Cryptococcus deuterogattii: CNBG_3545
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Entry
CNBG_3545 CDS
T09796
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03013
Nucleocytoplasmic transport
cdeu03015
mRNA surveillance pathway
cdeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNBG_3545
09122 Translation
03013 Nucleocytoplasmic transport
CNBG_3545
03015 mRNA surveillance pathway
CNBG_3545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdeu03019
]
CNBG_3545
03041 Spliceosome [BR:
cdeu03041
]
CNBG_3545
Messenger RNA biogenesis [BR:
cdeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CNBG_3545
Spliceosome [BR:
cdeu03041
]
Complex C
Other components
EJC/TREX
CNBG_3545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_3
RRM_occluded
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
88179825
NCBI-ProteinID:
XP_062883505
UniProt:
A0A095CBG7
LinkDB
All DBs
Position
1:complement(1722387..1723019)
Genome browser
AA seq
123 aa
AA seq
DB search
MADVEMNGKSKDLSWAAKSVEGWNIFVTGLHEEATEEDVQDFFADFGSIKQVNMPLNRRT
GYVMGYAIIEYNDRENAERAIAEADGTTFLEQTIHVTFAFAKAPQGGAQRKEGKGRELSP
DRR
NT seq
372 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgttgaaatgaacggcaagagcaaggacctttcttgggccgccaagtctgtc
gaaggatggaatatctttgtcactggactccatgaagaagctaccgaggaggacgttcaa
gatttctttgcggactttggatctataaagcaggtcaacatgccattgaacagacggacg
ggttacgttatgggctatgcaatcattgaatataatgaccgagaaaatgcggagagggca
attgcggaggccgatggcaccactttccttgaacaaacaattcacgtcacttttgcattc
gccaaggctcctcaaggaggtgctcaacggaaagaaggcaaaggacgagagttgtcacca
gacaggagataa
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