Cryptococcus deuterogattii: CNBG_3431
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Entry
CNBG_3431 CDS
T09796
Name
(RefSeq) exosome complex exonuclease RRP6
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNBG_3431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdeu03019
]
CNBG_3431
Messenger RNA biogenesis [BR:
cdeu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
CNBG_3431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
DUF6335
Motif
Other DBs
NCBI-GeneID:
88179720
NCBI-ProteinID:
XP_062883400
LinkDB
All DBs
Position
1:complement(1432274..1435517)
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AA seq
975 aa
AA seq
DB search
MSQPASGDASIPSPTQSFSEYLPFLTAALDRLTTNAASLPNKTDLDFHRSLDRRLSKDLE
KTSERLLGMTERILDLVERSQKEARQGRDKGKTAKVEIRRRKLEDQDDIIDGYRSAVQGI
VDGLLEDADINLDELRGGKGKTAITVKPALAAQAGKKIPGPFVERLPANIIHASDLTKPQ
LLFHDAPDNARTSESWKPSLTTKPHAMVPLGFKAPLDYELTSEEEMDPSKAALRREKEIR
ARTHPYYYETKHLPYPTSLFIDSKPVPPQSFDETPFEFVDTPEKFHRMVRKLKQAKEIAV
DLEHHDMRSYAGFTCLIQISTRENDWVVDTLALRKEIQQDKFGDVFTDPTIVKVFHGADS
DIIWLQRDFEIFVVNLFDTYNACVVLGVPQRSLSALLQHYCNFEADKRYQRADWRIRPLP
DGMLNYARSDTHFLLFIYDNLRNALLQKSSRPSSPAASGTIVLDSAKPNPQEAMREVLDK
SAETALKMYERDSYDIETGRGSGGWLAAGKKWLPKGEIEQESGWVWRHLHDWRDRVAREM
DESPFYVMPNNMLRDVSTADNTANLSRIIRRDRAPIAAQYIPEITSIIVAAKKKFREITT
KRAANPQIQEMEKIEAKEVGANDVEKVAVVVPAVPSVPLASTTSNIWNAAVKPTSTRANA
KSGLFGSTIKSSQLKHASGYATTPKSGQSALFGVTLNQTNNQKSASAALTLRERELSPGF
VKVMESMRMDLYPRGITSGISEGTVEKGLNPETVPFIPSNQRKTTATPSLEARGKKSFGL
TTESSHLLPSDQKASSPAAFASDMSSQKSSKSGTIDEGVVQVKKSKKQKKRERASTADGA
GDDSDSKKAKLNADGDEGFGAATPPDQAVVTTAVEPSNTVNVGEKGDVKRSTTFKKKTKV
KPEDIPAFDYASQPNLLDQPQSSSMAQIDTKKKKKKVKEARPSGAGIVEVPTFGARPARD
LSQPKQGNKSGTFGK
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagcctgcctctggtgacgcatcgataccttcacccacccaatctttctcagaa
tatctaccttttttgactgccgctctcgaccgtctcaccaccaatgccgcctctctgccc
aacaagacggatctagatttccaccgaagtctcgataggaggctcagcaaggatctagag
aagaccagcgagaggctactgggtatgactgagaggatactggatcttgtcgagagaagt
caaaaagaagccaggcagggtagggataaagggaaaacagctaaagtagagataagacgg
aggaagttggaagaccaagatgacataatagatgggtacagaagtgcagtacagggcata
gtagacggcttgcttgaagacgcggatatcaaccttgatgaattgagaggtggcaaggga
aaaacggctattacagtcaagccagccctggctgcccaagctggtaaaaaaattcccggc
ccgttcgttgaacgtctgccagcaaacatcattcatgcgtccgatcttaccaaacctcag
cttctattccatgacgcccctgacaatgctcggacatctgaatcctggaagccgtcttta
acaaccaagccacatgctatggtccctttgggattcaaggcacctctcgattatgagctg
