Cryptococcus deuterogattii: CNBG_5279
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Entry
CNBG_5279 CDS
T09796
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
cdeu
Cryptococcus deuterogattii
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdeu03041
]
CNBG_5279
Spliceosome [BR:
cdeu03041
]
Common components
Common spliceosomal components
General mRNP proteins
CNBG_5279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_3
Nup35_RRM_2
RRM_9
Motif
Other DBs
NCBI-GeneID:
88181435
NCBI-ProteinID:
XP_062885115
UniProt:
A0A095DF74
LinkDB
All DBs
Position
6:288985..291245
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AA seq
615 aa
AA seq
DB search
MSETPPRSFHQSTNGGDKTPELTTKREKRHREDDEEDDRDVSGRSHRYRREDDREYDRDR
TDRGDRERDRERRHRHRRRDETEEERRERHRRREEETEEEREERHRRRREREVRERERER
EREDDYRRGSREVSVGRPSSHRDRSRESHRSYRSHRDRDEMPPIRPMNRESRDIAEERRE
NDRRREMHFADLERDGRMRSPPPRRRRLSPEYGGPRGPPARRPPPPPRDPATALIEEVDS
EARSIFVSQLSARMTSQVLGLFFEDKLGRGAVRDARVVTDKVARRSKGIGYVELDSVDLV
NKALALSGTVVMGIPINIMLTEAERNHSGTELITATALASNARSHGGGGRSSVPFTQNYP
PLSTGLALPPGLDPDAHKDAAIPYHRLFVSNLAFSLTADDVRQVFEPFGEIEFVDLHMDV
SGLRKGTAYVQFKDVKSAQMALDAMAGFDLAGRLIKVQTIQERGTYQTPDLIEDSGNYGT
RLDANQRQQLMFKLARTEPNVNLSLSAPKISGSQSKVPAMDPTPRIVVHNMFNPEEETER
NWDLDLAEDVKGEVESKYGKVKRIKVEKMSAGEVYIEFVDTDSAIKAVKGLNGRFFGGRQ
LQAGYITEALFNAHL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaactccacctagatctttccaccagtccaccaatggtggcgacaagactcca
gagctcaccactaaacgtgagaaacgccatcgtgaggatgatgaagaagatgatcgtgac
gtatccggcaggtctcatcgatatcgtcgtgaagacgaccgcgaatacgaccgtgacaga
actgataggggagacagggaacgtgacagagagaggcgacaccggcaccgacgccgtgac
gaaactgaagaggaacgtagggaacgccatcgtcgacgtgaggaggagactgaggaagag
cgcgaggagaggcatcgacgaaggagggagcgtgaagtgagagaacgcgagcgtgagcga
gagagagaggacgattatcgtcgcggatctagagaagtgtctgtgggtagaccctcgagc
catagggacagatcaagagagagtcaccgcagttacaggagccatcgcgacagggatgaa
atgccccccattaggcctatgaacagggaatccagggacattgctgaagagcgcagggaa
aatgacaggcgtagggaaatgcactttgcagaccttgaacgtgatggtcgaatgcggtct
ccgcccccacgacgacgtcgtctttcgcctgagtatggaggtcctcgcgggccgcctgct
cgccgtccgcctcctcctcctcgtgacccagctacggctttgattgaagaggtagactct
gaagctcgttccatctttgtctcacaactttctgctaggatgacttcccaggttcttggc
cttttcttcgaagacaaacttggcaggggtgctgtcagagatgctagagtagtgaccgac
aaggttgctaggaggtccaaaggtatcggatacgttgaattggatagtgttgatctcgta
aacaaggctcttgctctttctgggacggtcgtcatgggtattcctattaatatcatgctt
accgaggcagagagaaaccattccggtactgaactcatcactgctactgctcttgccagt
aacgcacgatctcatggtggtggcggtcgttcttctgttcctttcactcagaactatcct
cctctctccaccggtctcgctcttcccccaggccttgaccccgacgctcacaaggacgct
gctatcccttatcaccgtcttttcgtctccaatctcgcattctctctgaccgctgatgat
gtgaggcaggtgttcgagccgttcggcgagattgaatttgtagacctccacatggacgtt
agcgggctgagaaaaggtacagcttacgtccagtttaaggatgtcaagtctgcgcaaatg
gcacttgacgcgatggctggatttgatctcgcaggacgtctcatcaaggttcagactatt
caagaacgcggtacctatcagactccagacttgattgaggatagtggcaactatggcacc
cgacttgacgccaaccagaggcagcagctcatgttcaagcttgccaggactgaacccaat
gtcaatttgtcgttgtctgcccccaagatcagcggttctcagtcgaaggtaccggcgatg
gaccctactcctcgaatcgttgttcataacatgtttaatcccgaagaagagaccgagaga
aactgggatttggacctcgccgaagacgtcaagggcgaagttgagtccaagtacggcaag
gtcaagaggattaaggttgagaaaatgtctgcaggcgaggtgtacattgaattcgttgac
actgattccgccatcaaagctgtcaagggcctcaatggtcgattctttggtggacgccag
ttgcaagcaggatacatcaccgaggctttgttcaacgcccacctctaa
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