Cryptococcus deuterogattii: CNBG_4139
Help
Entry
CNBG_4139 CDS
T09796
Name
(RefSeq) rRNA biogenesis protein RRP5
KO
K14792
rRNA biogenesis protein RRP5
Organism
cdeu
Cryptococcus deuterogattii
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cdeu03009
]
CNBG_4139
Ribosome biogenesis [BR:
cdeu03009
]
Eukaryotic type
90S particles
Other 90S particles
CNBG_4139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
Suf
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
TPR_19
ARM_TT21
TPR_17
NRDE-2
TPR_6
RPN7
Ribosomal_L17
SesA
Motif
Other DBs
NCBI-GeneID:
88180373
NCBI-ProteinID:
XP_062883825
UniProt:
A0A095CCN5
LinkDB
All DBs
Position
6:1007705..1012521
Genome browser
AA seq
1486 aa
AA seq
DB search
MAQKKGSQLSNDKATKKTQKESLSGAPRPAPAFTSTLQSDETDFPRGGGSTLTAFEFKQV
REEGRREAENEAKLQVSKGEKRKRQMSDRQAKRLKKNEDAKKKEERDKDNIRVEILNYKR
LVPGTHVLARVHTVLPLHLILSLPNNLLAHVPITEVSNTLTKLLTAEEAMAVEEDEESDD
ESTAPDLAQLFVPGQYVPAKVLTLYPTASQSFISQYPVTETTRLASRVELTLIPQKVNSE
VAKKDLETGYFLVGEVRSEEDKGWIIGVGLNTEDGSSVEGFVSKDEVAKFVPAQALIPGQ
LFPATISSIAAGGRVVHLSLNQQDIARSQISEVSTVGSIIPGHSVNALITAVVPSGLNVK
IAGFFDGTIDLAHLPLGEDDIEEKYKIGKKIRARVIYDNLAANPHSFALSALPHVLNLTS
PTQEGDDTPLELAIPIGKVYQSVKVTRVLNDWGVMVRTQDGLEGFVHISHLADERIPVLS
NATPQFKVGTLHRARVIGHSPMDGVLLLSFEQSVLSQLFMQVSELKVGQQLRGTIRRLTD
KMLFVNVHGNVDGIVHPTHYADIRLKHPQKRFKPEASVKARVLYVEPARNRVVLTLKKTF
LESDLAVPQSFEDLKVGEVTLGSVLKIVDKGVIVELFAGLKAFMPHSECSQTHIKDLSEA
FYVGKPLTVRVITLDPSTSRIVVSVKQAAPTAPATAAEKLEVGEAVSGTVSQVHTEQVVV
KLEGSGLTALLSLSNLSNQRHTGIEELRRSLKQGEKIDDLVVVSKNPVSGLIIVNIKKTI
AAKKEKAKKEDKAPSGISANVKAIDAIEVGQIVTGTVQEQTSQGYMVQLPNNLRGRVHPC
DSSDDLVLAAGRGPLRVGEEVKCYVLAVNKSKRAIDLSTRLSRVEGKEDVVDREINTVDD
LKQGESVRGLVKNIAGHGVFVSLGRNVTARIMIKELFDEYVKDWESRFEINQLVSGKILS
INPKSNSIEMTLRKNPSKSAKKTALLSLSDFEEGQKVVAVVRKVEAYGMFLKIEGSNVSG
LCHKSEVTDNRKADVAQALKGFREGDQVKAKIVSIDTEKGKISFGIKASYFGEDFEGGEK
SEEEDDDAEEENDEELSEGDQEMESGDEGSGEGEEDEDEDEDEEVRAVEEEDEEDSSDEE
EIAPQNSKPAPKTALNLGAGFDWTGEVPAAAPESDDESDSDEEVTAPAKSKGKSKAVDLT
ATAPSSRPSSTAEYERALLASPNSSFLWIQYMSFHLQLHEIEKARKIGRQALEKISYREE
EEKLNVWMALINLEIAFGTVSATEKLFEEATQYNDKRTVYMRYAEALQVAGKDEALEELF
KKIVKKFSAYPESWTRFAEFYLNKGDVEAARALLPRSMKSLDRSKHVETIEKMALLEFKH
GDTERGKTLFEGLIDKFPKRLDLWGVYIDQVAKVGDIQGVRGLVDRALEQKLTSKKAKFL
FKKWLTIEQRIGDVAGQDKAKTKAREWVEANAKPAQDEEEESDDEE
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaagaagggctcccaattatccaatgacaaagccacaaagaagacgcaaaag
