Cryptococcus deuterogattii: CNBG_3781
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Entry
CNBG_3781 CDS
T09796
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
cdeu
Cryptococcus deuterogattii
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdeu03016
]
CNBG_3781
Enzymes [BR:
cdeu01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
CNBG_3781
Transfer RNA biogenesis [BR:
cdeu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
CNBG_3781
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
88180038
NCBI-ProteinID:
XP_062883981
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All DBs
Position
11:complement(543950..545074)
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AA seq
353 aa
AA seq
DB search
MSSPHSIPLYLVNGVATVWDAQSIIPILSDSILKLTTLPTAAATLHCVHNISGLRAGTLP
GVAQQNGFLGLPLTLMQEETAYLVTQGIAHLVPLDPTPSPPSAETIKAHTAARVARLKAL
EERTREAETKRQEESKKAFDKGGEKARLKREARARAKAEKAKADGEGLFAEDDKGNIITA
ASAAASSPAKTKVKTKETGGAPAPGHFHIVPSHPVLSQHPCGSSESQPQSITSVPHPLFP
FPTTPRQRALLGVFATLQSLSYRVGLGPRFGGEWLIYPGDYLRYHAHFTSQVIVRDEPIK
PTEIVAWGRLGTGTKKAGLICCWDDGKRQDGQDNQEEKEEDVEFYSLEWANFG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctccccactccattcccctgtacctcgtaaacggcgtcgccactgtctgggat
gcacaaagtatcattcccatcctctccgactctatactgaagctgacaaccttacccaca
gctgctgcgacactccattgtgtgcacaatatctctggtttaagagcgggcacactgcct
ggcgtagcccagcaaaatggattcttgggactgcccctcacactgatgcaagaagaaacg
gcataccttgttacccaaggcattgcccatctcgttccccttgatcccaccccatctcca
ccttccgccgaaactattaaagcccatacggcagcgcgtgtcgcgcgtctgaaagcgttg
gaggaaagaacaagagaggcggaaaccaagaggcaggaagagtccaaaaaagctttcgat
aaaggcggagaaaaagcgaggctgaaacgggaggcgagggcgagagcgaaagcagaaaag
gctaaagcagatggggaaggactgtttgcggaggatgacaaggggaatatcatcactgcc
gcttccgccgcggcttcttcaccggcaaagaccaaggtaaagaccaaggagactggcggt
gcacctgctcctggccactttcacattgttccctcgcatccagtattgtctcaacatcca
tgcggatcatctgagtcacaaccacaatctataacatccgtcccccaccctctcttcccc
tttccaacaacccctcgccaacgtgctctcctcggcgtgttcgccacgcttcaatcactc
tcataccgagtcggacttggtccccgatttggtggagaatggttaatttatccaggagat
tacctgcggtatcatgcacatttcaccagccaggtcatcgttcgagatgaacctatcaaa
ccgacagagattgtggcgtggggtaggttgggtacagggacgaaaaaagcaggattgata
tgttgctgggatgatggaaaaagacaagacggacaggacaaccaagaggaaaaggaagag
gatgtagaattttactcgcttgaatgggccaactttggatag
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