KEGG   Cryptococcus deuterogattii: CNBG_4427
Entry
CNBG_4427         CDS       T09796                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
cdeu  Cryptococcus deuterogattii
Pathway
cdeu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cdeu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CNBG_4427
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cdeu03021]
    CNBG_4427
   03036 Chromosome and associated proteins [BR:cdeu03036]
    CNBG_4427
Transcription machinery [BR:cdeu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     CNBG_4427
   Coactivators
    SAGA/TFTC/STAGA complex
     CNBG_4427
Chromosome and associated proteins [BR:cdeu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     CNBG_4427
    STAGA complex
     CNBG_4427
    TFTC complex
     CNBG_4427
    SAGA complex
     CNBG_4427
    SLIK complex
     CNBG_4427
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 TFIID_NTD2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_Aladin Beta-prop_SCAP ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_WDR41 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_EIPR1 WD_LRWD1 RMC1_N Tricorn_2nd Beta-prop_DCAF12 DUF7165 CTLH LisH
Other DBs
NCBI-GeneID: 88180644
NCBI-ProteinID: XP_062884324
LinkDB
Position
10:215799..218876
AA seq 780 aa
MSQSPDPSSVRGGAQGHLAPRASTPAQQAPLTDSKLLRQFVMEYLQSHGFDKALEKLTEQ
VEDANSGVAANAIASGDADVPKEGADGKTMTGEQGGEREAIFRAPGPVPLESNIKRNIPQ
AQAVSASTMSDRITPEFEAQAKYIIEQLQKKVEAVHEEGGDEKEKELKDGVPVDGAMVDV
SEKVAGYEAYRRWVDGGLDVWKAELDNLSFPLFVLLFLDAIRSGFLKTAREFFQKHSAHH
RELHPQDISSLSSVSTEEHIKRNSFCARILSEKYVVPLSRNAYDLLLQWLSGASLDDEWE
AGLHSAPGRQKEAIKLIVVSHLNITVHNDSAPLDKVTLATKSGLIPSSLPPNTNIDAFNT
ATQLKLGPPPMTEKLKEQVTRTLQDEGEAQAVNGDANGDIDMTSPHPTNELVVKLEPETE
RDPSVISPDESETLPPIPAVFRIADLKREIEAIKDRRKMIRLGPSGSGASAGFGVLPSVV
AFTLFDHGENANSVEFSRDSSLMAVGSSESCVRLWSLKGDKLKKKAVDMEGNLVEDEGLP
MRKLIGHSGPVYSLSFDPLYGSAGPPSTLLSSSQDGSVRLWSLDTYSNLVVYRGHGKDPV
WDVEWGPMGVYFASASRDRTARLWSSDRVAPLRMYTGHLSDVNCVKFHPNSLYLATASTD
TSCRLWDVQRGACVRLFLGHTDSVTTLSISPDGKTLASAGLDSSIWLWDLGSARPIKKME
GHTGAVTSLSFSAESSVLVSGGLDGTVRCWDVKSAGGRGVWMGCLVVGMPEEGRREVGYR
NT seq 2343 nt   +upstreamnt  +downstreamnt
atgtctcagtccccagacccatcctctgtaaggggtggcgcccaagggcatctagctccc
agagcatcaactcccgcccaacaagctcctctcacagactcaaagctcctccgccaattt
gtcatggaatacctccaatcccacggttttgacaaggccctcgagaagcttactgagcag
gtagaagatgctaattcgggcgtggcagcgaatgcgattgcttcgggtgatgcggatgtc
cccaaggaaggtgcggatgggaagacaatgacaggtgaacaaggcggagaaagagaagcc
attttccgtgctcctggtcctgttcccttggaatccaacatcaaacgtaacattccccag
gcccaagccgtttccgcatctacaatgtctgatcggatcactcccgaattcgaagctcaa
gcaaaatacattattgagcagcttcagaaaaaggtcgaggctgtccatgaggagggtggg
gatgagaaagagaaggagctgaaagatggggtaccggttgatggagcgatggtggatgtc
agtgagaaagtggctggatacgaggcgtacagaagatgggtagatggaggattggatgtt
tggaaggctgaattggacaatctgtcattcccgcttttcgtcctcttatttttagacgcg
atacgttctggtttcctcaagacagctcgtgaattcttccaaaagcacagcgcccaccat
cgcgagcttcatcctcaggatatttcctcattatcatcagtatcaactgaagaacacata
aaacgaaactctttctgtgctagaatactgagcgaaaaatacgttgttcccttatctcgc
aacgcctatgatttgcttttacagtggctgtctggagcgagcttggatgatgaatgggaa
gctggtctccacagtgcacccgggagacaaaaagaggcaatcaagttgatagttgttagc
catttaaacataactgtccacaacgattctgcgcccctcgataaagtcacattagccact
aaatcgggtctcatcccatcgtccctcccacccaataccaacattgatgctttcaacact
gctactcaactgaaactcggtccaccgccaatgaccgaaaaactaaaggagcaagtcacg
aggactctgcaggacgaaggggaggcacaggctgttaacggtgatgcgaacggcgatatt
gatatgacttcgccccacccaaccaacgaacttgttgtcaaactcgaacccgagactgaa
cgtgacccctctgtgatcagccctgacgaatccgaaacgctgccgcctatccccgctgtc
tttcgcatagcagacctcaagcgggaaatagaagcgatcaaagatagacgcaagatgatt
cgtctaggtccttctggatcaggagcatcagcgggcttcggcgtcttaccgagtgtggta
gcgtttacgttgtttgaccatggtgaaaatgccaactcggtagaattctccagggatagt
agtttgatggctgttgggagttcggaaagctgtgtgaggctttggagtttaaaaggcgac
aagttgaaaaagaaggcggtagatatggaagggaatttggtggaagatgaagggttgccg
atgaggaaactgataggtcattccgggccggtctattcactttcgtttgatcccttgtat
ggctccgccggtccaccttccactcttttatcgtcttcgcaagatggatctgtccgactt
tggtccctggatacgtactcaaacttggttgtgtacagagggcacgggaaagatcctgtt
tgggatgtggagtggggtcctatgggggtgtactttgcgagtgccagtagggatcgaacg
gcgagactgtggagttcagacagggttgcgccattgaggatgtacaccgggcatttatcg
gatgtaaactgcgtcaaattccatcccaactcgctctaccttgccacagcatctaccgac
acctcttgtcgattatgggacgtccaacggggtgcgtgcgtgcgcctcttcctcggacat
acggacagcgtcacaacgctctccatctccccggatggcaagacgctcgcgtctgcaggg
ctggactcgtctatctggctttgggacttgggctccgcccggccgatcaagaagatggaa
ggtcacacgggcgcggtgacgagtctaagtttctcggctgagagttcggtcttggtttcc
ggtggtttggatgggacggtgaggtgttgggatgtgaagagtgcaggagggagaggagtg
tggatgggatgtttggtggtggggatgccagaagaggggaggagagaggtgggttaccga
tga

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