gagagcttgtcaggagctcccagaccagccccagccttcacatcgactctccaaagcgat
gagaccgattttcctcgagggggcggttccactttgacggcgttcgaattcaagcaagtc
agagaagaaggaagaagggaggccgagaatgaagccaagctccaggtttccaagggcgaa
aagagaaaaaggcagatgagcgacagacaagccaaaaggttgaaaaagaatgaagatgcg
aagaagaaagaggaaagggataaggacaatatccgtgttgagatcctcaactacaagcga
ttggtccccggcactcacgtcctcgcccgtgtccacactgttttgcctctccacctgatt
ctttcccttcccaacaaccttttagctcacgtccctatcactgaggtttctaacacttta
accaagcttctcactgctgaagaagccatggctgtggaagaagatgaagagtcggacgac
gagtctaccgcacccgaccttgcccagttgttcgttcctggacagtatgtccctgcaaag
gttcttaccctttacccgactgctagtcaatcattcatttctcaataccctgtcaccgag
accaccaggctcgcttctcgagtggaattaaccctcatccctcaaaaagtcaactcggag
gttgcaaagaaggacctcgagaccggttatttcctggtgggcgaagttagatctgaggaa
gacaagggatggatcatcggtgttggcttgaacactgaggacggatcttccgttgaaggt
tttgtttccaaagacgaagtcgccaaatttgtccccgcccaggccctcatccccggtcaa
ctttttcccgccaccatctcctctattgcggctggaggccgtgtggttcatctttccctg
aaccagcaagatattgctcgttcacagatcagcgaagtgtccaccgtcggttctatcatt
cctggccactcagtaaatgcattgatcaccgcggtggttccctctggtttgaatgtcaaa
attgctgggttcttcgacggtactattgaccttgcccatcttcctcttggggaagatgac
attgaggaaaagtacaagattggcaagaagatccgggctcgagtcatctatgataatctc
gccgccaatccccattctttcgctctttcagcccttcctcatgtcttgaaccttacaagt
cctactcaagagggcgatgatactcctctcgaacttgctatccctatcggtaaagtgtat
caaagtgtcaaggtcaccagagttttaaatgactggggtgtcatggtcaggactcaggat
ggtttggaaggtttcgtccatatcagccatttggccgacgagcgtatccctgtactttct
aacgccacccctcaattcaaagtcggtaccctgcaccgcgctcgagtcattggccactct
cccatggacggtgtacttctcctctcatttgaacaatctgtcctttctcagcttttcatg
caagtcagcgagctcaaggttggtcagcaattgaggggtacgattcgtcgattgactgat
aagatgttgttcgtcaacgtccatggtaatgtcgatggtatcgttcatcccactcattac
gccgacatcagactgaagcatcctcaaaagaggttcaagccagaagcttctgtaaaggcc
cgtgttctttacgtcgagcccgccaggaacagagttgtcttgaccttgaaaaagaccttc
ctggagtcagatttggcagtccctcagagctttgaggatctgaaggttggagaagtaact
cttggatccgtgttgaagatcgtcgataagggtgtcatcgtggagttgttcgctggttta
aaggcctttatgcctcactcggagtgcagtcaaactcacatcaaagatctttctgaggcg
ttttacgttggcaagcccctcactgtccgcgtcatcaccttggacccatctacttctcga
attgttgtctctgtcaagcaagctgctcctactgcacctgcaactgctgctgaaaagctc
gaggttggcgaggccgtctctggcactgtctctcaagttcacactgaacaagtcgtcgtg
aagcttgaaggcagcggtttaactgcattattgagtttaagcaacttgagtaaccagagg
catacaggcattgaggagctccgaagaagtctcaagcaaggggagaagattgatgactta
