Cryptococcus deuterogattii: CNBG_4344 Help Entry CNBG_4344         CDS       T09796                                  Name (RefSeq) senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism cdeu  Cryptococcus deuterogattii Brite KEGG Orthology (KO) [BR:cdeu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cdeu03021]     CNBG_4344 Enzymes [BR:cdeu01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      CNBG_4344     5.6.2.5  RNA 5'-3' helicase      CNBG_4344 Transcription machinery [BR:cdeu03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      CNBG_4344 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel AAA_30 Viral_helicase1 AAA_19 UvrD-helicase nSTAND3 AAA_22 Motif Other DBs NCBI-GeneID:  88180565 NCBI-ProteinID:  XP_062884245 LinkDB All DBs Position 10:449702..456627 Genome browser AA seq 2118 aa AA seqDB search MSSDKPRPEDVEALLAARRKVQEKPNTDALLPVYLYLLPPSNEAQSSSSSLEDHWYCNKS KSALHTEAATYLIFLFAFQRQGTSKTWVDKLEVILESCENCARSFGVARRRLEFRYLSEW PAHVRKNFFAAVDRWQSAFILNHSDKANDRGYGKLSSTEPALYSLSRPIVQLLLGEPSLL SDPGVNSLYQEAFQSTSPTPSSLTVLGMTPVHARLLSSSEPEQNRWSAGQLPAFARRPLR FSEWCTLGIGSEFQDLYNDGMLDGQKRWHNVAAILDNKVLDQETVEKGLLDGQLENDARG RKGRGVMSVLSGLLSSDISYMESVISCLASLLRTSPTRHIWSFDTSPDLPHTLISELRTN PAFHELLETCYPAPLDSEADDHGAPRNSSGKSKELRKPDKNPLDWLGDYLLSVADTEKRM ITQTGEGKGSGMAFAEALAVVTNMVYQELQHSRLSNELRATAASAGFEAILRFYQTLNAE DVSINTAISSTLDLHSSFITTVAFRSKNHPPPAWSEARSSARSLLTIIFQADARSTVHSL LTMAAVAHEERKRQQKKRRNKSDVAVGPAKKVDHLPLASVRKDLWSMAYDALSPSDAAGA GILLKSLAPFSHIELLDRQASWYHHGLEEAVKKEEWVGGIRAINIAIKATRESFPRAIES LASQTDPSGVRSLWKEQGVAKAATILLLSPDDEIHTPIISIIQQSFDDVDDRGDCFRALL QHYPDAAIDGLNDFLRTFIETARITPESCSLAKWLVRCFHDVLEVLCRPSGILGPLLQSD DFLASFADGRSMRKRLEELWHLMTTSLALIFKRTLDWAPHFENEVMVDWMRDALIFGRQM TDHIRAFEAAVLGTSARGNETMSESSARQSLVGKKMTKQLELVLSDLILWLRLTDIETLF QTHQLIKTILQRISKSTTDVSKNPALERTLLDIDKFCRKASRSFTSRLSDDLLSELSELL EPFNLVDDSEVQFVKEVKPKSSSDVVTSRESTPNISKSSMSKAPVRNAFAEMMKASGGKL ASSNKTSTSTAKSKPSAPSDVIDVDDFDDDFLSNISASDLDLIEKRAFMKESARQAPPKP SIQSRLSTSARPHMPSNKLHVDLTYKAPPKPASSFQSKVMQDIRREHYASIHERKRLEAG QVAPKLPTASALGSGLGAYTGPPKPRVIEPVDSGSSASDSSDDERTAMKGLLSKQKSPAK PIRPIVEKRSIRVLGDPIAEIHRRNEDRRAKAHATKMRLKPDLSSLYRYILSWDPDHSGQ SPPHGAKFAAELSDMRVVPTTFHNPKHYERIMLPLFLQELWSQCANDQVQVGPAVPVEVA SRQYEDDFVEIDLMVVGRGDFYCNDSDLVTLRQPNNPKGIFAKIMAFKKHPKGSMIRARI MSVMDQKELCGKSKWQLRKHVSLSTSIREFAALKGLPWYESSLLSDIMGGRSAIMPKLST EKIEDTMKCLSLNEPQAKAVLGALEVKGFTLIQGPPGTGKTKTISGLVGRWMSERKIPIS