Cryptococcus deuterogattii: CNBG_3144
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Entry
CNBG_3144 CDS
T09796
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03030
DNA replication
cdeu03410
Base excision repair
cdeu03420
Nucleotide excision repair
cdeu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CNBG_3144
03410 Base excision repair
CNBG_3144
03420 Nucleotide excision repair
CNBG_3144
03430 Mismatch repair
CNBG_3144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdeu03032
]
CNBG_3144
03400 DNA repair and recombination proteins [BR:
cdeu03400
]
CNBG_3144
DNA replication proteins [BR:
cdeu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CNBG_3144
DNA repair and recombination proteins [BR:
cdeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CNBG_3144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
nSTAND3
AAA_30
RuvB_N
AAA_16
AAA_14
AAA_5
AAA_33
AAA_28
RNA_helicase
AAA_24
Kinesin_assoc
AAA_19
AAA_18
AAA_assoc_2
Motif
Other DBs
NCBI-GeneID:
88179448
NCBI-ProteinID:
XP_062883128
LinkDB
All DBs
Position
1:complement(616152..620094)
Genome browser
AA seq
1001 aa
AA seq
DB search
MSSKADSPKKKPANKADQPAGKDIRGFFASGNPQKTGITKQVGTKSGSGKKPIMIDDSDE
EPEEVVKEQSSSKVAPPSSAPNSATSKHFGSKAIVLSSDDEPAPAGSKSIAKSAPKAASK
PIMTRKPALAKRKILNDSESEEEGYKPQPKRRSLGGRADKESDDEGAKSTKKGKRENDDD
FDPMDVEDDDEEYNFDDEDEPQQKPKPKLTAKKPLAAPKKSTPVKKPAAPKTAKTAEPEK
KEEKKFDWRAAAAARAAGPKAPGSKEIPEGTSDCLAGLTFVFTGEMESLGREDAQELVRR
YSGKVTTAPSGKTSYVVVGENAGVSKLNKVKEKKIPMINEDEFLELIRQRSGKGPGGTVD
KAAMEKASKAREKEEKKILEQAREMEEKEKKEEKERIRKQKALEGQGMAVKKTGPASAQL
WTTKYAPTSLKEICGNKAPVERLGQWLKDWQNNYKANFKKPGKDGMGVYRAVLISGPPGI
GKTTSAHLMAKEAGYTPLELNASDTRSKKLIENETNVDNKSLDGFFKGQGIGQTNAAGLK
IGSRTCLIMDEVDGMSAGDRGGVGALNTLIRKTKIPMILICNDRTLQKMKPLQSTTFNMT
FRKPQPNEIRSRIMSILHKEKLKIPPNVVDELIKGVNSDIRQVLNMLSTFKLGKSEMNFD
EGKQLVKVNEKNTIMTPFTIIDKLTGPYAFSKNSKETLNDRIELYFHDFSFVPLFMQEHY
LKTNPTALNNLDGPEKNLKHLELVSKAADSISDGDLIDRMIHGSEQHWSLLPLHAVASTV
KPAMQVYGAMRSQGGGWGSWGPAFPQWLGQNSKQNKLQRQLTDIQIRMRLRVSGSREEIR
EQYMPLLASKIVSPLIDRGAAAVEETIEYMDEYYLGKDDWDAFVELGVDTMRDEDILKKI
PSATKASFTRQYNKTDHPIAFHKGDLFAGVKKKIDVGPVPDNEDVFEEDEPVPDEPEEDK
SEEEDPLQDKLIKAVKPKGKVTAKSASKSTVTKGAKSKAMK
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgaaagcagactctcccaagaagaagcctgctaacaaggctgatcagccggcg
ggcaaggacattcgtggtttttttgcttcaggaaatccacaaaagactggcataacaaaa
caagtaggaactaaaagtggttcaggcaaaaagccgatcatgattgatgacagcgacgag
gagcctgaagaggttgtcaaggaacaatcgtcttccaaagttgcccctccatcatctgca
ccgaacagcgctacatcaaaacactttggatccaaggcaattgtactatcttcggacgat
gagcctgctcctgctggatcgaaatctattgctaaatccgcacccaaggccgcttccaag
ccaataatgacaagaaaaccggcattggcaaagcgcaaaattcttaacgactccgagtct
gaggaagagggctacaaaccgcagccgaagagacgaagtctaggaggaagagccgacaag
