatgatccac
gatgcgcagcttgactactatggaaagcgacttgccacatgctcctctgacaggactatc
cggatctttaacgttatcaagggagaagcaaagggtgaacctgtgatccttaaaggccac
actgccgccgtctggcaagtttcgtgggcccacccttccttcgggtcaatacttgcatct
tgttcttacgacgggcgggttttcatctggaaggaagtcggacagggacaaggcaaggga
agcggtggagagttgcaagacggctgggagagaatcaaggagcacacattgcataccgcg
agcgttaactctatcgcttgggctccttatgacttgggacctattctggcttgtgcttct
agcgatggcaaggtttccgtcctcagcttccaaaatgatgggtctatagaagccagcatc
ttccctgctcacggaactggtgccaacgccatctcttgggctcccagtgtcctttctacc
gcttcaggcgtaagccgctcccaacagccatccaattctctcactcctcaaaaacgattt
gttactgccggttctgataatctcatccgaatttggggatttgatgaagagcagaagaag
tggacggaagaggagaccatcaagggtcatgaagattgggtcagggacgtcgcttgggcc
ccgaacattggattgcccgggatgtacatcgcgtcagcttctcaggaccgaaccgtgctc
atccactcccgaccatccccctcatctccctggacatccactcctcttctccccagcctt
cctcaatctcaagaccctcatttccccgatgccgtctggcgtgttagttggtcactcgcc
ggaaacgttctcgccgtcagctgtggtgatggcaaggttagtttgtggaaggagggagtt
ggaaagggatgggaatgtgtcagtgatttctcgagctag

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