Cryptococcus deuterogattii: CNBG_5074
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Entry
CNBG_5074 CDS
T09796
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03440
Homologous recombination
cdeu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CNBG_5074
03450 Non-homologous end-joining
CNBG_5074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdeu03032
]
CNBG_5074
03400 DNA repair and recombination proteins [BR:
cdeu03400
]
CNBG_5074
DNA replication proteins [BR:
cdeu03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
CNBG_5074
DNA repair and recombination proteins [BR:
cdeu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
CNBG_5074
BRCA1-C complex
CNBG_5074
NHEJ (non-homologous end-joining)
MRX complex
CNBG_5074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_21
SMC_N
AAA_15
SbcC_Walker_B
ABC_tran
AAA_29
AAA_16
OrsD
CATRA-C
Roc
DUF3502
GTP_EFTU
Strep_SA_rep
Motif
Other DBs
NCBI-GeneID:
88181242
NCBI-ProteinID:
XP_062884922
LinkDB
All DBs
Position
13:complement(349766..355135)
Genome browser
AA seq
1329 aa
AA seq
DB search
MASLNKLAIRGIRSFDDKHVQVIEFYSPLTVIVGHNGSGKTTIIECLKYATTGDMPPNTK
GGAFVHDPKMAGEKEVKAQVRLRFWNAKRERMTATRNLQVTTKKTGQLTMKTLEGILAKT
DIGDGNGKRNTISTKCSEMDEEVPYLLGVSRAILENVIFCHQEESNWPLSEPAALKKKFD
DIFEATKYTKALDNIKTLRKERMAELKVDKERLKFLKADKDKAERLRKDLEESISQENRK
QAELDNLKERYETIKIRNAEFYEEATLFRQIYEQSKSLKEKKKMYEDNRKHSKLDMQEMN
ESTEELLHMQQNFDAHLETLKMQLEEKEDAKKMKESLLEELRADERILVNKQGGLVAHRQ
AYERNLREREAVIRQIAKAHNLVGYDYSPLEDSKVAEFVNKIYEMVRKAENDVKKLQAEN
NRKERELQDELDRLSTMKASAQATKKSKEDQIIKLTEKIRTSETTFHSISNPSVELELNQ
NKLSELEADLAKFQTEIADAKYDEKINQRGLLIRQKELERDSISAELAVLNRKADSRAKL
DLQRNELEGKNSQITTLLKTHEAKFIELVEADIHDFKPEDIEDKVIGAISRKDRDLMQEE
NSASALNRDHSQVQASLSRAREELTLMKREVQSMQREIEAAIYNVNQPAEGEEVPAEEAK
NLAEAFDICRSEIETVQRAIMDKQGSRVVWEGLLATVKADGVCEACNRGIKHEEKNAVTR
HMETKIRQLMEAEQAGVDAEIEVEKSWTEILDTLIRVEPHEARIQDLQRRVIPRLETQIK
EGEEKLRSLAKEVDDSKASIQKLKSASRDLQNLKSTASYINHLYLEIRDLKANVKRLQTE
LESSGSSKTVEEVQKDVDRVAQVIKILSREQQDFSSEKELKVNAFRAIQDEIGRKSLHIG
RLKAQQDKRKMEEEALNDMQNTLGALRNELQDLDQTVQTAEAPWKEKNETLGRFKTERAN
TEKEASTQVRMYQSSLGEIEGKHKACQAYVAEGNDRKIRENEITMSDIKRQISHSNDARA
ALEAEIFALSSELSKSESLKANIRSNLKYREDGKKIEMVQAELDELDLESAAESRAKFNK
EYKGMLDEETEAQGLMAITQGGLLEMRANRQKMEKTLKMDYKNIDKEHKEQLIKTTISEY
ANNDLEKYAKALDNAILKYHSIKMDEINDTIGHLWNKTYQGTDIDGIRIVSDHDEASTST
RKSYNYRVVMVKNEVELDMRGRCSAGQKVLASIIIRLALAESFGQGCGVLALDEPTTNLD
QENINALAESLAEIIRERRQQANFQLIVITHDEGFLQRLAEQDVVEYYWRVSRDASQKSV
LERQRVGRG
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctcaataagcttgccattcgaggcattcgttcttttgatgacaagcatgtc
caagtcatagaattctattcaccacttactgttatcgttgggcataatggtagtggaaag
accactatcattgaatgccttaaatacgctaccaccggtgacatgccgcccaacactaag
ggcggagccttcgttcatgatccaaagatggctggtgagaaagaagtcaaggctcaagtc
cgtttaagattttggaatgccaagcgggagcgtatgacggcaactcgaaatttacaagtg
acgacgaagaagactggccagttgaccatgaagacgctcgaaggaatcctggccaagacg
gatattggcgatgggaatgggaagagaaataccatctctacgaaatgttcagaaatggac
gaagaagtaccatatttgttgggcgtgtcaagggccatccttgagaacgtcattttctgc
catcaggaagagtccaattggccactgtctgagccggccgcgttaaagaagaaatttgat
gacatcttcgaagctaccaagtatacgaaagctttggacaatatcaaaactttaaggaaa
gaacgaatggcggagctcaaggtcgataaggagaggctcaagttcctcaaggctgataag
gacaaagcagagcgtttgcgcaaggatttggaagagtcaatttcccaagagaaccgtaaa
caagcagaactagacaacctcaaagaacgatacgagactatcaagattcgcaacgccgaa
