Cryptococcus deuterogattii: CNBG_4301
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Entry
CNBG_4301 CDS
T09796
Name
(RefSeq) U3 small nucleolar RNA-associated protein 20
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
cdeu
Cryptococcus deuterogattii
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cdeu03009
]
CNBG_4301
Ribosome biogenesis [BR:
cdeu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CNBG_4301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
TTI1
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
88180524
NCBI-ProteinID:
XP_062884204
LinkDB
All DBs
Position
10:555784..564253
Genome browser
AA seq
2657 aa
AA seq
DB search
MEEPPQKRFKYTSYTDQIKNITLDTGNKRGLAWETEQYNEDTEQTNTPLTAQLDRLSLLD
LTVPYQDLQRALLPLTNTLPITLHNLSEIQTIFHEFYAKLNDGQEHIHSGLDSALYLHQA
LYETCLGEALAYVPETVSDLLRVGALRALDPKLVERTYSTLSLILRTMASSLLKPNEASR
STLKKTWIIINPYLSPKSNKRYIRRCVADAWVGVIRKARSEGLARLMELLMEDNVEGMEA
VWAHSLKGASGQLHSRALAIYTILLDNLVKNPIPQHTTTLGLVSIALIHHASASVVQPVI
ELVIGKLESDTIALPSSTAVLNVLSAFLFTRKGKRFPEATLKPLMQKLLSLVPKLATDAA
VNEDMNKDEAEIKEQWRKTFVVCIVGSLQAGQLAQWLSPGVTLINSLWQKLNDRECFSFV
NALIALKWTGIEQFILSHVAKASLPSLKSEPLSTLILLNNLAASGYLSGGLSNVQGGRWR
QALISALVGLLKSLTKLNLDLNERRITGQALKLLPALPSDADKFAPQVVKILESVLDRLD
SKDLEAVKAEWEESGAWNDTHLVGSLLHTVDELIASPKADVSKDAKELLVSKGWLNKVLE
KWYWNRQVMESAVPHVERWASNLGLSHDVILERFMPNLISSDSILRLSSLQILAAVAPGT
ALAPNSEENTTSLREIYNLCVQIESSEMTLRNVRERTTNISRLIRSISALPVAMPKLVLN
GIVTYLVAQFKVNFRPVYPETVAALSTLTEKHKEEVWEIVWTQLERTNSAKEAVAVDLDA
KNPDWAEEQGSHEDRLEKDEEEAEFRCPNLEKSKVVFSKVWGKRSQEEKLDQQEISVQVS
HDKLDVLNYESQLLATLAAIPSVAEKHSRLIIPVVFSVARQGTSDQDDELQSATHLSTKQ
LQARTANYLELLTKFVNPKAAFRSEELHNLYLDILSKGEPRLQGLALKCLMTYKSPKLTP
YEEPLENLLVDNKFRDELARLRLGVDSQDYALAARDSEATGKTRVVVIEPTHRDEALPVI
IRLLYGVITSRRGRSSSSQGQGARKQAVLSALNGCSESELGVLVDLMLEPFGSTVEDVGK
VPGRQQMGFLSLLTDVIRYLGPQLGSHWAKLVSTTISLVANAQERLTTSNIVTEDVNEGE
EGEGVEAEKGMAPLRNIRSIGLKRLVQFLRSPVTFDVKPYLPTIFNSVISPRLDKLEVEN
TQAPSGTLDLIATLAGEPDLARQLTALDNRTLPKAFACMTAVKVKPAVVLKVFDILESLL
PEDDEEEITKEVLLPHIRVLIDNIIGLVGSLKSSQNDDITRRLLGILSRLSIIVEDGTQA
QQLATLLAPMLRHKQTPERAKTNILATLQRLYAISPDFADPSSKFFYQSYDLISSLFQSL
FFSTSRRALVSTLETFIAVDKSLEKSIKLVADLNAYSTRRLEEPDFDRRLSAYEEINDAE
VENLPSDIRAWLPILRTSLFFLHEPEELSIRTNASAVLQKFITLIGDSSEGPYVEALQNI
ILPGLKRALKSKQELVRNEALLAIAHGVKTCEGVPELTEMRPLLAHGDDEASFFTNIAHI
QVHRRTRALRRLRDIIAEPTTVIRESSLTSIFLPLLEHVIAGATDVTDHHLINEAIQTVG
