Cryptococcus deuterogattii: CNBG_3372
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Entry
CNBG_3372 CDS
T09796
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNBG_3372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdeu03019
]
CNBG_3372
Messenger RNA biogenesis [BR:
cdeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CNBG_3372
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CNBG_3372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
88179662
NCBI-ProteinID:
XP_062883342
UniProt:
A0A095CDE7
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Position
1:complement(1293389..1294934)
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AA seq
442 aa
AA seq
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MFYATAGQQATQQPPTSRIAGYPRSGPPGFGVRSSDPNDFPALGSHSQHNSSYIAQNQSG
QGSANASHQNTHLQQQQQLYMQQQQQQQLGVTPTPPPGISGPTAGASSQSNGGLTEEFPA
LGASSESKDGRMANFLRNPSSVHQPVPSSPSPLPNGTSSASASQSANATPSTNPPHPQSG
MGGPASTTDSWQRQSPRHTEPVVRPVQQILSSPVDRWGLKALLFEIQMHMNKTDRGMMVF
GEDLEELGVDINSEEALYPTFVTPWVEPNSLPPPQIEESFHIPQCYYVHAPPVESKLQNF
AEDTLFLAFYMSPQDVLQLRVAEELFARGWRYHTELQTWLTSPTLASIDLSKADRSSGQP
NWIRGPFAYLDTRTWVRQRTAEDFTIDANVLELTKRADDVIREESARKEAEKSPSNVPVN
GQGQAQSQGQQQNQGQTLPYQR
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgttctacgcgacagcaggccagcaagcaacccagcaaccaccaacatcaagaatcgca
ggctacccaagaagcggtcctccggggtttggcgttcggagttctgatccgaacgatttc
cctgctcttggatcacacagtcagcataattcgagctacatcgctcaaaatcaaagcggc
cagggttcagccaacgcaagccatcagaatactcacttacaacaacaacaacagctgtat
atgcaacaacaacagcagcaacaacttggcgtcacgcctactcctcctccggggatatct
ggtccaacggcgggcgcttcgtctcaatcgaatggaggtttgacagaagagtttcctgct
ctcggggcatcttcagaaagcaaagacggtcgtatggcgaactttcttcggaatccgtct
agcgtacatcaacccgtcccttcctctccttcaccattacccaacggtacaagcagtgca
agtgcatcccagtccgcaaatgcgaccccttcaaccaatccaccacatcctcagtctggg
atgggtgggcctgcatctacgactgactcatggcaaagacagtcaccaagacatacagaa
cctgtggtacgacctgtacagcagatcctgagttccccggtggatagatggggattgaag
gcgctgttatttgagatacaaatgcatatgaacaaaacggatcgcggcatgatggtgttt
ggagaagatctagaagaattgggcgtggacataaacagcgaggaggcgctctaccctaca
tttgttaccccatgggtggaacccaactcattaccgccacctcaaattgaagaatcattc
cacatccctcagtgttactacgttcatgcgcctcctgtagagtccaaattgcaaaacttc
gcagaagatactcttttccttgccttttatatgtctcctcaagacgttttgcagctccgg
gtcgcggaggaactgtttgcccgaggatggcgttatcatacagaattacaaacatggctc
acctcccctactctcgcgagcattgatctctccaaagccgatcgttctagtgggcaacca
aactggatccgtggtccatttgcatacctcgacactcgaacatgggttaggcaaagaacg
gcggaagacttcaccatcgacgccaacgtccttgaacttaccaaacgggcagatgatgtc
attcgagaggagtcagctagaaaggaggcagagaaaagccccagcaatgtcccggtgaat
ggtcaaggccaggcacaaagccaaggtcagcaacaaaatcaaggacagacgcttccgtat
cagcgatga
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