ttttacgaggaagcgacgttattccgacaaatctatgaacagtccaaatctttgaaggag
aaaaaaaagatgtatgaggacaatcgaaagcattcaaagttggatatgcaagagatgaat
gaatcgactgaggagctcctccatatgcagcaaaacttcgacgctcaccttgaaactctt
aaaatgcagctagaagagaaggaagatgcgaaaaagatgaaggagtctctgttggaggag
cttcgtgcagacgagagaattcttgtcaataagcagggtggattggttgctcatcgtcaa
gcgtatgagcgtaatttgagagagcgcgaagctgtgataaggcagattgccaaagctcat
aatctggtcggatatgattactctcctttggaagattcaaaagttgcagaattcgtgaat
aagatctatgagatggtgagaaaggcagaaaatgatgtgaagaaacttcaggcggaaaat
aatagaaaggaaagagaattgcaagacgaacttgatcggctgtcaacaatgaaagcgtct
gcccaagccacgaaaaagagcaaagaagatcaaatcattaaacttacggagaagattcgc
acgtccgaaacaacctttcattccatctctaatccctctgtcgaacttgagctcaaccaa
aataagctttcagagttggaagcagacctcgcaaaattccaaactgagatcgctgatgcg
aaatatgacgagaagattaatcaaagaggcctcttaattaggcaaaaggaactggaaagg
gatagtatcagtgcagagttggctgtgttgaataggaaggccgactcgagggcgaagtta
gatctgcaaaggaatgagctggagggcaaaaattcacaaataacaaccttattaaaaacc
catgaggctaagtttatagagcttgtcgaggcagatatacatgatttcaagccggaagac
atagaggataaggtcattggtgccatcagtcgtaaggacagagatctcatgcaagaagag
aacagtgcatccgctctcaacagggatcattcccaagttcaagcgtcgctcagtcgagct
cgagaggaactcacactcatgaagcgagaagttcaaagcatgcaacgcgagattgaggct
gcaatttacaatgtcaaccagccggctgaaggagaggaagtaccggcagaggaggccaag
aacttggcagaggcctttgatatctgtcgtagcgagattgaaactgtgcagcgagcgatt
atggacaagcaaggcagcagggtcgtatgggaagggttgctggcaacggtcaaagcagat
ggagtttgtgaagcttgtaaccgtggaatcaagcacgaggaaaagaatgccgtcactaga
catatggaaacaaaaatccggcaacttatggaagccgagcaagctggggttgacgctgaa
attgaggtggaaaagtcttggactgagattctcgatacccttatcagagttgagccccat
gaagcgaggatccaggacctgcagagaagagtcatccctcgcttggagacgcagatcaag
gaaggagaggaaaaacttcgctcattggcgaaagaggttgatgactcaaaagcatcaatt
cagaagcttaaatccgcctctcgtgacttacaaaacctcaagtccactgcatcctacatt
aatcatttgtaccttgagatcagagatctgaaagcgaacgtgaaaagactacagacggaa
ttagagagctctggtagctctaagacggtagaggaggtacaaaaggacgtggatcgggtg
gcccaggtaatcaaaatcctgtctcgagagcagcaagacttttcctccgaaaaagagctt
aaggtcaatgcttttcgggcgattcaagacgaaatcggacgcaagagtctccatattggt
aggctcaaggctcaacaggacaaaagaaaaatggaggaggaagccttaaacgatatgcag
aatactctgggggcgctccgcaacgaacttcaggatctggatcagactgttcagaccgct
gaggctccttggaaggaaaagaatgaaacactcgggagattcaaaacagaacgggcaaat
acggagaaagaagctagcactcaagttaggatgtatcagtccagcttaggggagattgaa
gggaagcacaaagcttgtcaggcgtatgtggcggagggtaatgacagaaagatccgagag
aacgagataaccatgtctgacatcaaacgtcaaatttcacattccaatgacgctcgcgcg
gccctcgaagctgaaatatttgctctatcatcagaactctcaaaatctgaatcacttaaa
gcaaatataagaagtaacctgaagtaccgcgaagacggaaagaaaatcgagatggtccaa
gcagagcttgacgaattggatctggagagtgctgccgaaagtagagccaagttcaataaa
gagtacaaggggatgttggacgaagagacagaagctcagggtctaatggcaatcacccaa
ggaggtttgctggaaatgagggcaaatcgccaaaaaatggagaaaactttgaagatggac
tacaagaacatcgataaagaacacaaggaacaattgatcaagaccacaattagcgagtac
gcgaataatgaccttgagaaatacgcaaaggccctggacaacgcgatcctcaagtatcac
tccatcaagatggatgagatcaacgatactattggtcatctttggaacaagacttatcaa
gggactgatatcgacgggatccgaattgtctccgatcatgacgaggcgtcgacaagtact
cgtaagagctataattatagagtggtcatggtaaagaatgaagtggagctggacatgaga
ggaagatgctctgctggtcagaaagtattagctagtatcatcattaggttagctctggcg
gagagctttggacaaggctgtggtgttttggcccttgacgaaccgactaccaatttagat
caagagaatatcaacgccttagccgaatccttggccgagatcattcgggaacgccgacaa
caagccaacttccagcttatcgtaatcacacacgacgaagggtttttgcagcgtttggca
gagcaggatgtagttgagtattactggcgggtgtcaagagatgcttcgcagaagagtgtg
ttagaaagacagagagtaggcagagggtag
DBGET
integrated database retrieval system
