Cryptococcus deuterogattii: CNBG_3905
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Entry
CNBG_3905 CDS
T09796
Name
(RefSeq) DNA helicase II/ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03420
Nucleotide excision repair
cdeu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CNBG_3905
03430 Mismatch repair
CNBG_3905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdeu03400
]
CNBG_3905
Enzymes [BR:
cdeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CNBG_3905
DNA repair and recombination proteins [BR:
cdeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CNBG_3905
MMR (mismatch excision repair)
Other MMR factors
CNBG_3905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
AAA_19
AAA_12
Viral_helicase1
ADDB_N
Motif
Other DBs
NCBI-GeneID:
88180150
NCBI-ProteinID:
XP_062884093
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All DBs
Position
11:complement(<189888..>193539)
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AA seq
902 aa
AA seq
DB search
MSLKEGVVLSEISKAKAKGEPPEAMAIRAAQNRNASTNTLAVIADLYEEYQLALTEANSL
DFDDLLLYALRLFKEAPRVVEDIRHILVDEFQDTNITQYELLKRFAKAHKGVSVVGDPDQ
AIYGWRSAEIENLNKMTKDFPGVEAIYLEENYRSTGSILDAAHAIVSQDRQRIQKSLFTS
HPKSTPVTLKVFSAPVIEGSFISTEIKRLIAYSGGLLGYNDFAILLRYNALSRVIESSLQ
KDSIPNRIVGGHKFFERMEIKDLLAYLQLADNPGFNPAFIRVVNVPKRSIGDKTLTDILS
TAKSMKISPMELCERVTDGEAIPTNIKPGVKKSLANFVGVVRKLRRAAERGASVADLIKM
IIEKVNYEEYLRTSQPDWDSRWENVKELISYSVTVAEEQARLSESQSGSTLEERGFMPAN
SAAVEALVNEAYEKGKGKEVKQERNLKKEKEGKRAYPMFRRRTSGNNISDQECDTSSATS
RSRSGSITVNTKSILPRKGSVRTNETHGGVIELLSSDDEDQGVKPDIKPKKKVADMVKQS
SVAYASPDLVESLVNAPDNLTPLAYFLQTSMLSTDTESGQDDASTPKVTITTVHAAKGLE
WPVVFIPAVEQGTYPSYRCTEPHEIAEERRLLYVAMTRAQSFLIMSYCQFRMMGGEENNK
EASEFLGDVMRNQPGLLATDQPNVDMIVRKQISAMLCRPAPDEEMTKDMIMKHVRIAPPL
STWDSPESSSWRSKSNRFARRDISKATRAAEYWASDVDEYALPSDSFAPSPSSPYTTGFT
RITSGLSRPPTTLPIAPQKKPPPPPVKSANRYIPPTMPFTFNTKEEKKEETSLDSLMSGG
NKSLEMMAGLGLPADLPPNPVGPSASAGGGLVGRGSLELARGKRRLGMGRPAPWGSKKPR
EN
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcaaagaaggagtggttttatcagaaatatccaaagccaaagcaaagggagaa
ccacccgaagccatggcaatacgcgccgcacaaaataggaatgcttccacaaatacgctt
gctgtcatcgcagatctatacgaagagtatcaactcgccctgacagaggctaattcgttg
gactttgatgacttgctgctgtatgccctgcgactattcaaggaagcacctagagtggta
gaggatatccggcatattctggttgacgagtttcaggataccaacataacccaatacgag
ctcttgaaacgctttgccaaagctcataagggcgtgagcgtcgttggagatccggaccag
gcaatttacggctggcgttctgcagagattgagaacttgaataagatgaccaaggacttc
cccggtgtagaagcgatctacttggaagaaaactacaggtccaccgggtccatccttgat
gctgctcacgccattgtttcccaagaccgccagcgaatacaaaagagtctttttacatcc
caccccaaaagcactcccgttacacttaaggtctttagtgcccccgtcatcgaagggagc
ttcatttccactgagatcaagcgcctcatcgcatattcaggtggtctactgggatacaat
gattttgccatcctcttacgttacaacgccttgtctcgagttatagaatcttcccttcaa
aaggacagtattcccaaccgcattgttggaggacacaagttctttgaacgaatggagatc
aaggatttgttggcgtatttgcagctggctgataacccaggcttcaaccctgcatttata
cgagttgtcaatgttcctaaacgctccatcggtgacaagaccctcacagatatcctgagc
acagcgaaatcaatgaaaatatcccctatggagctatgcgagcgggtcacagatggtgaa
gctattcctacaaacatcaagccgggtgtgaaaaagagtcttgcaaactttgtcggcgtg
gtcagaaaacttcgacgggccgcggaacgtggcgcatctgtagccgacctgatcaagatg
atcatcgagaaagtcaattacgaagagtatctccgtacttcgcaaccagattgggactcc
agatgggaaaacgtcaaggaactaatatcatacagtgtcacagtcgccgaagagcaagct
cgtttatctgaatcccaatccggaagtacccttgaagaaagaggattcatgcccgccaat
tctgctgctgtcgaagccttggtgaatgaggcgtacgaaaagggtaaaggaaaagaggtc
aagcaggagagaaatttgaagaaggagaaagaaggaaaacgggcataccctatgttcagg
cgccgaacaagcggcaataatatcagtgatcaggaatgtgatacgtcctccgcgacgagt
cggagtaggagtggttcgatcactgtgaataccaaaagcatactgccgagaaagggatct
gtgaggacgaatgagacgcatggtggcgtgatagagttgctttcgagtgatgacgaagat
caaggcgtcaagccagatataaagccgaagaagaaagtcgccgatatggtcaagcagagc
agcgtggcctatgcctctcctgacttggtagaatcactggtcaatgcacctgataacttg
acgcccttggcgtactttcttcaaacttctatgttatcgacggatactgaatcaggacaa
gacgatgcgtctacacccaaagtcacgatcacgactgtccatgccgcaaaaggtctcgaa
tggcctgtggtcttcatacctgctgtcgagcaaggaacctacccttcttatcgctgcacg
gagcctcatgaaatagcagaagaacgacggttactctacgtcgctatgactcgagcgcaa
agtttcttgataatgtcatattgtcagttcagaatgatgggtggagaagaaaacaacaag
gaagctagcgagtttttgggggacgttatgcggaatcagccgggtttactggcgaccgat
caacctaacgtggatatgatcgtgagaaagcagatatctgccatgctatgtcgacctgcg
cccgatgaggagatgacgaaggacatgataatgaagcatgttcgtatagcccctcctctg
agtacttgggattcacccgagagttcttcttggagaagcaagagtaatagatttgctcgt
cgagatatcagcaaagctactcgtgccgctgaatattgggcatcagatgttgatgagtac
gcccttccgtccgattcattcgctccctctccgtcttctccatacacaaccggttttact
cggatcacctctggcctttccagacctccaaccacgttaccgatagcgccccaaaagaaa
cctccccccccccctgtaaaatctgccaacagatatataccacctacgatgccattcaca
tttaatacaaaggaggaaaagaaagaggaaacatcattagactcattgatgagtgggggt
aataagagtttagagatgatggctgggctaggtttgcccgccgatctacctcctaatcct
gtcgggccctctgctagcgcgggaggaggactggtagggagaggatcgcttgagcttgct
agaggaaagaggagattggggatggggaggccagccccatggggaagcaaaaagccgcga
gagaattag
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