SLARELRWGKWYGLIGRYMKLGIGSGKTGQQKYYVRSVAAVIDGFHFELSEGMDMDKEEE
ERDEENGEEEDEDEELEKKKVEGATPEKITAILLNKLLPSLSRFVSDKDGTDSAIRVPLA
LGIVKIAHALPRNSSDIEVLRVITNVAQILRSKDQDTRDITRETICKIALYLGPEWLVRI
IKELEIALPRGPQKHVLAVTTHAILVQATTQAADRFINLDDAVELAVQVTAEVIWGESGK
DVATEGFKTKMREVRGATSRGFDTFQLLSQLVSPSKIGAILVPLREVMHASQAVKPMQQV
DEALRRISLGLNANTLLSAEELLSLCYSLISGNSSYLKAKRKAVRPTETPDAFKVVMKRD
VKKEEDFYPANAHKFVMFGLDLFVTAFRRGKFDFDDVNILARLGPMVNAVGNTLYSPATN
VLLLSLKATAAVARCPVPQVEPALHVFINNIFKIIKNAGGTAESEVAQTALKTLAVILRD
CKSSEISENQLRYLIEVISPDLEEPERQSAIFTILRSIITRKFVVPEIYDLMERVSSIMV
TSQSTQVQELCRGSVMAFLLDYPQGKGRLKSQMTFFAQNLQYTYEAGRLSVMEVLFAVFE
KFSEALIEEYAGMFFVALVVVRANDDSEKCRIAAGELLKLLWRRLDEAERAKMAEVVKSW
VAKRDENEALAGAAMGVMGLLVETGENGLEEVISVIEPVLSESAARLQEAEEEDEIVDLD
YTLPHQTLSTTAKLVLATPSSSSALPWSNIVPHLLFPHDYVRYDTAKLLSNLFANGSETS
AVCEMLGDELCLDIARKGCLVLKGNRDDSGEWIIGSGKLADEIVKVLWNISRHWASSEVV
SAPAGEEDAGDDHDVEEPTRNPLAWLMSRMSFLARHLIVNRPAPNSYQAQEPWSAPIMSI
LRFFAGITESLSKAQAVGFLLHILSPVYRILDEGGDLGQVEEKQVDDLRALATQIREFVQ
EKTGTTAFSRKWEKLRQATQAKRLGRREERVKLAVTNPEKYAERKGKKVERAKEGKKRKN
VAFAEGRKTAGAKKRRQ
NT seq
7974 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacccccgcagaagaggttcaagtacacctcttacacagaccagataaaaaat
ataaccctggacactggcaacaagcgaggcctcgcatgggagactgaacagtacaatgaa
gacaccgaacaaacaaacactcctttaacagctcagctcgatcggttatcacttctcgac
ctcacggtcccctaccaagacctgcagcgtgctctgcttcctctaaccaatactcttccc
atcactctccataacttgtcagagatccaaacgatattccatgaattttacgccaagctc
aatgatggacaagagcatattcattcggggcttgactcggccctgtacctccatcaagct
ctgtatgagacttgcttgggcgaagctcttgcatacgtccctgaaacagtcagcgatctt
ttgcgggtcggcgctttgcgagctcttgaccccaaactcgttgagaggacatactcgaca
ttatctcttatccttcgaactatggcatcttccctccttaaacccaatgaagccagtcga
tcgacgctcaagaaaacatggattatcatcaatccttatctcagccccaaaagtaataaa
cgttatattcgcagatgcgtggcagatgcatgggttggagtcatacgaaaagccaggtcg
gaagggctagctcggctgatggagctgttgatggaagataatgtcgagggtatggaagct
gtttgggctcatagcttaaagggcgcttcagggcagcttcattccagagctctggccatt
tatacaattttgctcgacaaccttgtcaaaaacccgatccctcagcatactactacccta
ggcctggtcagtatcgctctcatccaccacgcctcggcatcggtcgtccaaccggttatc
gaactggtcatcggcaaactggagtctgacacgatcgctctaccctcttcaactgctgtt
ctcaacgtcctctcggccttccttttcactcgaaaaggcaagcgattccccgaagcgact
ttgaagcctcttatgcagaaacttctcagccttgtgcccaagttggccactgacgccgcc
gtgaatgaggatatgaacaaggatgaggcggaaatcaaggaacagtggaggaagacgttt
gtcgtttgcatcgttgggtcattacaggctggtcagcttgctcaatggctaagccctgga