gagtctgatgacgaaggtgcgaagagcaccaaaaagggaaagagggagaacgacgacgat
tttgatcccatggatgtcgaggatgacgatgaggagtacaatttcgacgatgaagacgag
cctcaacaaaagcccaagccaaaattaaccgcaaagaagcctcttgccgctcccaagaag
tctacgccagtcaagaaacccgcggcacctaagactgctaagacggccgaaccagagaag
aaggaggagaagaagtttgattggcgagcggcagcagcagcgcgtgctgctggtcctaaa
gctccaggatccaaggaaatccctgagggtacctccgactgtcttgcaggcctcacattt
gtcttcacaggagagatggagagcctgggaagggaggatgcacaggagctcgttagacgg
tattctggaaaggttaccacagccccttctggaaaaacctcttatgtcgtagttggcgaa
aacgctggtgtctccaaactcaacaaggtcaaggagaagaaaatccctatgattaacgaa
gatgaattccttgaacttattcgtcaaagatctggtaaaggacctggtggaacagtagat
aaggcggctatggagaaggccagcaaggcaagggagaaggaggagaagaagatcctggag
caggctagggagatggaagagaaggaaaagaaagaggaaaaagagagaataaggaagcag
aaggctctggaaggacaaggtatggctgtcaaaaaaacgggtcctgcatcagcccagctg
tggacgaccaagtatgctcctactagtttgaaggagatctgtggcaataaagctcctgtc
gaacgcctgggtcagtggttgaaagattggcaaaataattacaaggcaaatttcaaaaaa
cccggcaaagatggcatgggcgtttatcgcgctgttctcatttctggtcctcctggtata
ggcaaaactacctccgctcatttaatggcaaaagaggccggttatactccattagaactg
aatgcgagtgatactcgaagcaaaaagctaatcgagaatgaaacaaatgtcgataacaag
agtttggatgggttcttcaagggtcaagggatcggtcagacaaatgccgcgggcttaaag
atcggctccagaacctgcttgatcatggacgaagtagatggaatgtccgccggtgacaga
ggtggtgtcggcgctctaaacacattgatcaggaagactaagatcccaatgatcttgatc
tgtaacgatcgtacgttacaaaaaatgaagcccttacagagcacgactttcaacatgacg
ttcaggaagccccagccgaatgagattcgctcaaggattatgtctatcttgcacaaggaa
aagctcaagatcccacccaacgtcgttgatgagcttataaagggagtcaattctgatatc
cgtcaggttctaaacatgctctccacgtttaagcttggtaagagtgaaatgaactttgac
gaagggaagcaattagtcaaggtcaatgagaagaacacaatcatgacgccttttactatc
atcgataaactcacaggcccatatgctttctccaaaaatagcaaagaaacattgaatgat
agaatagagctatatttccacgatttcagctttgtgcctcttttcatgcaggagcattac
ctcaaaacaaaccccactgccttaaacaacctcgacggtcccgagaagaacctcaagcac
cttgaattagtatccaaggctgcggactctatatccgacggtgatctaattgatcgcatg
attcacggttcggaacagcactggtccctgttaccgctgcatgctgtagcgtctacggta
aagcctgccatgcaagtgtatggtgcaatgaggagtcaaggtggtggatggggcagctgg
ggtcctgctttccctcaatggcttggacaaaactcgaagcagaataaacttcaaagacag
ctcacggatattcaaattcgtatgcgtttgcgagtgtcaggaagcagagaggagattaga
gagcagtacatgccgctcttggccagcaagattgtatctcctctcattgatcgcggtgct
gcggctgtagaagagacgattgagtacatggacgaatattatcttggaaaagacgattgg
gatgcgtttgtcgaacttggtgtggatacgatgcgcgatgaggacatcctgaagaaaatc
ccaagcgctacgaaggcttctttcaccagacagtacaacaagactgatcacccgatcgca
tttcataagggtgatttgtttgcgggggtaaagaagaagattgatgttggaccagtgccc
gacaatgaggatgttttcgaagaagacgagcctgtaccggatgagcctgaggaggataag
agcgaagaggaggacccgttacaggataaattgatcaaggctgtaaagccgaaaggtaaa
gtcacggccaaatctgcatcaaaatcgactgtaaccaaaggagcaaagtcaaaagctatg
aagtag
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