Cryptococcus deuterogattii: CNBG_3873
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Entry
CNBG_3873 CDS
T09796
Name
(RefSeq) histone deacetylase 6/10
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
cdeu
Cryptococcus deuterogattii
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cdeu01009
]
CNBG_3873
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdeu03019
]
CNBG_3873
04131 Membrane trafficking [BR:
cdeu04131
]
CNBG_3873
03036 Chromosome and associated proteins [BR:
cdeu03036
]
CNBG_3873
Enzymes [BR:
cdeu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CNBG_3873
Protein phosphatases and associated proteins [BR:
cdeu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CNBG_3873
Messenger RNA biogenesis [BR:
cdeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
CNBG_3873
Membrane trafficking [BR:
cdeu04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CNBG_3873
Chromosome and associated proteins [BR:
cdeu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
CNBG_3873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2-like
Arb2
DUF1749
Ser_hydrolase
Motif
Other DBs
NCBI-GeneID:
88180122
NCBI-ProteinID:
XP_062884065
LinkDB
All DBs
Position
11:complement(280115..283217)
Genome browser
AA seq
728 aa
AA seq
DB search
MDIDTPPIASTSAQQLTSVHTPTHTTPVTTMSMPGTAARIARTGYIYDPLMMLHCMEGYM
PTAENVIDNGDGHPEDPMRIKRIFTRLAEQGLIRRMKRLDFEEVTFEQVLLVHGEEMWDK
VQATELLTDQQIQDTKEYYDQLSLYVCRETAHCARLSAGGVIQACRSVCKNEVRNAFAIV
RPPGHHAEPNEHMGFCFFNNVAVATREMQKEGLAKKVLILDWDVHHGNGTQRAFWHDGDV
LYMSLHRHEGGTFYPNGDFGSLNMVGDGEGVGKSVNIPWPGPGFGDADYIYAFQRIIMPI
AYEFNPDLVIISAGFDAADGDMLGQCHVTPAAYGHMTHMLSSLAGGKLVVALEGGYNLRA
ISDSALAVARVLLGEIPPELGILRASQAATEVVYQVALEQSKYWECIDVKACEPPEVTEL
ENGTSPVYTIPDLLKIHRAHHMFTKHQLYQIPLASQELEAAFGGQIICNENMYEVGEKGV
LVVFVHDFGNLRVENDGARSTNIHLANSYLLDTSDAVVSWVKTKGYNIIDVNILKQLPTE
YPEGPKMIVKQANDMESKLMKYIWDNYIELSECEKVVFIGHGTGCQAIMDLVNARDVEFK
VKAVVQVAGLHSLVRPNPSNKEKLSWFKQCNQIYVPAEHVVLGDEKVKRRLGDAVFTSQK
AKVVDVLNDALPRIKAFVESKIEDGLPPRAHSGSDGLYGLGGGELVAVNGHVHVDDVANT
RTEAEVTI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggacattgatacaccacccatcgcctcgacctcggcgcaacaactcacctccgtacat
acacctacacacactacccctgttactaccatgtccatgccaggaacagcagcgcggata
gcccgtacgggctacatttacgatccactcatgatgttgcattgcatggaaggttacatg
cctactgcagagaatgtgatagataatggtgatggacatccagaagatcctatgaggatc
aagaggatctttacgaggttggccgagcaaggattgatcaggagaatgaagagattggat
tttgaagaggtcacgtttgagcaagtgttgttggtgcatggcgaggagatgtgggataaa
gtgcaagctacagagctgttgaccgaccagcaaattcaagatacgaaagagtactacgat
cagctatccctctacgtctgccgtgaaaccgcccattgtgctcgtctttctgcgggaggt
gtcattcaagcatgtcgatcagtctgcaagaatgaagtgcgtaacgcctttgctatcgta
cgtcctccgggccaccatgcagaacccaacgaacatatgggtttctgtttcttcaacaat
gttgcggtggctaccagggagatgcagaaggaagggttggccaaaaaggtgttgattttg
gattgggatgttcaccatggtaacggtacacaaagagcgttttggcatgatggtgatgta
ctttacatgtcattacatagacatgaaggaggtacattctaccccaacggtgatttcgga
tctctcaacatggtcggtgatggtgaaggtgtcggcaagtctgtcaatatcccttggcct
ggaccaggtttcggtgatgccgattacatttatgcattccagcggatcatcatgccaata
gcatacgagtttaatcccgacctcgtcatcatttctgccggattcgatgctgctgacgga
gacatgctcggtcaatgccatgtcacgcctgcagcttacgggcatatgacacatatgctc
agttcattggctggtggcaagcttgtcgtcgcccttgagggtggatacaatctccgagcc
atctctgattctgctctcgccgtcgcccgtgtcctcctgggtgagatcccacccgagcta
ggtatcttgcgagcatcccaagccgctaccgaggtggtctaccaggtcgcgcttgaacag
agcaaatactgggagtgcatcgatgtaaaggcttgtgaaccgcctgaagttaccgagctt
gaaaatggcacttctcctgtatatacaatcccggacctacttaaaattcatcgcgcgcat
cacatgttcaccaaacaccagttgtatcaaataccattggctagccaagaattggaagct
gcattcggtggtcaaatcatctgcaatgaaaatatgtatgaagttggagaaaagggggta
ttggtagtatttgtccatgacttcggtaacttgagagttgagaatgacggcgcgagatcg
accaatatccatctggcgaacagctaccttctcgatacgagtgatgcggttgtatcgtgg
gttaaaacaaaaggctacaacattatcgatgtcaatatcctaaaacagttacctaccgaa
tatcccgaaggccccaagatgatcgtgaaacaagccaacgacatggaatccaaattaatg
aaatatatctgggacaattacattgagctgtccgaatgcgaaaaagtagtgttcataggg
catggtacaggctgtcaagcgattatggatcttgtcaatgctagagacgtagagttcaag
gtgaaggctgtggtgcaagtggccgggttgcattccttggtcagaccgaatccgtcaaat
aaggaaaagttgagctggttcaagcagtgtaatcaaatctacgtgcctgccgagcatgtg
gtattgggggatgaaaaggtcaaacggagattaggcgacgcagtgtttacttctcaaaaa
gctaaagtagtcgacgtccttaacgatgcccttccacgaatcaaggcctttgtcgaatcc
aagattgaagatggccttccaccgcgggcgcattcgggttcagacgggttgtacggtttg
ggaggtggagagttggtggccgttaatggacatgtgcatgtggatgatgtggcgaacaca
cgaacagaggcggaagtcaccatataa
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integrated database retrieval system