gtgacacttattaacagcctttggcaaaagctgaatgacagggagtgtttctcttttgtg
aatgctttgatcgcacttaaatggactggtattgagcagttcatactctcccacgtcgca
aaggcatcacttccttccctcaaatctgaacccctctctacactcatccttctcaacaat
ctcgccgcctctggatacctttccggtggactctccaacgtccaaggaggccgctggcga
caagccctcatatcagcacttgttggcttgcttaagtctcttaccaagctcaacctcgat
ctcaacgagcgtagaataacgggtcaggctttgaaacttttgcctgctttacctagcgac
gcagacaaatttgctcctcaggttgtcaagatcctcgagtcagtattagatcgcttggat
agcaaggatttggaagcagtcaaggcggaatgggaggagagtggtgcatggaacgacacg
catttggtcggttcccttttgcataccgtcgacgagcttattgccagtccgaaagccgac
gtgagcaaggatgccaaggagctgttggtaagcaaagggtggttgaacaaggtgctggaa
aagtggtactggaataggcaagtcatggagagcgcagtgcctcatgtcgagcgatgggcc
agtaatctaggtctctctcatgatgttattcttgagcgattcatgcccaacctcatctca
tcagactctatactacgtctttcttcgctccaaatccttgctgccgtcgctcccggtaca
gcgctcgcacccaactctgaagaaaatacaacctcccttcgagagatttacaatctctgt
gtccaaatcgagtcttccgaaatgactctgcgcaacgtccgagaaaggaccaccaacatc
tcgcgattgattagatccatctctgcattgccggtggccatgcccaaactcgtattgaac
ggtatcgtgacctaccttgtggcgcaattcaaggtcaacttccgcccagtttatcccgag
acagtcgctgcgttgtcgactctcacagaaaagcacaaggaagaggtttgggagatcgtt
tggacccaacttgaacgcaccaacagtgctaaagaggcggtcgctgttgatctcgatgcg
aaaaatcctgattgggcagaggagcaaggatcacatgaggataggttggaaaaggatgaa
gaggaggcagagttcaggtgccccaacttggagaagagtaaagttgtattcagtaaagtt
tgggggaaaagaagtcaggaagaaaagttggaccagcaagagattagtgtccaggtctcg
cacgataagctcgatgtgctcaattacgagtctcagctgctcgctactcttgctgcaatt
ccatctgttgccgaaaagcactcccgcctcatcatccctgtagtcttctctgtagctcgt
caaggcacttcagaccaggacgacgaactccaatctgccactcatctgtcgaccaagcag
cttcaagcgcgcactgccaactatcttgaacttcttaccaaatttgtgaaccccaaggcg
gcgttccggtcagaagagcttcacaatctttatcttgacatcctttccaaaggtgaaccc
agacttcaggggttagctcttaaatgcttgatgacatacaaatcgccaaagctcacacct
tacgaggaacccttggagaacttgcttgtggacaacaagttccgagatgaacttgcccgt
cttcgattgggagttgacagtcaggattatgctctcgccgctcgagattccgaagcaacg
ggtaagacccgagtcgtagtcattgaacctactcatcgggacgaagcgctacctgtcatc
atcaggctgttgtacggcgtcattacctctaggcgagggcgatctagtagttcccagggg
caaggagctaggaaacaagccgtgctcagcgctttaaacggatgctcggagagtgagctt
ggtgtgctcgttgacctcatgcttgagccctttggctcaactgtggaagatgttgggaaa
gtcccaggtagacagcaaatgggtttcctctcacttctcaccgatgttattcgctacctc
ggtccccaacttggttcacactgggcaaagttggtcagtaccaccatctcactggtggcg
aatgcccaagaacggctgaccacgtccaacattgtcacggaagatgtaaatgaaggcgaa
gagggcgaaggtgtcgaggcggagaagggaatggcaccactcagaaatatcagatcgatt
