Cryptococcus deuterogattii: CNBG_4427
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Entry
CNBG_4427 CDS
T09796
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CNBG_4427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdeu03021
]
CNBG_4427
03036 Chromosome and associated proteins [BR:
cdeu03036
]
CNBG_4427
Transcription machinery [BR:
cdeu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CNBG_4427
Coactivators
SAGA/TFTC/STAGA complex
CNBG_4427
Chromosome and associated proteins [BR:
cdeu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
CNBG_4427
STAGA complex
CNBG_4427
TFTC complex
CNBG_4427
SAGA complex
CNBG_4427
SLIK complex
CNBG_4427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
TFIID_NTD2
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
Beta-prop_SCAP
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_DCAF4
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_Vps41
WD_LRWD1
Nbas_N
Beta-prop_DCAF12
DUF7165
CTLH
Beta-prop_VPS8
LisH
Motif
Other DBs
NCBI-GeneID:
88180644
NCBI-ProteinID:
XP_062884324
LinkDB
All DBs
Position
10:215799..218876
Genome browser
AA seq
780 aa
AA seq
DB search
MSQSPDPSSVRGGAQGHLAPRASTPAQQAPLTDSKLLRQFVMEYLQSHGFDKALEKLTEQ
VEDANSGVAANAIASGDADVPKEGADGKTMTGEQGGEREAIFRAPGPVPLESNIKRNIPQ
AQAVSASTMSDRITPEFEAQAKYIIEQLQKKVEAVHEEGGDEKEKELKDGVPVDGAMVDV
SEKVAGYEAYRRWVDGGLDVWKAELDNLSFPLFVLLFLDAIRSGFLKTAREFFQKHSAHH
RELHPQDISSLSSVSTEEHIKRNSFCARILSEKYVVPLSRNAYDLLLQWLSGASLDDEWE
AGLHSAPGRQKEAIKLIVVSHLNITVHNDSAPLDKVTLATKSGLIPSSLPPNTNIDAFNT
ATQLKLGPPPMTEKLKEQVTRTLQDEGEAQAVNGDANGDIDMTSPHPTNELVVKLEPETE
RDPSVISPDESETLPPIPAVFRIADLKREIEAIKDRRKMIRLGPSGSGASAGFGVLPSVV
AFTLFDHGENANSVEFSRDSSLMAVGSSESCVRLWSLKGDKLKKKAVDMEGNLVEDEGLP
MRKLIGHSGPVYSLSFDPLYGSAGPPSTLLSSSQDGSVRLWSLDTYSNLVVYRGHGKDPV
WDVEWGPMGVYFASASRDRTARLWSSDRVAPLRMYTGHLSDVNCVKFHPNSLYLATASTD
TSCRLWDVQRGACVRLFLGHTDSVTTLSISPDGKTLASAGLDSSIWLWDLGSARPIKKME
GHTGAVTSLSFSAESSVLVSGGLDGTVRCWDVKSAGGRGVWMGCLVVGMPEEGRREVGYR
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtccccagacccatcctctgtaaggggtggcgcccaagggcatctagctccc
agagcatcaactcccgcccaacaagctcctctcacagactcaaagctcctccgccaattt
gtcatggaatacctccaatcccacggttttgacaaggccctcgagaagcttactgagcag
gtagaagatgctaattcgggcgtggcagcgaatgcgattgcttcgggtgatgcggatgtc
cccaaggaaggtgcggatgggaagacaatgacaggtgaacaaggcggagaaagagaagcc
attttccgtgctcctggtcctgttcccttggaatccaacatcaaacgtaacattccccag
gcccaagccgtttccgcatctacaatgtctgatcggatcactcccgaattcgaagctcaa
gcaaaatacattattgagcagcttcagaaaaaggtcgaggctgtccatgaggagggtggg
gatgagaaagagaaggagctgaaagatggggtaccggttgatggagcgatggtggatgtc
agtgagaaagtggctggatacgaggcgtacagaagatgggtagatggaggattggatgtt
tggaaggctgaattggacaatctgtcattcccgcttttcgtcctcttatttttagacgcg
atacgttctggtttcctcaagacagctcgtgaattcttccaaaagcacagcgcccaccat
cgcgagcttcatcctcaggatatttcctcattatcatcagtatcaactgaagaacacata
aaacgaaactctttctgtgctagaatactgagcgaaaaatacgttgttcccttatctcgc
aacgcctatgatttgcttttacagtggctgtctggagcgagcttggatgatgaatgggaa
gctggtctccacagtgcacccgggagacaaaaagaggcaatcaagttgatagttgttagc
catttaaacataactgtccacaacgattctgcgcccctcgataaagtcacattagccact
aaatcgggtctcatcccatcgtccctcccacccaataccaacattgatgctttcaacact
gctactcaactgaaactcggtccaccgccaatgaccgaaaaactaaaggagcaagtcacg
aggactctgcaggacgaaggggaggcacaggctgttaacggtgatgcgaacggcgatatt
gatatgacttcgccccacccaaccaacgaacttgttgtcaaactcgaacccgagactgaa
cgtgacccctctgtgatcagccctgacgaatccgaaacgctgccgcctatccccgctgtc
tttcgcatagcagacctcaagcgggaaatagaagcgatcaaagatagacgcaagatgatt
cgtctaggtccttctggatcaggagcatcagcgggcttcggcgtcttaccgagtgtggta
gcgtttacgttgtttgaccatggtgaaaatgccaactcggtagaattctccagggatagt
agtttgatggctgttgggagttcggaaagctgtgtgaggctttggagtttaaaaggcgac
aagttgaaaaagaaggcggtagatatggaagggaatttggtggaagatgaagggttgccg
atgaggaaactgataggtcattccgggccggtctattcactttcgtttgatcccttgtat
ggctccgccggtccaccttccactcttttatcgtcttcgcaagatggatctgtccgactt
tggtccctggatacgtactcaaacttggttgtgtacagagggcacgggaaagatcctgtt
tgggatgtggagtggggtcctatgggggtgtactttgcgagtgccagtagggatcgaacg
gcgagactgtggagttcagacagggttgcgccattgaggatgtacaccgggcatttatcg
gatgtaaactgcgtcaaattccatcccaactcgctctaccttgccacagcatctaccgac
acctcttgtcgattatgggacgtccaacggggtgcgtgcgtgcgcctcttcctcggacat
acggacagcgtcacaacgctctccatctccccggatggcaagacgctcgcgtctgcaggg
ctggactcgtctatctggctttgggacttgggctccgcccggccgatcaagaagatggaa
ggtcacacgggcgcggtgacgagtctaagtttctcggctgagagttcggtcttggtttcc
ggtggtttggatgggacggtgaggtgttgggatgtgaagagtgcaggagggagaggagtg
tggatgggatgtttggtggtggggatgccagaagaggggaggagagaggtgggttaccga
tga
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