Cryptococcus deuterogattii: CNBG_3066
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Entry
CNBG_3066 CDS
T09796
Name
(RefSeq) WD-repeat protein
KO
K24155
rabconnectin-3a
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
CNBG_3066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cdeu04131
]
CNBG_3066
Membrane trafficking [BR:
cdeu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
CNBG_3066
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
CNBG_3066
RAVE complex
CNBG_3066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
TPR_ELP1
Motif
Other DBs
NCBI-GeneID:
88179375
NCBI-ProteinID:
XP_062883055
LinkDB
All DBs
Position
1:complement(380117..385192)
Genome browser
AA seq
1449 aa
AA seq
DB search
MSLRLRQAIPGQPSHYSSQNTAGIVVNGAAYIVYPSASNVVLLTPEHELVETLQFWLALP
HRASSSLTGTVAGVLCSSDDGYILAWSSIYIVLWKYQPRKAKAHSDWTVHSVVIASSPVS
CMDFREGTLALGTMKSIEYWRMNPASEVVVWDRLWEQFMPVPVSVQISPTSGHLAWFNQN
QKSGYILTIDGKGQPVGVAQEIRHPREIQWIGWRNSAPGSDPFLYTITKNSVLRIYSPVL
DDPVWFQLLYSLDHRSFNRDVHATSPKTKGKEPQSSQYGAMWVWDAKVLKAGARKELEKI
KGSGEIQKMQDAVTILESMEAEESDVVAWIGPDGSITLRSILNMDRKPPTLLKSLPLAKF
ILPSVSNSSHWSPQAQLLSISSSSPSLTIILPPTSAHNRISSLYVSLAKLLSAKPQSISP
TSSSSFGEVSHIQLENNLSGFVRTPNGRGLLAMAENGEIATWYKQQLSVRPRLWHTAPKA
LLGKGHWYTTTPPSQAAMFSKGRGIVFYTNPPDAPATITLQHLDPGCSVPCTSVTLPHFS
PQDNDEIEMLLAVSNIDDGFDDRGRRTQRAIIMAATRSGEAWVWRVISRMQTSETQAEQS
DEPDEKPTIALVSHYRLPLKSVPRMIIPVDPMGWHQNVIDWETDTPLQDMVLTVSEDGDL
EFWTPKLGQHLIGKDTERGFDGEAVRHPDRACEMKENGHTHEKQGGGEDEPWVRTGIVRT
GRKNAIMARCSSRKKTVLICELEDGRHEMTIWDSKVSEFSTGLELTKVYDLGEKIQDLDW
TTTSDLQSVLAVGFPHRILLICEQRMSYVERTPGWAPFLTIDMFSYTSIPIRDSIWLAGG
SLAVGTGNQIYLFSRFLDQEDKEEDGEAEDIFQLIAQENGPLLDYHPILLGQCLLWDKAN
LVKSILLRLAKALKKCEEEGKMRLTFERLDPAEFYTTKTVTKRPKTGARKYEGLFASTPT
LEEDTHDDLTEKVVTALEERLCGPVHIPISAAETSFLATVARVTLEVDRQRRSLDISGTR
YLISIRMYVNWDRLSNTSGTVTPSSDSELRQMPKPSGASHFSFRNIVWAMHSDSQELLLE
ATSQCCKNGKMLWEDAKKLGVFLWLKSAETARSQLEVIAKNRFLADDDRDPTSCSLIFFA
LGKTKVVHGLWRQAPGHKEQKLMLKFLTNDFTLDRWKTAAMKNAYALLSKQRYEYAAAFF
MLAGQPEDGINVCLRQLNDWQLGLALARVVEGRTDGPIYRRIVSEIVLPLAFKGGHRWLG
TWAFWMLGRRDLAARVLISPMVDVANDYSPEKPIRVGNPENDDPSLLLMFQHLKSKSLQT
AKGTSEVSTKLEFDFVLHNARVFFRMGCHDLALDLLRSWSFERPFFPMDVLGESTRSSRF
ATPSVDDNGKVTTPELLDGDIKIEEPAIIIEEKEPSSSPNAEKKIGNFLKSAKQDTQQGG
MEFNMDNFF
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccgcctaagacaggccatcccaggtcagccttcccattattcctcacaaaac
actgcaggaatagtcgtcaatggtgcagcatacatcgtgtatccctcggcatcaaatgtg
gtgctccttactccggaacatgaactcgtagagactctccagttctggcttgcactaccg
catcgagcttcgtcgtctttaacaggcactgtggcgggtgtcctttgtagctctgatgat
ggatatatcctagcatggagcagcatctatattgtcctttggaagtaccagcctcgcaaa
gcaaaggcccatagcgattggacagtccattcagttgtcatagcttcttcacccgtgtca
tgcatggatttccgcgaggggacccttgcgcttggtacaatgaaaagtatagaatactgg
cgcatgaacccagcatccgaagttgtagtatgggataggctttgggagcaatttatgcct
gtgccagttagcgtccagatttctcctacttcagggcatcttgcatggttcaatcagaac
caaaagtctgggtatattcttactatcgacggaaaaggacaaccagtgggcgtcgctcaa
gaaatacggcatcccagagagatccagtggatcggatggcgtaattcagctccagggagt
gatccattcctttacacgatcacaaagaactcggtgctccgaatctactctcctgtcctt
gacgatcctgtatggttccaactactttattctctcgaccacagatctttcaatcgagat
gttcacgcaacctcgcccaaaacaaaagggaaagagccccagtcgagccaatacggcgcc
atgtgggtttgggatgcgaaagttctcaaagcaggtgcaaggaaggaactagagaagatt
aagggcagtggagagatacaaaaaatgcaagatgcagtaacgatattggagtccatggag
gccgaagaaagcgacgtcgttgcctggatcggtcctgacgggagcattacattgcggtct
attcttaacatggacaggaaacccccgactctgctcaaatccttgcccctggcaaaattt