acctcggaagaagagatggacccatcaaaggcagctctaaggcgcgagaaagagattcgc
gcccgaacacatccatattattacgaaactaaacatttaccatatcccacctcattgttt
attgattcaaaacctgtaccccctcagagcttcgatgagacgcctttcgagtttgtcgat
acgccggagaaatttcaccgaatggtcagaaaactcaagcaggcaaaagaaatcgccgtt
gatctggagcatcacgacatgcgaagctatgcaggtttcacttgcttgatccaaatttcg
actagagaaaacgattgggtcgtagatacactggcgcttaggaaggaaatccagcaagat
aagtttggagacgttttcaccgaccccactattgtcaaggtctttcacggtgccgatagt
gacattatctggctccaacgggatttcgaaatctttgtcgtcaatttgtttgatacatat
aatgcctgtgtcgtcctcggagtgccacagcgatctctctcagcccttcttcagcactat
tgtaactttgaggccgacaaaagataccagcgggccgattggcgaattcgtcccttacca
gatggcatgttgaattatgctcgatctgacactcatttcctccttttcatctacgataat
cttcgcaacgcccttcttcagaagtcttctcgtccttcttcgccagctgccagtggtact
atcgtcctggatagtgccaagcctaatcctcaagaagctatgcgtgaagtccttgacaag
tctgctgagacggccttgaaaatgtatgagagagattcgtatgatatagagacgggacga
ggttccggaggttggctggctgcaggaaaaaagtggctacccaaaggagagatcgagcaa
gagtccggctgggtttggaggcatttgcatgattggcgagatcgggtggcaagagagatg
gacgaaagccctttctatgttatgcccaacaatatgttacgagatgtcagtacggctgat
aatactgccaatcttagtcgtataatcagacgagatcgagctcctattgcggctcaatac
attcctgaaatcacatctatcattgttgccgcgaagaaaaaattcagggaaatcacgact
aagcgagccgctaatcctcaaattcaggagatggagaagatagaagcgaaggaagttgga
gcgaacgatgtggagaaggttgcggttgtagtaccggccgttccatctgtacccctagca
agcactacttcaaatatatggaacgctgcggtcaaacctacctctactagagcaaatgcc
aaatcaggtcttttcggctctaccatcaaatcttctcaactcaagcatgcttcgggttat
gctaccactccaaagtcagggcagtcagctttgttcggtgtgacactgaaccaaacaaac
aatcagaaatcggcatctgctgctttgaccctccgtgagagggaattgtcccccggtttc
gttaaagtgatggagtctatgcgcatggacttgtatcccaggggtataacatcgggaatc
agtgaaggcactgtggaaaagggactgaatcctgaaaccgttccatttatcccttccaac
caaagaaaaacgactgcgacaccatccttggaagcaagagggaagaaatcttttggtttg
acaacggagtcgtcacacctactgccatccgatcagaaggccagctcccccgctgctttt
gcatcagatatgtcttctcaaaagtcatcaaaatctggaacaatcgatgagggcgttgtg
caggtgaaaaaatcgaaaaaacaaaagaaaagggagcgagcttctaccgccgatggagcc
ggtgatgacagcgatagtaaaaaggccaagttgaacgctgatggcgatgaagggttcggt
gctgccacgccgccagatcaggctgtggtaacaacagctgttgagccttcgaacacagta
aatgttggagagaagggcgacgtcaagagaagtacgacttttaagaagaagacgaaggtg
aagcccgaagatataccggcatttgattacgccagtcaacctaatttgttggatcaacca
cagtcttcttcgatggcccagattgatacaaagaagaagaaaaagaaggtcaaagaagca
aggccttcaggagctgggattgttgaggtaccaacatttggggcaagacctgcgagggac
ttgagtcaacctaagcaaggtaataagtctgggacatttggtaaatag
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