VDGQPPVKPKLLVCAPSNAAIDEVCKRLILGVPNPDGGQYNPSIVRVGIDASVNIAVKDV SLDSLVEAVVSNSSGRNIGGEYGRIQAELDDVKQQIKDKQEAIKLAQDHDEKRKVLEDEY HALITRRTQLGQASSKAKDAARDATRHLDGARRAARDQILKDADIICATLSGAGHDTLAA HTFETVIIDEAAQAIEMSCLIPLKYGCKRCIMVGDPNQLPPTTFSANAEKLQYNESLFVR MTKRDASHVQLLSIQYRMHPFISELPSKVFYHGQLKDGPSMAKKTAAIWHQRNIFGPYRF FNIEGTEIKTGTSTKNPAEALAAVELYRRLNADFGTRVNLAMRIGVISMYREQLWELKRK FTEAFGSTILELVEFNTVDGFQGQEKDIIILSCVRSGPNLKHIGFLKDTRRMNVALTRAK SSLFIFGNGPTLERSDERWKIIVQDARDRGFFINYDSTTFNAAVLEPPPSVKKRGSVSKS KASPGAPRSTTVPDGLLPPKDLAADISTPSKVKREASVELSKEKKKKRKTSDGLSRAEEP TSRVAVTATVPSSRLSSESAMSAVKHAEDSPQLSSSKPPPLRIPLPPQPSNFPKMARPHP PPPEDVLFIKKKKKRPNK NT seq 6357 nt NT seq  +upstreamnt  +downstreamnt atgtcttctgacaaaccacgtccagaggacgtcgaagccctcctcgctgcaaggcgtaag gttcaggagaaaccaaatactgacgcccttcttccggtttacttgtatctgttaccccca tcgaatgaggcgcagtcgagttccagctcattggaggatcactggtattgcaacaagtcc aagtccgctctccacactgaggctgctacgtatcttatattcctctttgccttccaacga cagggcacttcaaagacttgggtcgataaattagaggtcattctcgaatcatgcgagaac tgtgctaggagctttggagtcgcgaggaggcgcttagagtttagatatctctctgaatgg ccagcacatgttcggaagaatttctttgcggctgttgatcggtggcaaagcgctttcatt ctcaatcattcagacaaggccaatgacagagggtatggaaagctgagttccactgaacct gcgctctactctctcagtcggcctatagttcagttgctattgggtgaaccatcgctgtta tctgatccgggtgtcaatagtttgtatcaggaggccttccaatcgacgtcccctacgcca tcatcactcaccgttcttggaatgacccctgtacatgctcgcctactgtcctcctcggag cctgagcaaaatcgttggtctgcaggccaactgccggcttttgctcgtcggccacttcgg ttctcagaatggtgcactttgggaatcggaagcgagttccaagatctatataatgatggg atgctcgatggacagaagcggtggcataatgttgcagcgattttggataataaagttctc gatcaagaaactgttgaaaaaggtcttctggatggccaactggaaaatgacgcgcgagga agaaaggggagaggtgtgatgtctgtgctgagtggccttttgagtagcgacatttcttat atggaatctgtcatttcctgcctggcttctcttttgcgcacttctccgactcgacatata tggtcattcgatacatctcccgaccttccgcatactcttatatcagagcttcgaacaaat ccggcatttcacgaacttctggagacctgttatcccgcaccgctcgattccgaagctgac gaccatggtgctccccgcaacagcagcggcaagagcaaagagctacggaagccggataag aacccattggattggttaggtgactatctgttatctgtggcagacacagagaagagaatg attacccaaaccggtgaagggaaaggatctggaatggcatttgcagaggcccttgcagta gtcaccaatatggtctaccaagaacttcagcacagtaggctttcaaatgaattacgtgct actgcggcttccgctggatttgaggcaatccttcgattttatcagacactgaatgcagaa gacgtgtccataaataccgccatctcctccacattagaccttcactcttcatttatcaca accgtcgctttccgctccaagaatcatcctcctcctgcatggtctgaagctcgtagttct gctcgtagtctcctcaccattatttttcaagcggacgcacgatcgacagttcatagttta ttaacgatggctgccgtagcccatgaagaaagaaaacgtcagcaaaagaagcggagaaac