ggtctcaagcgtttggtacagtttttgcgttcgcctgttacctttgacgtcaagccatat
ctgccgaccatcttcaactcggtcatctcccctcgactcgacaagctcgaggtggagaat
actcaagcgccttcaggaacccttgatttaattgctactcttgccggtgagcccgacttg
gccagacagttgaccgcactggacaacaggacattgcccaaggcattcgcctgcatgacc
gccgtcaaggtgaaacctgcggtcgtgttgaaggtctttgatatcctcgagtccttgtta
cctgaggatgacgaggaggaaatcaccaaggaagtgctattgcctcatattcgagtactc
attgataatattattggtctcgttgggtctctcaagtcatcacagaatgacgatatcacc
cgtcgattgcttggtatcctttcgcgcctctcaattattgtcgaagatggtacgcaagcg
cagcagctcgctactcttcttgcgcccatgcttcgtcataaacaaacccctgaaagggcc
aagacaaacatcctcgccacacttcagcgactttatgccatctcgccagatttcgctgat
ccttcaagcaaattcttctaccaatcctacgatctgatctctagtctgtttcagagttta
ttcttctccacatctcgtcgcgctttggtcagcacgctcgaaacttttatagccgtcgac
aagtcattggaaaagtcgatcaagcttgttgcggatttgaacgcttattctacgagaagg
ctggaggagccagacttcgatcgacgtctgtctgcgtatgaggagatcaatgatgctgag
gttgagaacctaccgagtgacatcagggcttggttaccgattctcagaacatcgttgttc
ttcttgcacgagcctgaagaattgtccattcgaacgaatgcttccgcagtcctgcagaaa
ttcattactctaatcggcgactcttctgaaggaccttatgtcgaagcattgcagaacatc
attctccccggtctcaagagggcactcaaatcgaagcaagagctggtgagaaatgaggca
ttgctggcgatcgctcacggagtgaaaacttgtgaaggtgttccagagctaacagaaatg
cgtccactcttggcacacggtgatgatgaagcttcattctttaccaacatcgcccacatt
caggttcacagacgtactcgtgccctccgccgtcttcgtgatatcattgccgagcctacc
accgtcatccgcgaatcttcacttacatcaatattccttcctttgcttgagcatgtcatc
gcaggcgcaaccgatgtgacggatcatcatcttattaacgaggcgattcagactgttggt
agtctggcgagggagctcaggtggggcaagtggtatggattgattgggagatacatgaag
ttgggtattggaagtgggaaaactggacagcagaaatactatgtgaggagtgtggccgcg
gtgattgatgggttccatttcgagttgagcgagggaatggacatggataaggaagaggaa
gaaagagacgaggaaaacggcgaagaagaagatgaggatgaggaactggagaaaaagaag
gtagagggtgcaactccggaaaagatcaccgcaatccttctcaacaaattgcttccatcc
ctctcacgttttgtctctgacaaggacggaaccgacagtgccattagggtcccgcttgcc
ctgggaatagtcaagattgcccacgctcttcctcgcaactcttctgacattgaagtgctt
agggtgatcaccaacgtcgcccagattcttcgaagcaaagaccaggacactcgagatatc
acgcgtgaaacaatctgtaagatcgctctctaccttggtccagaatggcttgtgcgaatc
atcaaggaattggaaatcgcccttcctcgaggccctcaaaagcatgtcttggctgtaaca
actcatgcaatcttggtgcaagccactactcaagccgcagacaggtttattaatctcgat
gacgctgtcgaattggccgttcaggttaccgccgaagtcatttggggtgaatcaggcaaa
gatgtggctacggagggcttcaagaccaaaatgcgagaggtgcgaggagccacttctcga
ggctttgacactttccagcttctttcgcagctggtttctcccagcaaaatcggtgctatt
ctcgttcccttgcgcgaagtcatgcacgcttcacaggcagttaagcccatgcaacaggtc
