Cryptococcus deuterogattii: CNBG_5350
Help
Entry
CNBG_5350 CDS
T09796
Name
(RefSeq) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cdeu
Cryptococcus deuterogattii
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdeu03016
]
CNBG_5350
Enzymes [BR:
cdeu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
CNBG_5350
Transfer RNA biogenesis [BR:
cdeu03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
CNBG_5350
Prokaryotic type
CNBG_5350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
PDEase_II
Lactamase_B_4
Motif
Other DBs
NCBI-GeneID:
88181505
NCBI-ProteinID:
XP_062885185
LinkDB
All DBs
Position
6:<490558..>492362
Genome browser
AA seq
568 aa
AA seq
DB search
MHLRITELTLPVFDTADGTLNRLHQSSLKLANISRIFITHLHVDHVLGLVPVLTTVMTGT
MATKEATQKIKELGLKKQPTFHLYGPSGLRNLVRTILNITQANLSGVFAIHELLQDGEEP
SAGCREDEIHPNEAVGMDMRADEDGVWKVVLQEGNGKNGKGWKVSAGPIHHRVPSLGYVL
QEPTPRLPLDTATLIPLLQSNSEALAALDPPVKHPLSLLSHLTSLPAPPPFTLPSGDIIS
PPEASGILPRKIVIFGDCSGGTKNHIFRSMCEDASLLVHECTNAAIPQAIQREEKGQRAR
TRDLEPSLMRSQGVSPGQSAPSSGYSSANSPSTPNGLQAPKLDKESADEIKRGEVKKKAQ
SRGHSTPDEVGEFARVIRARRVVVNHFSAMFPSPRYPTAAALPSILSSICSFPYPVPRPL
PHTSLPPPLPVPLNSKYPSELHVRVIMQSLADQILDKCASFSLSDEDLDKPPRGKTGMVI
PARDFMHLPIPSHELNALEIEDVRSCKELADKVTEEWKKHGGIWIENGEEEWIGVEKEVK
VTGWRFKKVAKESDEWVVDRVKEDSNGN
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcacttacgaattacagaactcactttgccagtttttgacactgccgacggcacactc
aaccgtctgcatcagtcatctctcaagttggccaacatctctcgtattttcattactcat
ctccatgtcgaccatgtcctagggcttgtgcccgttttaactaccgtcatgactggcaca
atggctactaaagaggcaactcaaaagattaaggagcttggtttgaagaaacagcctact
ttccatttgtatggaccatcagggttaaggaacctggtcaggaccatattgaacatcaca
caagcaaatctatctggggtgttcgccatccatgagctgttacaagatggcgaagaacct
tcagcaggttgccgtgaagatgaaatacacccaaatgaggcagttgggatggatatgaga
gccgatgaggatggcgtttggaaagtggtgcttcaagagggtaatgggaagaacgggaaa
gggtggaaagtcagcgcaggtccaatacaccatagagtaccatccctcggctacgtcctg
caggagcccacgcctcgacttccattagacactgcaaccctcatacctttgttacagtcc
aactccgaggctttggctgctcttgatcctccggttaagcatcccttgtctcttttatcg
caccttacatctctcccggccccgccgccattcacgctcccctcgggggacatcatatcc
cctccagaggcctctggtatcctcccacgcaagatagttatttttggagattgttctgga
gggacaaagaatcatattttcaggtcgatgtgtgaagacgctagtctcttggtgcatgaa
tgtaccaatgcggcgatccctcaggccatacagagagaggagaaaggacaaagagctcgc
acaagggatctagagccaagtttaatgcgttcccaaggtgtatcacccggacaatctgct
ccttcttcagggtatagttctgctaattccccctctactcccaatgggctgcaggcgccg
aagttggataaggaaagtgcggatgagatcaaaagaggcgaagttaagaagaaagctcaa
agtaggggacattcaactcctgatgaggtgggggagtttgcaagggtaatcagggcccga
agagttgttgtcaaccacttttctgccatgttcccatcaccgagatatccaacagctgca
gcccttccatcgattctttcctcgatctgttcatttccataccctgttcctcgtcctctt
ccacatacttctcttccgccaccacttcccgtcccactcaattcaaaatatcctagtgag
ctgcacgtacgcgtaatcatgcaatcgttggcggaccagatattagataaatgtgcctcc
ttttcgctttccgatgaagatctggataaaccgccgagaggcaaaacagggatggtgatc
cccgccagagattttatgcacctccccataccatctcatgagcttaatgctttggagatt
gaggatgtccggtcatgcaaagaattagcagacaaggtgacggaggaatggaagaagcat
gggggtatctggattgaaaatggtgaagaagagtggataggagtcgaaaaggaggtaaaa
gtgacaggatggagattcaaaaaggtggccaaggaaagcgatgaatgggtggtcgataga
gtaaaggaggatagcaatggtaattag
DBGET
integrated database retrieval system
