Cryptococcus deuterogattii: CNBG_3614
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Entry
CNBG_3614 CDS
T09796
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
cdeu
Cryptococcus deuterogattii
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdeu03016
]
CNBG_3614
Enzymes [BR:
cdeu01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
CNBG_3614
Transfer RNA biogenesis [BR:
cdeu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
CNBG_3614
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Nop25
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
88179887
NCBI-ProteinID:
XP_062883567
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All DBs
Position
1:complement(<1914457..>1916465)
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AA seq
531 aa
AA seq
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MAQQQPQSKLPPRARYAANNRKYGTPLPILFPSSSSSSTSSKSILTSFLPSLSSTRVEIQ
HITGEYDPITGSVWITDPRMMDLAFQKGFFGKGSLSRSEPSWRARRVGLLKGGDNLAAEQ
MREKRRLERKQFKIDRAQAMLDAAKKAEAIIAAAKSQPESQNQSQLQPGDNDGDDVEEDG
EGEGEGDEADVSLVVTPDIEVDLEREVETQSQIPAGGDTLANQSQMEIDPLNLTPQTFLV
RPTRPDANRNRGRNAFRRRPPQSQAQGNTYTAMATPARASAPAAEQPTQTPADADIEADE
DLFDESLVEEMEHLQLSIEESLFLSLAIGVLHVYDPSTGIYLTPTSNSADSGELLKLLLP
SPSPSSPLSTQLSISESKGVLLPDNPALVSYAVYHHFRSLGWVVKDGIKFCVDWLLYRRG
PVFSHSAFACVIIPVYANPHDRVVSPYGGEDWYEERMSWKWMNTIIRVNALVQKNVIAVY
ITIPPLSSFPPSMKLADGTLDPKKNGLKSLLKQYTIREVALTRFGATRRRD
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcagcaaccacaatcgaagctcccgccaagggccagatacgcggcgaataac
cgtaaatatggcacgcctctgcccatccttttcccctcctcttcctcctcttctacatct
tccaaatccattctcacatctttccttccgtccctatcctctactagagttgaaattcag
catatcacaggcgaatatgaccctattacaggaagcgtctggataacagaccctcgaatg
atggatttggcttttcaaaaaggtttctttggaaaaggtagtctgagtaggagtgagcca
agttggcgagcgaggagggttgggctattaaaaggtggtgataatctagcggcagaacag
atgcgcgagaagagacgattagagcgaaagcaattcaagattgatagagcgcaagcaatg
ttggatgctgccaaaaaggcagaagccatcatagccgctgcgaaatcccaacccgagtct
caaaaccagtctcagcttcaacctggcgataacgacggggacgatgtagaggaagacggt
gaaggtgaaggagaaggcgacgaagcagacgtctcgctcgtggtcactcctgatattgag
gtcgacttggagagagaagtggaaacacaatcacaaataccagccgggggagacacattg
gccaaccagagtcaaatggagattgatccgctcaacttgacaccacagacgttccttgtt
cgaccgacaaggccagatgcgaatcggaatagagggaggaatgcttttcgccgacgaccc
cctcaatctcaggctcagggtaatacttatacggctatggccactcccgcccgtgctagt
gcacccgcagccgagcaacccactcaaactcccgcggacgcagacattgaagccgatgag
gacctatttgacgaatctcttgttgaagagatggaacatctccaactttctattgaagaa
tctctctttctctccctcgccatcggggtgcttcatgtgtacgacccttccactggcata
tacctcaccccgacctcgaactctgcggattcgggcgagctgttgaaattactcctccct
agcccctcaccgtcttcacctctttctacccaattgtctatctctgagagtaaaggagtg
ttattgcctgataaccctgcgctagttagttatgcggtgtaccaccatttcagaagtctg
ggctgggttgtgaaggatggcatcaagttttgcgtagattggcttttgtaccgccgagga
ccggtgttttcccattctgcctttgcatgcgttatcatcccagtatatgctaatccacat
gaccgagtggtctcgccgtatggaggggaggattggtatgaagaacggatgagttggaag
tggatgaacaccatcatcagggtgaacgcgctcgtacaaaaaaacgtcatcgcagtttac
atcaccatacctcctctttcttccttccctcctagcatgaagttagcggacggcaccctt
gatccaaagaagaatggtctcaagagtctgttaaagcagtataccatccgagaagtagcg
cttacgaggtttggagccacaagacgacgtgattag
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