gacgaggctctccgacgcatctcactcggtttgaatgccaacacccttctcagtgcggaa
gagttactttcgctctgctattctctcataagcggtaactcttcctatctcaaagcgaaa
cgtaaggcggttcggccgaccgagacgccggatgcttttaaggttgtcatgaagcgagat
gtcaagaaagaagaagacttttatcccgccaacgcccacaagtttgtgatgttcggtctt
gatctatttgtcactgctttccgtcgtggaaaattcgactttgacgatgtcaatatcctt
gcccgccttggacctatggtcaatgctgtcggtaacactctttattcccctgccaccaat
gttcttctactttctctcaaagctaccgccgccgttgctcgatgtcctgttcctcaagta
gagcccgctttgcatgtcttcatcaataacatcttcaagattatcaaaaatgctggtgga
acagctgagtctgaggtggctcagacagctttaaagactcttgcagtcatcttgagggat
tgtaagagttcagaaatctctgagaatcaactgcgatacctcatcgaagtcattagcccc
gatctcgaagagcctgagaggcagtctgccattttcaccatcctccgatccatcattact
cgcaagtttgtcgtcccagagatctacgacctcatggagcgtgtctcatccatcatggtc
acatctcaatctacacaagttcaagaattatgtcgtggctctgtcatggccttcctactt
gactatcctcagggcaagggacgactaaagtcccaaatgacctttttcgctcaaaacttg
cagtacacttacgaagctggccgtctttccgtgatggaggtcctctttgccgtgtttgag
aagttctcagaggccttaattgaggaatacgccggcatgtttttcgtggctcttgttgtc
gttcgggcgaatgatgactctgagaaatgtagaatagcagcgggcgagttactcaagctg
ctctggagacggctagatgaggcggaaagagccaaaatggccgaagttgtcaagagctgg
gtggcgaaacgtgacgagaacgaggcactagccggtgcagctatgggtgtgatggggtta
cttgtcgagacaggcgagaatggtttagaagaggtgataagtgtgatcgagcctgttctt
tcagagagcgctgccagacttcaagaagctgaagaagaggatgagatcgttgacctcgac
tacacccttcctcaccaaacactctccaccacggccaaactcgtacttgctactccctca
tcttcttccgctttaccatggtcgaacattgttcctcatctccttttcccccacgattat
gtccgatacgacacagccaagcttctctctaacctttttgccaatggttccgagacgagc
gctgtctgtgaaatgcttggagacgaactctgtcttgatatcgccagaaaaggttgtttg
gttctcaagggtaatcgagatgacagtggagaatggattattggtagcggcaagttggcg
gacgagattgtcaaggttttgtggaatatctccagacactgggcatcttccgaggtcgtg
tctgctccggctggtgaggaagatgctggagatgaccatgacgttgaggaacctacccga
aacccgctggcctggcttatgtctaggatgtctttcttggcccgtcatctcattgttaac
cgcccggcccctaacagttaccaagctcaggagccatggtccgccccgattatgtcaatc
ttgcgtttctttgcaggtatcactgaaagtttaagcaaagcgcaagctgtgggattcctg
ctgcacattttgagtcctgtatacaggattctggatgaaggcggtgatttaggacaagtt
gaagagaagcaagtcgatgatttgcgagctctcgcaacgcagattcgcgaatttgtacaa
gaaaagactggcactacagccttctctcgaaaatgggagaaactgcgacaggctacgcag
gccaagagattgggacgtcgtgaggagcgtgtcaaattggctgtaaccaacccggagaag
tacgcggagaggaaaggcaagaaggtcgagagggccaaagaaggaaagaagaggaagaac
gttgcttttgctgagggtagaaaaactgctggggcgaagaaaaggagacaatga
DBGET
integrated database retrieval system
