Cryptococcus deuterogattii: CNBG_4225
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Entry
CNBG_4225 CDS
T09796
Name
(RefSeq) uncharacterized protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CNBG_4225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdeu03019
]
CNBG_4225
Messenger RNA biogenesis [BR:
cdeu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CNBG_4225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
88180455
NCBI-ProteinID:
XP_062883907
LinkDB
All DBs
Position
6:complement(<1244214..>1246848)
Genome browser
AA seq
768 aa
AA seq
DB search
MDIDEDDAFLYGDEPQHQESTAQAQAQEQAQAQAAKESAISASMAASLAAYGIDASAAVV
ETLPENPEDGGVEEEDEGDEDEDEESDEDDVKLVFTGGSSRQLDLRKPQQAPAVVGIGKW
AHASTGSQAPATPSTPQAGQVTGTPTKPSQNVPGQTTEYTPAPRPSASATPQPQPVNALA
NPPIAPTSQAPNLQPQPSTITNAVAANGPPTNPNLPPSHLPPVTNPAANPRFDPSNPSGV
IPSSGQSVYDIDLSLFEGSGQPWRLPGAVVSDWFNFGFDEHTFPKWVRYRTEMGEGVKSL
AGGGGLGAGAGVGGDTMNQMGVNGMNGMNPQAQAQAQAAAAAAAAMQGMGGMGGMMPNQM
QAQMQQMQQMQQMQQMQQMMAMGGMPGMQGMDMGMMGQMGQMGGMGGMGGMGGMGQMGQM
GQMGARQGVRPNNPTAGNAVANNANANANANATANSNSGGQEVKQEEGEHVEQSSTGATP
TGRAPPPPGRNMNVGPTISSSGPAAVTPNAGAVNPAAAAAAANVAGTANSSATTANAATA
NANANTAAHVPTGPRATTAVPLGPRAGAGMVPTGPKGRFRDKDRVVDVGSASGGTLDYGG
GDDVVPPATSASASASNANANAGSGSGMRSTSKRDRERDRERERERDKESHSRDSRGRDR
GRDKDRDRERERERGEYDEEGYTSDEKDRERRRRRERSERSDKDKERSDKRKREGGSVSA
SASLGPGGWEEGEEEEEYVVPRERERERTRRKRSESEEDEGHRRSKRR
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgatgaagatgacgcttttctctatggcgatgaacctcaacatcaagaatct
actgctcaagctcaggcgcaggagcaagcacaagcacaagcagcaaaggagagtgcgatc
agcgcatcgatggcagcgtccctcgcggcatacggtatcgacgcctctgcagccgttgtc
gaaactctccccgaaaacccggaagacggtggtgtcgaagaagaagatgaaggagatgaa
gatgaggatgaggaatcagacgaggatgatgtaaagcttgtatttactggagggagctcg
cgacagttggatttgaggaaaccgcaacaggctccggcagttgttgggattggaaaatgg
gcacatgcgagtacaggttcgcaagcgcctgcgacgcctagtacgcctcaagctggtcag
gttaccggtacgcctaccaaaccatcccaaaacgtccctggacagaccaccgaatacaca
cccgcacctcgtccttctgcgtctgccacccctcaaccccaacctgtcaacgcgctggcc
aacccgcccattgcgcccacctcccaagcacccaatctccaaccgcaaccttcgactatc
accaacgccgtcgccgccaacggccccccgacaaaccccaatctccctccttcccactta
cctcccgtgaccaaccctgccgccaacccacgattcgacccatccaacccctccggcgtc
atcccttcctctggccagtcagtgtacgatatcgatctttccttattcgaaggttccggc
caaccgtggcgcctgcctggggcggtagtgagcgattggtttaatttcgggtttgatgag
catactttcccgaaatgggtgaggtatcgaaccgagatgggtgagggtgtcaagtctctt
gctggtggtggtggtcttggtgctggagccggggtgggtggtgatacgatgaaccaaatg
ggtgtgaacgggatgaatgggatgaacccgcaagcccaagctcaagcgcaagcagcagcc
gcggcagcagcagcgatgcaaggtatgggcggtatgggtggcatgatgccgaatcagatg
caagcgcagatgcagcagatgcaacaaatgcaacaaatgcagcagatgcaacagatgatg
gcgatggggggtatgccggggatgcaggggatggatatggggatgatggggcagatggga
cagatgggtgggatgggaggaatgggtggaatgggcgggatggggcagatggggcaaatg
gggcagatgggtgcaagacaaggtgtccgtcccaacaaccctaccgccggcaacgccgtt
gcaaacaacgccaacgccaacgccaacgccaacgccactgcaaactcaaactctggagga
caagaagtaaaacaagaagaaggagaacacgtcgaacaatcatctaccggtgccacacct
acgggcagggcaccaccgcctcccgggaggaatatgaatgttggacccaccatttcttct
tccggtcccgcggctgttactcccaacgccggggccgtgaacccggctgctgctgcggct
gctgcgaatgtagctggcactgccaactcctccgccaccactgccaacgccgccaccgcc
aacgccaacgccaatactgcggcccacgtgccaaccggtccacgcgcaacaacagccgtc
cccctcggcccccgcgccggggcggggatggtgcccacaggcccgaaaggaaggtttagg
gataaagatcgggtggtggatgtaggttctgccagtggggggacgttggattatggtggt
ggggatgatgtagtgccgcctgctacttctgcttctgcctctgcttccaatgcgaatgcg
aatgcggggtcgggttcggggatgaggagcacgagtaaacgtgatcgggaaagagatcgg
gagagggaaagggaaagggataaggagagtcacagcagagatagtagagggagagatcga
gggagagataaagatagggatagggagagggagagagagaggggagaatatgatgaagag
gggtatacttccgacgagaaggatagagagagaaggcgaaggagggagaggagtgaacgt
agcgacaaggataaggagcgtagtgataagaggaaacgggaagggggaagtgttagtgcg
agcgcgagtttgggtcccgggggatgggaggaaggtgaggaggaggaagagtatgttgta
ccacgagaaagggagagggagaggacgaggaggaagaggtcggagagtgaggaagatgag
ggacatagaaggagtaagaggagataa
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