aagtccgacgttgctgtgggtcctgccaaaaaggttgaccatctgccccttgcatccgtg cgaaaagatttgtggtccatggcttatgacgcgctgtcaccgagcgatgcagcaggtgcc ggtatcctgctcaaatccctcgcgcccttctcacatattgaattacttgacaggcaagct tcatggtatcatcacggtctagaagaagcagtaaaaaaagaagaatgggttgggggaata agagcaattaacatcgccatcaaagctacacgtgaatcttttcctcgtgcgatcgaatct ttggccagccaaacagatccttcgggtgtcagatcattatggaaggaacagggagtagcc aaagccgcgaccatccttctattgtcccccgacgatgaaatacatacgcctatcatcagt atcattcagcaatcgttcgatgacgtcgacgatcgaggggattgtttccgtgctctcctc cagcattatccagatgcagccattgatgggctcaatgattttttacgcactttcatcgaa acggcaaggatcaccccggaatcatgttctttagcgaaatggcttgttcgttgctttcac gacgtgcttgaggttctctgccgaccatcaggtattttagggccccttctccaatcagac gatttcctggcttcctttgcagacggcagaagcatgcgaaagagactggaagagctttgg catctcatgaccacgtctcttgctctcatcttcaaacgtactcttgattgggcacctcat ttcgagaacgaggtaatggtggactggatgcgggacgcacttatctttggtcgacaaatg accgatcatattagagctttcgaggcagcagttttgggaacgagtgcaagaggtaatgaa accatgtcagagtcttcggcaaggcaaagtctagtgggcaaaaaaatgacaaagcagttg gaattggtgttgtcggatcttatcttatggctcagattgacggatattgaaacactgttc cagacacatcaactcatcaaaaccattttgcagaggatcagcaagagcacgactgacgtc tccaaaaaccctgctcttgagaggactttgctcgatattgataaattctgtcgtaaagcc tctcgaagtttcacaagtcgactctctgatgacttgctttccgagctttctgaacttctc gaaccttttaacctggttgatgattccgaagtgcagtttgtcaaggaagtcaagccgaag tcgtcttcagatgttgttacctcgcgcgagtctactccaaatatcagcaagtcctcaatg tctaaagctccagttcgcaatgcgttcgccgagatgatgaaggcatctggtggtaaactg gcatctagcaacaaaacctcaacgtcgactgcgaaatcgaaaccgtctgcacccagcgac gttatagacgtcgatgactttgacgacgatttcctcagcaatatttcggcttccgacctt gaccttatagagaagcgggctttcatgaaagaatccgctcgtcaagcacctccaaaaccc tcgattcaatcgagactttccacttctgcccgacctcatatgccctcaaacaaactgcat gtcgacttgacttataaggcaccccctaaacccgcttcctctttccaatcaaaggtgatg caggacatccgaagggaacactatgcttccatacatgaacggaaacgattagaagcaggg caagtcgcaccgaagttacctacggcatcggctttaggcagtggacttggagcttacacc ggccctccaaagcccagagttattgaacctgtagacagtggctcgagtgcatctgactca tcagatgacgagagaaccgcgatgaagggcctactctctaagcaaaaatctccagcaaaa ccgattcggccgattgttgagaagagatccatcagggtactaggcgaccctatagctgaa atccatcgacgtaatgaagaccgcagagccaaggcccatgctactaagatgaggcttaag ccagaccttagctctctttaccgttacatcctctcttgggatcctgatcactctgggcag tcacctccgcatggagcgaaatttgcagctgagttatcagatatgcgcgtagttccgacg acgtttcataatccgaaacattacgaacgcatcatgcttccattgtttttgcaggaactt tggtcacagtgcgcaaatgatcaagtgcaagtgggacctgctgtgccagtagaggtcgca tcaaggcaatacgaagatgactttgtagaaattgatcttatggtcgttgggcggggtgat ttctactgtaacgactctgaccttgtcacacttcggcaacccaacaatcccaaaggcatc