Cryptococcus deuterogattii: CNBG_3547
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Entry
CNBG_3547 CDS
T09796
Name
(RefSeq) uncharacterized protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03018
RNA degradation
cdeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNBG_3547
09123 Folding, sorting and degradation
03018 RNA degradation
CNBG_3547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdeu03019
]
CNBG_3547
03041 Spliceosome [BR:
cdeu03041
]
CNBG_3547
Messenger RNA biogenesis [BR:
cdeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CNBG_3547
mRNA degradation factors
5'-3' decay
Lsm complex
CNBG_3547
Spliceosome [BR:
cdeu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
CNBG_3547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
88179827
NCBI-ProteinID:
XP_062883507
LinkDB
All DBs
Position
1:complement(1729881..1730684)
Genome browser
AA seq
147 aa
AA seq
DB search
MLPLSLLTAAQGKPMLVELKNGVTFNGHLVECDTFMNVTLREVYQTSADGERFWKMKEMF
IKGNIIKYFRIADDILEQAAAEQDKARAANRARGGTRGGRGGPGGARGGRGGPPGRGGPP
GRGGGPGRGGFNQRGRGGPPRGGAPRP
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctctctcacttcttacagccgctcaaggcaagccaatgcttgtggagctgaag
aatggagtcaccttcaacggccatctagtcgaatgcgacactttcatgaacgttactctt
cgagaggtttaccaaacttcagcggacggcgagcgattctggaaaatgaaggagatgttt
atcaagggtaacattattaagtacttccgtatagcagacgatattttggaacaagcagct
gcggaacaggacaaggcgcgagcagcgaacagagcgcgaggtggaactagaggtggacgg
ggtggaccaggaggtgctcgaggaggtcgaggtggaccacctgggcgaggagggcccccc
ggtcgagggggtggaccgggacgtggcggattcaaccaaagaggtagaggaggaccacct
agaggcggagcgccgcgaccataa
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