attcttccatccgtttcaaactcatcccattggtcaccacaagctcaactactctctata
tcctcctcctcgccatctcttacaattatactccctccaacgagcgctcataaccgcata
tcatctctctatgtgtccttagcgaagctgctttccgccaaacctcaaagtatttccccg
acatcctcttcctcttttggcgaggtatcgcatattcagctcgaaaataacctgtctggt
tttgttcgtaccccgaacggtcgtggccttttggcaatggcagagaacggagagattgcg
acctggtataagcagcaactcagcgttcggcctcgactatggcataccgctcctaaagct
cttcttggtaaagggcactggtatacaacaactccacctagccaagctgcaatgttctca
aagggacgcgggattgttttctatacaaacccgcctgatgctcctgcgaccattactctt
cagcatcttgatccaggctgcagtgtaccttgcacctctgtcactttgcctcatttttct
cctcaagataatgatgagattgaaatgcttttggctgtttctaacattgatgacggtttt
gatgaccgaggtcgtcgcacccagcgagccattatcatggctgcgacaaggtccggtgaa
gcttgggtatggcgagtcatatcgaggatgcaaacttccgagacccaagcagaacagagc
gatgaacccgacgagaaaccaaccatcgcacttgtctcgcattaccgtttgccgctgaag
tctgtaccccgaatgattatccctgtagaccccatgggctggcaccaaaacgtaattgat
tgggaaactgatacgcctttgcaagacatggttctcaccgtctctgaagatggtgatctc
gaattttggacccccaaattgggacagcatctcatcggtaaagataccgagagaggattc
gatggcgaggccgtgcgccatcctgatagggcttgtgaaatgaaagaaaatggtcacacg
catgagaaacaaggaggtggggaagatgaaccgtgggtaaggacgggcatagttagaaca
gggaggaagaatgcaatcatggctaggtgtagctcgaggaaaaagacggttctgatatgc
gagttggaagatgggaggcatgagatgactatttgggactcaaaagtcagcgagttctcg
acagggctggaactaactaaggtctacgatctcggtgagaagattcaggacttagattgg
actacaacgtcggatctccagtccgtcctcgctgtcggcttcccgcaccggattctcctc
atctgcgagcagcgcatgtcctatgttgagcgaactcctggatgggcaccattcctcact
atcgacatgttttcatacacgtcaattcctatccgcgattcgatctggcttgcaggaggg
agtttagctgttggaacaggtaatcaaatatatctctttagtcgtttccttgaccaagaa
gataaagaagaagatggggaggcggaagatatattccagctgattgcgcaagagaatgga
cccttgttggactatcatcctatcctactaggacagtgccttctctgggataaagcgaat
cttgtcaaaagcattctgttgcgtttagcgaaggcattaaagaagtgtgaagaggaaggg
aagatgaggttaacgtttgaacgtttggatcctgcggagttttacaccacgaagactgtg
acaaagcgcccaaaaacgggtgcgagaaaatatgaaggtttatttgcctcgactccgact
ctggaggaggacactcatgatgatttgacagaaaaggtcgtcaccgcattggaagagaga
ttatgcggcccggtccatatacccatttctgcggctgagacatcatttttggctactgtt
gctcgagttactcttgaggtcgaccgacaaagaagatcacttgacatatccggtacgcgc
taccttatttccattcggatgtatgtcaactgggatcgcttgagtaatacatctggaact
gtcactccctccagcgattctgaattaagacagatgccaaagccaagtggagcgagccac
ttttctttcaggaatattgtctgggctatgcacagtgacagccaggagttgctgctcgag
gctactagtcaatgctgtaagaacggcaagatgctatgggaagacgcaaagaaactagga
gtgttcttatggctcaaatcagcggagactgcgaggtcgcaactcgaggttatcgcgaag
aatcgatttctggcagatgacgatcgagaccccacatcttgttctttaattttctttgct
ctgggcaaaacgaaagtcgtccatggtctctggcgtcaagcacctggccacaaggagcag
aagcttatgctaaagttcttgaccaatgactttactctcgaccgatggaagactgctgcc
atgaagaacgcctatgcgttgttgagtaaacagcgctatgagtacgcagctgcatttttc
atgctggctggacaacctgaagacggaatcaacgtttgtttaaggcagcttaatgactgg
caacttggcctggcccttgctagagtagtggaagggaggacagatgggccgatctatagg
cgaattgtaagcgaaatcgttctaccgttggcatttaaaggtggccatagatggttggga
acttgggctttctggatgttgggtaggagggatctggctgcgagggtgctcatttccccg
atggttgacgtcgcaaacgactactccccagagaaacctatacgggttggcaacccagaa
aatgatgaccccagcttgctcctgatgttccagcacctcaagtccaaatctctccaaacg
gcaaaggggaccagcgaggtttccactaagctggaattcgacttcgttctgcataatgcc
agagtcttctttcgcatgggttgccacgacctcgcccttgatctgctacgttcatggtcc
ttcgagcgccccttcttccctatggatgtattgggtgagagtacaagaagctcaaggttt
gcaacgccttccgttgatgataatggcaaagtcaccactcctgaactactggatggagat
attaagatagaagaaccggcgataattatagaagagaaggagccaagctcgtcaccgaac
gcagagaaaaagattggaaactttttgaagagcgcgaagcaggacacgcagcaaggaggg
atggagttcaacatggataacttcttttga
DBGET
integrated database retrieval system