gtcgtggtgtccaagaaccccgtctctggtttaatcattgttaacatcaagaagactatt
gctgcgaagaaggagaaggcgaagaaggaggataaagctccctccggtatttcggcaaat
gtcaaggccatcgatgccattgaagttgggcagattgttaccggaaccgttcaagaacaa
acttctcaggggtacatggtccagcttcccaacaaccttcgtggccgtgtccacccctgc
gactcctctgacgacctcgtccttgccgccggccgtggtcccctcagagttggcgaagag
gttaagtgttacgtccttgctgttaacaagtctaagcgtgctattgatctctctactcgt
ctttctcgagtggaaggcaaggaagacgtggttgacagggaaatcaacactgtggatgac
ttaaagcaaggtgagagcgttagaggtttggtcaagaacattgctggacatggagtcttc
gtttccttgggaaggaatgttaccgcgaggatcatgatcaaggaactctttgatgagtac
gtcaaggactgggaatctcgtttcgaaatcaaccaactcgtctcgggcaagatcctttcc
atcaaccccaaatccaactctattgagatgaccctccgcaaaaacccttcaaagtctgcg
aagaagaccgctctgctttctctgtccgattttgaagagggccaaaaagtcgttgctgtt
gtaaggaaggtcgaagcttatgggatgtttttgaagatcgaaggttcaaacgtcagcgga
ttgtgccacaagagtgaagtcacagacaacaggaaggcggatgttgcacaagccctcaag
ggcttcagagagggcgatcaggtgaaagctaagattgtctctattgatacggagaaagga
aagatctcgttcggcatcaaggcgagctatttcggtgaagactttgagggtggagagaag
agcgaagaggaggacgatgacgccgaagaggagaatgatgaggagctcagtgaaggggat
caagagatggaaagtggcgatgaaggatcgggtgaaggagaggaagatgaggatgaagac
gaggatgaggaggtgcgggcggttgaggaggaagatgaagaggatagctctgacgaagaa
gagatcgccccccaaaactctaagcctgctcctaaaactgctttgaacctcggtgctggt
ttcgattggaccggtgaggttcccgctgctgcacctgaatcagacgatgaatccgactct
gatgaagaggtcactgctcctgccaaatccaagggaaagtcaaaggctgttgaccttact
gctaccgctccctcttctaggccttcatccacagcagagtatgaacgcgctctccttgct
tcgcccaattcctccttcctctggatccagtacatgtctttccaccttcagcttcatgag
attgagaaggcaagaaaaattggcaggcaggctttggaaaagatctcgtaccgagaagaa
gaggagaaattgaacgtttggatggcattgatcaatttggagatcgccttcgggaccgtt
tctgcaactgaaaagctatttgaggaggccacccaatataacgacaagcggacggtatac
atgcgatatgctgaggctttgcaagtggccggaaaggatgaagcgcttgaggagctcttc
aagaagattgtcaagaagttctctgcctaccctgaatcctggacccgttttgctgagttc
tacctcaacaagggtgatgtggaagcggctcgagcacttttaccaaggagcatgaagtcc
cttgacaggtccaagcatgtcgagactattgaaaagatggccctcctcgaattcaagcat
ggggatacagaacgaggcaagactcttttcgaagggcttattgacaaattccccaaacgt
cttgatctctggggtgtctacatcgatcaagtcgctaaagtgggagatatccaaggtgtg
aggggcttagtagacagagctcttgagcagaaattgactagcaagaaagccaagttcctg
ttcaagaagtggttgaccatcgaacagagaataggcgatgtggctggtcaggacaaagcg
aagacgaaggcgagagagtgggtcgaagctaatgccaagcctgcccaagatgaggaagaa
gagagtgatgatgaggaataa
DBGET
integrated database retrieval system