tttgcaaaaatcatggcattcaaaaagcatccgaaaggctcgatgattagagcacggatc atgtctgtcatggaccaaaaagaactttgcgggaagtccaagtggcaattgcgcaagcac gtctccctaagcacttctatccgagagttcgctgccttgaaaggtctgccatggtatgaa tccagccttttgtcggatattatggggggacgaagcgctatcatgccgaaactatcgact gagaaaatcgaggatacaatgaagtgtctgagcctgaacgaaccacaggcgaaagccgtc cttggagctttggaggtcaaaggatttacacttatccaaggccctccaggtacaggtaaa actaaaactatcagtggtttagtgggcagatggatgtctgaacgcaagataccgatatca gttgatggccaaccccccgtcaagcccaagttgcttgtatgcgcccccagcaatgccgct atcgatgaagtctgtaaacgtctgatccttggagtgcccaaccctgacggcggtcaatat aatccgagtattgttagagtgggtattgacgcttctgtcaatatcgccgtgaaggatgtg tctttagacagtcttgtcgaagcagtagtcagcaatagctctggaaggaacattggaggg gaatatgggaggattcaggcggagctggatgatgtcaagcagcagatcaaggacaagcag gaagcgattaagttggctcaagatcatgatgaaaagcggaaggtcctggaagacgaatat catgccctgatcactcgccgtacacagcttggtcaagcatcctccaaagcaaaggatgcc gctagagacgcaacccgccatctcgacggtgctcgacgagcggctagggatcagattctg aaggatgctgatattatctgtgctactctctccggtgcaggtcatgatacattagccgcc catacctttgagacagtgatcattgacgaagctgctcaagccatagaaatgagttgcctg attcccttgaaatacgggtgtaaacgatgtatcatggttggagatcccaatcaattacct ccaactacattcagtgccaatgctgaaaagcttcagtacaatgagagtctgttcgttcgc atgacaaaacgtgacgcctctcatgttcagctactaagcattcaatatcgaatgcatccc ttcatctccgagcttccttcgaaggtgttctatcacggtcagctcaaagacgggcccagc atggcgaaaaagactgcggctatttggcatcagcggaacatttttggaccatatcgattt ttcaatatcgaaggcacggaaataaagacgggtacatccaccaagaatcctgcggaggcc cttgctgcagtcgaattataccgccgtttgaacgccgatttcgggacaagagtgaatctt gcaatgagaattggagtgatctcaatgtacagggaacagctatgggagttgaagcgaaaa tttactgaggcttttggttccacaattttggaactcgttgaattcaacactgttgacggt ttccaaggtcaagagaaagacatcatcatattgtcttgtgttcggtccgggcccaatcta aaacatatcggttttctgaaagacaccaggcgaatgaacgtcgcactcactcgtgccaag agttcgttgtttatctttgggaatgggcctactttggagcgaagcgatgaacgatggaag attatcgtccaggacgcaagagacagaggtttcttcatcaattatgattccactacgttc aacgcagctgttttagaacctccaccctcggttaagaaaaggggatctgtctcgaaatcc aaggcttccccaggagcgccccgatctacaaccgtgcctgacggcttgctgcctccaaaa gacctggctgctgacatatcgaccccttccaaggtcaaacgagaggctagtgttgagctt tctaaggagaaaaaaaagaagcgaaagacgtctgatggcttatcacgagctgaagaacca acttctcgtgtagctgttaccgccactgtaccctcttctagattatcctctgaatctgcc atgtccgctgtgaaacatgcggaagatagtccacagctctcttcctccaaaccgccccca ctcaggataccacttcctccgcagccttctaacttcccgaaaatggcacgaccccatccg ccgccacccgaagatgtgctcttcatcaagaagaagaaaaagcgaccaaacaagtaa

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